RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 NEXN-AS1Q8NBZ9 246 aa12.34□□□□□ -0.43
COL9A2-205ENST00000461118 FAM210AQ96ND0 272 aa12.34□□□□□ -0.43
COL9A2-205ENST00000461118 F5H697 171 aa12.33□□□□□ -0.44
COL9A2-205ENST00000461118 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
COL9A2-205ENST00000461118 LYZL1Q6UWQ5 148 aa12.33□□□□□ -0.44
COL9A2-205ENST00000461118 EIF5A2Q9GZV4 153 aaKnown RBP12.33□□□□□ -0.44
COL9A2-205ENST00000461118 RNASE7Q9H1E1 156 aaKnown RBP12.33□□□□□ -0.44
COL9A2-205ENST00000461118 RPP21Q9H633 154 aaKnown RBP12.33□□□□□ -0.44
COL9A2-205ENST00000461118 SRRM2Q9UQ35 2752 aaKnown RBP12.32□□□□□ -0.44
COL9A2-205ENST00000461118 EREGO14944 169 aa12.32□□□□□ -0.44
COL9A2-205ENST00000461118 CNFNQ9BYD5 112 aa12.32□□□□□ -0.44
COL9A2-205ENST00000461118 PGPEP1Q9NXJ5 209 aa12.32□□□□□ -0.44
COL9A2-205ENST00000461118 FLG2Q5D862 2391 aaPredicted RBP12.32□□□□□ -0.44
COL9A2-205ENST00000461118 A0A087WTM6 91 aa12.31□□□□□ -0.44
COL9A2-205ENST00000461118 CTRLP40313 264 aa12.31□□□□□ -0.44
COL9A2-205ENST00000461118 FAM231DQ6ZW35 169 aa12.31□□□□□ -0.44
COL9A2-205ENST00000461118 NIT1Q86X76 327 aa12.31□□□□□ -0.44
COL9A2-205ENST00000461118 NTF3P20783 257 aa12.3□□□□□ -0.44
COL9A2-205ENST00000461118 Q8N3U1 123 aa12.3□□□□□ -0.44
COL9A2-205ENST00000461118 M0QY20 66 aa12.29□□□□□ -0.44
COL9A2-205ENST00000461118 TRGC1P0CF51 173 aa12.29□□□□□ -0.44
COL9A2-205ENST00000461118 Q5VSD8 79 aa12.29□□□□□ -0.44
COL9A2-205ENST00000461118 TEX261Q6UWH6 196 aa12.29□□□□□ -0.44
COL9A2-205ENST00000461118 CHCHD7Q9BUK0 85 aa12.29□□□□□ -0.44
COL9A2-205ENST00000461118 TRBV6-8A0A0A6YYG3 113 aa12.28□□□□□ -0.44
COL9A2-205ENST00000461118 SRP19P09132 144 aaKnown RBP12.28□□□□□ -0.44
COL9A2-205ENST00000461118 CEBPGP53567 150 aa12.28□□□□□ -0.44
COL9A2-205ENST00000461118 DAZ4Q86SG3 579 aaKnown RBP12.28□□□□□ -0.44
COL9A2-205ENST00000461118 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.28□□□□□ -0.44
COL9A2-205ENST00000461118 SMIM7Q9BQ49 75 aa12.28□□□□□ -0.44
COL9A2-205ENST00000461118 Q9HAA7 133 aa12.28□□□□□ -0.44
COL9A2-205ENST00000461118 DAZ3Q9NR90 486 aaKnown RBP12.28□□□□□ -0.44
COL9A2-205ENST00000461118 TRAV8-3A0A0A6YYJ7 113 aa12.27□□□□□ -0.45
COL9A2-205ENST00000461118 LRCOL1A6NCL2 159 aa12.27□□□□□ -0.45
COL9A2-205ENST00000461118 H7C1H1 209 aa12.27□□□□□ -0.45
COL9A2-205ENST00000461118 PSCAO43653 123 aa12.27□□□□□ -0.45
COL9A2-205ENST00000461118 GATCO43716 136 aaKnown RBP12.27□□□□□ -0.45
COL9A2-205ENST00000461118 KRTAP10-1P60331 282 aa12.27□□□□□ -0.45
COL9A2-205ENST00000461118 TMEM97Q5BJF2 176 aa12.27□□□□□ -0.45
COL9A2-205ENST00000461118 CDPF1Q6NVV7 123 aa12.27□□□□□ -0.45
COL9A2-205ENST00000461118 GTSF1Q8WW33 167 aa12.27□□□□□ -0.45
COL9A2-205ENST00000461118 DNAJC30Q96LL9 226 aa12.27□□□□□ -0.45
COL9A2-205ENST00000461118 DPH3P1Q9H4G8 78 aa12.27□□□□□ -0.45
COL9A2-205ENST00000461118 URGCP-MRPS24S4R325 110 aa12.27□□□□□ -0.45
COL9A2-205ENST00000461118 A8MWL6 223 aa12.26□□□□□ -0.45
COL9A2-205ENST00000461118 MGPP08493 103 aa12.26□□□□□ -0.45
COL9A2-205ENST00000461118 FOXA3P55318 350 aaPredicted RBP12.26□□□□□ -0.45
COL9A2-205ENST00000461118 CT83Q5H943 113 aa12.26□□□□□ -0.45
COL9A2-205ENST00000461118 SUMO4Q6EEV6 95 aa12.26□□□□□ -0.45
COL9A2-205ENST00000461118 LINC01551Q86U37 167 aa12.26□□□□□ -0.45
COL9A2-205ENST00000461118 TM2D2Q9BX73 214 aa12.26□□□□□ -0.45
COL9A2-205ENST00000461118 ZNF727A8MUV8 499 aa12.25□□□□□ -0.45
COL9A2-205ENST00000461118 TWIST1Q15672 202 aa12.25□□□□□ -0.45
COL9A2-205ENST00000461118 A0A087WX48 190 aa12.24□□□□□ -0.45
COL9A2-205ENST00000461118 ELOBQ15370 118 aa12.23□□□□□ -0.45
COL9A2-205ENST00000461118 FAM74A3Q4VXF1 159 aa12.23□□□□□ -0.45
COL9A2-205ENST00000461118 RASL11AQ6T310 242 aa12.23□□□□□ -0.45
COL9A2-205ENST00000461118 NTM-AS1Q6ZSK4 140 aa12.23□□□□□ -0.45
COL9A2-205ENST00000461118 KCNIP4Q6PIL6 250 aa12.22□□□□□ -0.45
COL9A2-205ENST00000461118 FRZBQ92765 325 aa12.22□□□□□ -0.45
COL9A2-205ENST00000461118 SMDT1Q9H4I9 107 aa12.22□□□□□ -0.45
COL9A2-205ENST00000461118 NIT2Q9NQR4 276 aa12.22□□□□□ -0.45
COL9A2-205ENST00000461118 OSTCQ9NRP0 149 aa12.22□□□□□ -0.45
COL9A2-205ENST00000461118 KLK12Q9UKR0 248 aa12.22□□□□□ -0.45
COL9A2-205ENST00000461118 COX11Q9Y6N1 276 aa12.22□□□□□ -0.45
COL9A2-205ENST00000461118 FAM231BA6NCW3 169 aa12.21□□□□□ -0.45
COL9A2-205ENST00000461118 PKIAP61925 76 aa12.21□□□□□ -0.45
COL9A2-205ENST00000461118 GFRA4Q9GZZ7 299 aa12.21□□□□□ -0.45
COL9A2-205ENST00000461118 C9JQL5 133 aa12.2□□□□□ -0.46
COL9A2-205ENST00000461118 TMEM262E9PQX1 116 aa12.2□□□□□ -0.46
COL9A2-205ENST00000461118 SMR3BP02814 79 aaPredicted RBP12.2□□□□□ -0.46
COL9A2-205ENST00000461118 PEA15Q15121 130 aa12.2□□□□□ -0.46
COL9A2-205ENST00000461118 TMEM241Q24JQ0 296 aa12.2□□□□□ -0.46
COL9A2-205ENST00000461118 TSKUQ8WUA8 353 aa12.2□□□□□ -0.46
COL9A2-205ENST00000461118 RMI2Q96E14 147 aa12.2□□□□□ -0.46
COL9A2-205ENST00000461118 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
COL9A2-205ENST00000461118 TRBV25-1A0A075B6N4 114 aa12.19□□□□□ -0.46
COL9A2-205ENST00000461118 IQCJQ1A5X6 159 aa12.19□□□□□ -0.46
COL9A2-205ENST00000461118 ATRAIDQ6UW56 229 aa12.19□□□□□ -0.46
COL9A2-205ENST00000461118 SMIM15Q7Z3B0 74 aa12.19□□□□□ -0.46
COL9A2-205ENST00000461118 Q8N814 137 aa12.19□□□□□ -0.46
COL9A2-205ENST00000461118 NTN5Q8WTR8 489 aaPredicted RBP12.19□□□□□ -0.46
COL9A2-205ENST00000461118 CHCHD5Q9BSY4 110 aa12.19□□□□□ -0.46
COL9A2-205ENST00000461118 SRSF3P84103 164 aaKnown RBP12.18□□□□□ -0.46
COL9A2-205ENST00000461118 Q0VG73 95 aa12.18□□□□□ -0.46
COL9A2-205ENST00000461118 MPV17L2Q567V2 206 aa12.18□□□□□ -0.46
COL9A2-205ENST00000461118 GATD1Q8NB37 220 aa12.18□□□□□ -0.46
COL9A2-205ENST00000461118 IGHV1-24A0A0C4DH33 117 aa12.17□□□□□ -0.46
COL9A2-205ENST00000461118 RPL23P62829 140 aaKnown RBP12.17□□□□□ -0.46
COL9A2-205ENST00000461118 C15orf54Q8N8G6 183 aa12.17□□□□□ -0.46
COL9A2-205ENST00000461118 ISOC2Q96AB3 205 aa12.17□□□□□ -0.46
COL9A2-205ENST00000461118 UBE2WQ96B02 151 aa12.17□□□□□ -0.46
COL9A2-205ENST00000461118 V9GYV3 84 aa12.17□□□□□ -0.46
COL9A2-205ENST00000461118 DNAH8Q96JB1 4490 aa12.17□□□□□ -0.46
COL9A2-205ENST00000461118 HIGD1CA8MV81 97 aa12.16□□□□□ -0.46
COL9A2-205ENST00000461118 ENHOQ6UWT2 76 aa12.16□□□□□ -0.46
COL9A2-205ENST00000461118 BORCS7Q96B45 105 aa12.16□□□□□ -0.46
COL9A2-205ENST00000461118 NAT8Q9UHE5 227 aa12.16□□□□□ -0.46
COL9A2-205ENST00000461118 A0A1B0GUT8 65 aa12.15□□□□□ -0.46
COL9A2-205ENST00000461118 HAMPP81172 84 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms