RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 GOLT1AQ6ZVE7 132 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 GTF2H5Q6ZYL4 71 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 MIR17HGQ75NE6 70 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 NUP35Q8NFH5 326 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 TMEM191AQ9H0A3 160 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 NPVFQ9HCQ7 196 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 TMEM167BQ9NRX6 74 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 TRAPPC2LQ9UL33 140 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 CACNA1EQ15878 2313 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 SDK1Q7Z5N4 2213 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 FAM186AA6NE01 2351 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 A0A1W2PRE2 83 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 HIGD1CA8MV81 97 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 H3BRM9 83 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 H3BUT2 72 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 GNG7O60262 68 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 LEPROTL1O95214 131 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 IGLV3-19P01714 112 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 CCL3P10147 92 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 COX8AP10176 69 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 TCTAP57738 103 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 DEFB133Q30KQ1 61 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 LINC01545Q5VT33 79 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 Q6ZQT7 251 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 AAED1Q7RTV5 226 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 BPIFA4PQ86YQ2 179 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 RPRMLQ8N4K4 120 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 OR5A1Q8NGJ0 315 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 OR10AG1Q8NH19 301 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 H1FXQ92522 213 aaKnown RBP1.71□□□□□ -2.14
HPS3-203ENST00000460822 CHCHD1Q96BP2 118 aaKnown RBP1.71□□□□□ -2.14
HPS3-203ENST00000460822 PMCHL2Q9BQD1 86 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 PROK2Q9HC23 129 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 SS18L2Q9UHA2 77 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 MPC1Q9Y5U8 109 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 CFAP47Q6ZTR5 3102 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 DSCAMO60469 2012 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 DMDP11532 3685 aa1.71□□□□□ -2.14
HPS3-203ENST00000460822 IGKV1D-37A0A075B6S9 117 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 TRAV3A0A0B4J244 114 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 A0A1W2PPM0 123 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 UBE2L6O14933 153 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 IGHV3-53P01767 116 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 APOA2P02652 100 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 CCL5P13501 91 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 CD24P25063 80 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 FOXA3P55318 350 aaPredicted RBP1.7□□□□□ -2.14
HPS3-203ENST00000460822 HBBP68871 147 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 RTL8BQ17RB0 113 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 LGALS9BQ3B8N2 356 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 LGALS9CQ6DKI2 356 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 SPINT4Q6UDR6 99 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 SSX8Q7RTT4 187 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 Q8IYB0 196 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 TSTD1Q8NFU3 115 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 AP1S3Q96PC3 154 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 NABP2Q9BQ15 211 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 NAA38Q9BRA0 125 aaKnown RBP1.7□□□□□ -2.14
HPS3-203ENST00000460822 UPK3BQ9BT76 320 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 C11orf68Q9H3H3 251 aaKnown RBP1.7□□□□□ -2.14
HPS3-203ENST00000460822 RABAC1Q9UI14 185 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 KLK5Q9Y337 293 aaPredicted RBP1.7□□□□□ -2.14
HPS3-203ENST00000460822 HILPDAQ9Y5L2 63 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 SPCS1Q9Y6A9 102 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 DSPP15924 2871 aaKnown RBP1.7□□□□□ -2.14
HPS3-203ENST00000460822 ARFGEF3Q5TH69 2177 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 PRR14LQ5THK1 2151 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 SPENQ96T58 3664 aaKnown RBP1.7□□□□□ -2.14
HPS3-203ENST00000460822 A0A0G2JMM0 328 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 A0A1W2PPB8 328 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 TMEM30CPA0ZSE6 113 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 TMEM189A5PLL7 270 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 LRCOL1A6NCL2 159 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 KIR3DP1A8MWS1 328 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 OR11H12B2RN74 326 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 FNDC10F2Z333 226 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 NCR2O95944 276 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 SLC25A16P16260 332 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 GNG5P63218 68 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 HSD52Q0P140 79 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 OR11H1Q8NG94 326 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 OR11H2Q8NH07 326 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 VSTM2AQ8TAG5 236 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 RAB37Q96AX2 223 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 FAM167A-AS1Q96KT0 104 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 RTL8AQ9BWD3 113 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 LINC00470Q9BZP3 86 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 HSPB8Q9UJY1 196 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 PRNDQ9UKY0 176 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 PRRC2CQ9Y520 2896 aaKnown RBP1.7□□□□□ -2.14
HPS3-203ENST00000460822 PLXNB1O43157 2135 aa1.7□□□□□ -2.14
HPS3-203ENST00000460822 IGLV2-18A0A075B6J9 118 aa1.69□□□□□ -2.14
HPS3-203ENST00000460822 TRAV5A0A0B4J249 113 aa1.69□□□□□ -2.14
HPS3-203ENST00000460822 SPAARA0A1B0GVQ0 90 aa1.69□□□□□ -2.14
HPS3-203ENST00000460822 A0A1B0GW54 56 aa1.69□□□□□ -2.14
HPS3-203ENST00000460822 C19orf71A6NCJ1 209 aa1.69□□□□□ -2.14
HPS3-203ENST00000460822 DEFB108AA8MXU0 73 aa1.69□□□□□ -2.14
HPS3-203ENST00000460822 MRPL33O75394 65 aaKnown RBP1.69□□□□□ -2.14
HPS3-203ENST00000460822 IGHV3-7P01780 117 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms