RNA–Protein interactions for RNA: ENST00000460791.1

NXF3-203, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-203ENST00000460791 CIDEAO60543 219 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 CTRLP40313 264 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 RAB4BP61018 213 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 RNF212Q495C1 297 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 SUMO4Q6EEV6 95 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 WDR73Q6P4I2 378 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 PET117Q6UWS5 81 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 NUP35Q8NFH5 326 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 ATP6V0E2Q8NHE4 81 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 AP1S3Q96PC3 154 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 Q9H8V8 135 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 FAT2Q9NYQ8 4349 aa4.04□□□□□ -1.76
NXF3-203ENST00000460791 TRAV26-2A0A0B4J265 109 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 A0A1B0GUT8 65 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 SCO1O75880 301 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 GAS8-AS1O95177 125 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 TRGC1P0CF51 173 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 CAMPP49913 170 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 MRPL54Q6P161 138 aaKnown RBP4.03□□□□□ -1.76
NXF3-203ENST00000460791 WFDC10BQ8IUB3 73 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 NEXN-AS1Q8NBZ9 246 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 BORCS7Q96B45 105 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 SEC11CQ9BY50 192 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 CDIP1Q9H305 208 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 DPH3P1Q9H4G8 78 aa4.03□□□□□ -1.76
NXF3-203ENST00000460791 MRPS16Q9Y3D3 137 aaKnown RBP4.03□□□□□ -1.76
NXF3-203ENST00000460791 DYNC1H1Q14204 4646 aaKnown RBP4.02□□□□□ -1.77
NXF3-203ENST00000460791 SMIM27A0A1W2PRY6 76 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 C7orf77A4D0Y5 90 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 M0QY20 66 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 SIVA1O15304 175 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 IGHV3-30P01768 117 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 IGHV3-33P01772 117 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 APOC3P02656 99 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 MT-ND4LP03901 98 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 IGHV3-30-3P0DP02 117 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 IGHV3-30-5P0DP03 117 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 FAM3BP58499 235 aaPredicted RBP4.02□□□□□ -1.77
NXF3-203ENST00000460791 UBE2D3P61077 147 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 UBE2D2P62837 147 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 RPL36AP83881 106 aaKnown RBP4.02□□□□□ -1.77
NXF3-203ENST00000460791 RIGQ13278 110 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 OR10J3Q5JRS4 329 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 SMIM15Q7Z3B0 74 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 SH2D6Q7Z4S9 175 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 Q8N3U1 123 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 GATD1Q8NB37 220 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 RPL36ALQ969Q0 106 aaKnown RBP4.02□□□□□ -1.77
NXF3-203ENST00000460791 RPL39LQ96EH5 51 aaKnown RBP4.02□□□□□ -1.77
NXF3-203ENST00000460791 CNFNQ9BYD5 112 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 GFRA4Q9GZZ7 299 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 GTSF1LQ9H1H1 148 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 TNFRSF18Q9Y5U5 241 aa4.02□□□□□ -1.77
NXF3-203ENST00000460791 TRBV7-3A0A075B6L6 115 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 TRBV10-1A0A0K0K1A3 114 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 NBDYA0A0U1RRE5 68 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 SMKR1H3BMG3 65 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 PPP1R2P9O14990 202 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 ATP6V1G1O75348 118 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 NCR2O95944 276 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 LINC00694P0DN24 101 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 PNRC1Q12796 327 aaPredicted RBP4.01□□□□□ -1.77
NXF3-203ENST00000460791 RASL11AQ6T310 242 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 Q6ZR54 194 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 CBLN2Q8IUK8 224 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 AMN1Q8IY45 258 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 RNF185Q96GF1 192 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 KRTAP1-5Q9BYS1 174 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 NAT8BQ9UHF3 227 aa4.01□□□□□ -1.77
NXF3-203ENST00000460791 TRAV8-6A0A0B4J262 113 aa4□□□□□ -1.77
NXF3-203ENST00000460791 A0A1B0GXF2 115 aa4□□□□□ -1.77
NXF3-203ENST00000460791 FAM231BA6NCW3 169 aa4□□□□□ -1.77
NXF3-203ENST00000460791 TMEM262E9PQX1 116 aa4□□□□□ -1.77
NXF3-203ENST00000460791 RAB4AP20338 218 aa4□□□□□ -1.77
NXF3-203ENST00000460791 MALP21145 153 aa4□□□□□ -1.77
NXF3-203ENST00000460791 TIRAPP58753 221 aa4□□□□□ -1.77
NXF3-203ENST00000460791 LELP1Q5T871 98 aa4□□□□□ -1.77
NXF3-203ENST00000460791 YPEL4Q96NS1 127 aa4□□□□□ -1.77
NXF3-203ENST00000460791 UPK3BQ9BT76 320 aa4□□□□□ -1.77
NXF3-203ENST00000460791 TMEM191AQ9H0A3 160 aa4□□□□□ -1.77
NXF3-203ENST00000460791 NIT2Q9NQR4 276 aa4□□□□□ -1.77
NXF3-203ENST00000460791 URGCP-MRPS24S4R325 110 aa4□□□□□ -1.77
NXF3-203ENST00000460791 EPPK1P58107 5090 aaKnown RBP4□□□□□ -1.77
NXF3-203ENST00000460791 PKHD1P08F94 4074 aa4□□□□□ -1.77
NXF3-203ENST00000460791 TGIF2-C20orf24A0A0A6YYL0 155 aa3.99□□□□□ -1.77
NXF3-203ENST00000460791 H7C1H1 209 aa3.99□□□□□ -1.77
NXF3-203ENST00000460791 RTL8CO15255 209 aa3.99□□□□□ -1.77
NXF3-203ENST00000460791 RPS10P46783 165 aaKnown RBP3.99□□□□□ -1.77
NXF3-203ENST00000460791 GAGE6Q13070 117 aa3.99□□□□□ -1.77
NXF3-203ENST00000460791 MRPL51Q4U2R6 128 aaKnown RBP3.99□□□□□ -1.77
NXF3-203ENST00000460791 C1orf134Q5TEV5 83 aa3.99□□□□□ -1.77
NXF3-203ENST00000460791 FAM104BQ5XKR9 115 aa3.99□□□□□ -1.77
NXF3-203ENST00000460791 NTM-AS1Q6ZSK4 140 aa3.99□□□□□ -1.77
NXF3-203ENST00000460791 DAZ4Q86SG3 579 aaKnown RBP3.99□□□□□ -1.77
NXF3-203ENST00000460791 DNAJC30Q96LL9 226 aa3.99□□□□□ -1.77
NXF3-203ENST00000460791 RPS10P5Q9NQ39 176 aa3.99□□□□□ -1.77
NXF3-203ENST00000460791 DAZ3Q9NR90 486 aaKnown RBP3.99□□□□□ -1.77
NXF3-203ENST00000460791 A0A087WWC5 75 aa3.98□□□□□ -1.77
NXF3-203ENST00000460791 TRBV6-8A0A0A6YYG3 113 aa3.98□□□□□ -1.77
NXF3-203ENST00000460791 DNAH10OSP0CZ25 163 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms