RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
SCAMP4-206ENST00000460767 SPANXN1Q5VSR9 72 aa9.17□□□□□ -0.94
SCAMP4-206ENST00000460767 LYZL1Q6UWQ5 148 aa9.17□□□□□ -0.94
SCAMP4-206ENST00000460767 AP1S3Q96PC3 154 aa9.17□□□□□ -0.94
SCAMP4-206ENST00000460767 TMEM70Q9BUB7 260 aa9.17□□□□□ -0.94
SCAMP4-206ENST00000460767 DNAH8Q96JB1 4490 aa9.16□□□□□ -0.94
SCAMP4-206ENST00000460767 UBR4Q5T4S7 5183 aa9.16□□□□□ -0.94
SCAMP4-206ENST00000460767 TRBV7-3A0A075B6L6 115 aa9.16□□□□□ -0.94
SCAMP4-206ENST00000460767 GAGE12JA6NER3 117 aa9.16□□□□□ -0.94
SCAMP4-206ENST00000460767 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
SCAMP4-206ENST00000460767 GAGE1Q13065 139 aa9.16□□□□□ -0.94
SCAMP4-206ENST00000460767 GAGE4Q13068 117 aa9.16□□□□□ -0.94
SCAMP4-206ENST00000460767 GAGE5Q13069 117 aa9.16□□□□□ -0.94
SCAMP4-206ENST00000460767 GAGE13Q4V321 117 aa9.16□□□□□ -0.94
SCAMP4-206ENST00000460767 NEXN-AS1Q8NBZ9 246 aa9.16□□□□□ -0.94
SCAMP4-206ENST00000460767 IGHV3-38A0A0C4DH36 116 aa9.15□□□□□ -0.94
SCAMP4-206ENST00000460767 ZNF727A8MUV8 499 aa9.15□□□□□ -0.94
SCAMP4-206ENST00000460767 M0QY20 66 aa9.15□□□□□ -0.94
SCAMP4-206ENST00000460767 GCSHP23434 173 aa9.15□□□□□ -0.94
SCAMP4-206ENST00000460767 FUSP35637 526 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCAMP4-206ENST00000460767 FAM74A3Q4VXF1 159 aa9.15□□□□□ -0.94
SCAMP4-206ENST00000460767 OSTCQ9NRP0 149 aa9.15□□□□□ -0.94
SCAMP4-206ENST00000460767 SRRM2Q9UQ35 2752 aaKnown RBP9.15□□□□□ -0.95
SCAMP4-206ENST00000460767 FAM231BA6NCW3 169 aa9.14□□□□□ -0.95
SCAMP4-206ENST00000460767 NTF3P20783 257 aa9.14□□□□□ -0.95
SCAMP4-206ENST00000460767 EVI2AP22794 236 aa9.14□□□□□ -0.95
SCAMP4-206ENST00000460767 IFITM2Q01629 132 aa9.14□□□□□ -0.95
SCAMP4-206ENST00000460767 ISOC2Q96AB3 205 aa9.14□□□□□ -0.95
SCAMP4-206ENST00000460767 A0A087WWC5 75 aa9.13□□□□□ -0.95
SCAMP4-206ENST00000460767 RPL23P62829 140 aaKnown RBP9.13□□□□□ -0.95
SCAMP4-206ENST00000460767 GFRA4Q9GZZ7 299 aa9.13□□□□□ -0.95
SCAMP4-206ENST00000460767 V9GYV3 84 aa9.13□□□□□ -0.95
SCAMP4-206ENST00000460767 A8MWL6 223 aa9.12□□□□□ -0.95
SCAMP4-206ENST00000460767 IBA57-AS1B1ANH7 110 aa9.12□□□□□ -0.95
SCAMP4-206ENST00000460767 GATCO43716 136 aaKnown RBP9.12□□□□□ -0.95
SCAMP4-206ENST00000460767 CEBPGP53567 150 aa9.12□□□□□ -0.95
SCAMP4-206ENST00000460767 RPL36AP83881 106 aaKnown RBP9.12□□□□□ -0.95
SCAMP4-206ENST00000460767 PEA15Q15121 130 aa9.12□□□□□ -0.95
SCAMP4-206ENST00000460767 Q8N3U1 123 aa9.12□□□□□ -0.95
SCAMP4-206ENST00000460767 TSKUQ8WUA8 353 aa9.12□□□□□ -0.95
SCAMP4-206ENST00000460767 RPL36ALQ969Q0 106 aaKnown RBP9.12□□□□□ -0.95
SCAMP4-206ENST00000460767 TPPP3Q9BW30 176 aa9.12□□□□□ -0.95
SCAMP4-206ENST00000460767 TNFRSF18Q9Y5U5 241 aa9.12□□□□□ -0.95
SCAMP4-206ENST00000460767 TRAV9-2A0A087WT02 112 aa9.11□□□□□ -0.95
SCAMP4-206ENST00000460767 TRAV8-6A0A0B4J262 113 aa9.11□□□□□ -0.95
SCAMP4-206ENST00000460767 TRGC1P0CF51 173 aa9.11□□□□□ -0.95
SCAMP4-206ENST00000460767 ZNF56Q15929 161 aa9.11□□□□□ -0.95
SCAMP4-206ENST00000460767 TMEM241Q24JQ0 296 aa9.11□□□□□ -0.95
SCAMP4-206ENST00000460767 CLLU1Q5K131 121 aa9.11□□□□□ -0.95
SCAMP4-206ENST00000460767 SUMO4Q6EEV6 95 aa9.11□□□□□ -0.95
SCAMP4-206ENST00000460767 C10orf126Q8N4M7 172 aa9.11□□□□□ -0.95
SCAMP4-206ENST00000460767 NTN5Q8WTR8 489 aaPredicted RBP9.11□□□□□ -0.95
SCAMP4-206ENST00000460767 HMCN2Q8NDA2 5059 aa9.1□□□□□ -0.95
SCAMP4-206ENST00000460767 SSTP61278 116 aa9.1□□□□□ -0.95
SCAMP4-206ENST00000460767 LAGE3Q14657 143 aa9.1□□□□□ -0.95
SCAMP4-206ENST00000460767 OR10J3Q5JRS4 329 aa9.1□□□□□ -0.95
SCAMP4-206ENST00000460767 NTM-AS1Q6ZSK4 140 aa9.1□□□□□ -0.95
SCAMP4-206ENST00000460767 NIT1Q86X76 327 aa9.1□□□□□ -0.95
SCAMP4-206ENST00000460767 DPH3P1Q9H4G8 78 aa9.1□□□□□ -0.95
SCAMP4-206ENST00000460767 NAT8Q9UHE5 227 aa9.1□□□□□ -0.95
SCAMP4-206ENST00000460767 TRBV6-8A0A0A6YYG3 113 aa9.09□□□□□ -0.95
SCAMP4-206ENST00000460767 PLA2G1BP04054 148 aaKnown RBP9.09□□□□□ -0.95
SCAMP4-206ENST00000460767 SMIM17P0DL12 118 aa9.09□□□□□ -0.95
SCAMP4-206ENST00000460767 DNAJC30Q96LL9 226 aa9.09□□□□□ -0.95
SCAMP4-206ENST00000460767 HIGD1CA8MV81 97 aa9.08□□□□□ -0.96
SCAMP4-206ENST00000460767 TWIST1Q15672 202 aa9.08□□□□□ -0.96
SCAMP4-206ENST00000460767 DAZ4Q86SG3 579 aaKnown RBP9.08□□□□□ -0.96
SCAMP4-206ENST00000460767 DEFB104AQ8WTQ1 72 aa9.08□□□□□ -0.96
SCAMP4-206ENST00000460767 DAZ3Q9NR90 486 aaKnown RBP9.08□□□□□ -0.96
SCAMP4-206ENST00000460767 SMIM27A0A1W2PRY6 76 aa9.07□□□□□ -0.96
SCAMP4-206ENST00000460767 H7C1H1 209 aa9.07□□□□□ -0.96
SCAMP4-206ENST00000460767 RASL11AQ6T310 242 aa9.07□□□□□ -0.96
SCAMP4-206ENST00000460767 GATD1Q8NB37 220 aa9.07□□□□□ -0.96
SCAMP4-206ENST00000460767 NUP35Q8NFH5 326 aa9.07□□□□□ -0.96
SCAMP4-206ENST00000460767 CHCHD7Q9BUK0 85 aa9.07□□□□□ -0.96
SCAMP4-206ENST00000460767 A0A1B0GUT8 65 aa9.06□□□□□ -0.96
SCAMP4-206ENST00000460767 F5H697 171 aa9.06□□□□□ -0.96
SCAMP4-206ENST00000460767 HAMPP81172 84 aa9.06□□□□□ -0.96
SCAMP4-206ENST00000460767 IQCJQ1A5X6 159 aa9.06□□□□□ -0.96
SCAMP4-206ENST00000460767 PGLYRP4Q96LB8 373 aa9.06□□□□□ -0.96
SCAMP4-206ENST00000460767 TMEM191AQ9H0A3 160 aa9.06□□□□□ -0.96
SCAMP4-206ENST00000460767 NIT2Q9NQR4 276 aa9.06□□□□□ -0.96
SCAMP4-206ENST00000460767 IGLV5-52A0A0A0MRZ9 124 aa9.05□□□□□ -0.96
SCAMP4-206ENST00000460767 LRCOL1A6NCL2 159 aa9.05□□□□□ -0.96
SCAMP4-206ENST00000460767 ADIRFQ15847 76 aa9.05□□□□□ -0.96
SCAMP4-206ENST00000460767 ATRAIDQ6UW56 229 aa9.05□□□□□ -0.96
SCAMP4-206ENST00000460767 C15orf54Q8N8G6 183 aa9.05□□□□□ -0.96
SCAMP4-206ENST00000460767 RNF185Q96GF1 192 aa9.05□□□□□ -0.96
SCAMP4-206ENST00000460767 IGHV3-30P01768 117 aa9.04□□□□□ -0.96
SCAMP4-206ENST00000460767 IGHV3-33P01772 117 aa9.04□□□□□ -0.96
SCAMP4-206ENST00000460767 MGPP08493 103 aa9.04□□□□□ -0.96
SCAMP4-206ENST00000460767 IGHV3-30-3P0DP02 117 aa9.04□□□□□ -0.96
SCAMP4-206ENST00000460767 IGHV3-30-5P0DP03 117 aa9.04□□□□□ -0.96
SCAMP4-206ENST00000460767 TMEM97Q5BJF2 176 aa9.04□□□□□ -0.96
SCAMP4-206ENST00000460767 Q6ZSA8 131 aa9.04□□□□□ -0.96
SCAMP4-206ENST00000460767 TRBV6-5A0A0K0K1A5 114 aa9.03□□□□□ -0.96
SCAMP4-206ENST00000460767 RAB14P61106 215 aa9.03□□□□□ -0.96
SCAMP4-206ENST00000460767 PLA2G2DQ9UNK4 145 aa9.03□□□□□ -0.96
SCAMP4-206ENST00000460767 TRAV26-2A0A0B4J265 109 aa9.02□□□□□ -0.97
SCAMP4-206ENST00000460767 GAS8-AS1O95177 125 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms