RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 IGHV3-30P01768 117 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 IGHV3-33P01772 117 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 MGPP08493 103 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 IGHV3-30-3P0DP02 117 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 IGHV3-30-5P0DP03 117 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 UBE2D3P61077 147 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 UBE2D2P62837 147 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 SMIM15Q7Z3B0 74 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 OR10G8Q8NGN5 311 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 GTSF1Q8WW33 167 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 GFRA4Q9GZZ7 299 aa14.02□□□□□ -0.17
VARS-218ENST00000459667 H7C1H1 209 aa14.01□□□□□ -0.17
VARS-218ENST00000459667 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.01□□□□□ -0.17
VARS-218ENST00000459667 NEXN-AS1Q8NBZ9 246 aa14.01□□□□□ -0.17
VARS-218ENST00000459667 TSKUQ8WUA8 353 aa14.01□□□□□ -0.17
VARS-218ENST00000459667 DPH3P1Q9H4G8 78 aa14.01□□□□□ -0.17
VARS-218ENST00000459667 FAM231BA6NCW3 169 aa14□□□□□ -0.17
VARS-218ENST00000459667 IFITM2Q01629 132 aa14□□□□□ -0.17
VARS-218ENST00000459667 PGLYRP4Q96LB8 373 aa14□□□□□ -0.17
VARS-218ENST00000459667 DNAH11Q96DT5 4516 aa14□□□□□ -0.17
VARS-218ENST00000459667 FOXA3P55318 350 aaPredicted RBP13.99□□□□□ -0.17
VARS-218ENST00000459667 DYNC1H1Q14204 4646 aaKnown RBP13.98□□□□□ -0.17
VARS-218ENST00000459667 HIGD1CA8MV81 97 aa13.97□□□□□ -0.17
VARS-218ENST00000459667 IBA57-AS1B1ANH7 110 aa13.97□□□□□ -0.17
VARS-218ENST00000459667 SPATA12Q7Z6I5 190 aa13.97□□□□□ -0.17
VARS-218ENST00000459667 Q8N3U1 123 aa13.97□□□□□ -0.17
VARS-218ENST00000459667 V9GYV3 84 aa13.97□□□□□ -0.17
VARS-218ENST00000459667 A0A1B0GUT8 65 aa13.95□□□□□ -0.18
VARS-218ENST00000459667 C16orf90A8MZG2 172 aa13.95□□□□□ -0.18
VARS-218ENST00000459667 SUMO4Q6EEV6 95 aa13.95□□□□□ -0.18
VARS-218ENST00000459667 DNAJC30Q96LL9 226 aa13.95□□□□□ -0.18
VARS-218ENST00000459667 Q9HAA7 133 aa13.95□□□□□ -0.18
VARS-218ENST00000459667 M0QY20 66 aa13.94□□□□□ -0.18
VARS-218ENST00000459667 LAGE3Q14657 143 aa13.94□□□□□ -0.18
VARS-218ENST00000459667 NAT8BQ9UHF3 227 aa13.94□□□□□ -0.18
VARS-218ENST00000459667 URGCP-MRPS24S4R325 110 aa13.94□□□□□ -0.18
VARS-218ENST00000459667 KIAA1109Q2LD37 5005 aa13.94□□□□□ -0.18
VARS-218ENST00000459667 EREGO14944 169 aa13.93□□□□□ -0.18
VARS-218ENST00000459667 PNRC1Q12796 327 aaPredicted RBP13.93□□□□□ -0.18
VARS-218ENST00000459667 TMEM97Q5BJF2 176 aa13.93□□□□□ -0.18
VARS-218ENST00000459667 RASL11AQ6T310 242 aa13.93□□□□□ -0.18
VARS-218ENST00000459667 UQCC3Q6UW78 93 aa13.93□□□□□ -0.18
VARS-218ENST00000459667 DAZ4Q86SG3 579 aaKnown RBP13.93□□□□□ -0.18
VARS-218ENST00000459667 NIT1Q86X76 327 aa13.93□□□□□ -0.18
VARS-218ENST00000459667 DAZ3Q9NR90 486 aaKnown RBP13.93□□□□□ -0.18
VARS-218ENST00000459667 TRBV6-8A0A0A6YYG3 113 aa13.92□□□□□ -0.18
VARS-218ENST00000459667 KRTAP10-2P60368 255 aa13.92□□□□□ -0.18
VARS-218ENST00000459667 RIGQ13278 110 aa13.92□□□□□ -0.18
VARS-218ENST00000459667 PSCAO43653 123 aa13.91□□□□□ -0.18
VARS-218ENST00000459667 NUP35Q8NFH5 326 aa13.91□□□□□ -0.18
VARS-218ENST00000459667 HERC2O95714 4834 aa13.9□□□□□ -0.18
VARS-218ENST00000459667 A0A087WTM6 91 aa13.9□□□□□ -0.18
VARS-218ENST00000459667 PPP1R2P9O14990 202 aa13.9□□□□□ -0.18
VARS-218ENST00000459667 KCNIP4Q6PIL6 250 aa13.9□□□□□ -0.18
VARS-218ENST00000459667 FRZBQ92765 325 aa13.9□□□□□ -0.18
VARS-218ENST00000459667 NIT2Q9NQR4 276 aa13.9□□□□□ -0.18
VARS-218ENST00000459667 A0A087WX48 190 aa13.89□□□□□ -0.19
VARS-218ENST00000459667 SMIM27A0A1W2PRY6 76 aa13.89□□□□□ -0.19
VARS-218ENST00000459667 CHCHD7Q9BUK0 85 aa13.89□□□□□ -0.19
VARS-218ENST00000459667 TMEM191AQ9H0A3 160 aa13.88□□□□□ -0.19
VARS-218ENST00000459667 TRAV8-3A0A0A6YYJ7 113 aa13.87□□□□□ -0.19
VARS-218ENST00000459667 PKIAP61925 76 aa13.87□□□□□ -0.19
VARS-218ENST00000459667 TMEM262E9PQX1 116 aa13.86□□□□□ -0.19
VARS-218ENST00000459667 MT-ND4LP03901 98 aa13.86□□□□□ -0.19
VARS-218ENST00000459667 NTM-AS1Q6ZSK4 140 aa13.86□□□□□ -0.19
VARS-218ENST00000459667 GATD1Q8NB37 220 aa13.86□□□□□ -0.19
VARS-218ENST00000459667 CHCHD5Q9BSY4 110 aa13.86□□□□□ -0.19
VARS-218ENST00000459667 TM2D2Q9BX73 214 aa13.86□□□□□ -0.19
VARS-218ENST00000459667 KLK12Q9UKR0 248 aa13.86□□□□□ -0.19
VARS-218ENST00000459667 TRAV26-2A0A0B4J265 109 aa13.85□□□□□ -0.19
VARS-218ENST00000459667 A0A1B0GW15 77 aa13.85□□□□□ -0.19
VARS-218ENST00000459667 ELOBQ15370 118 aa13.85□□□□□ -0.19
VARS-218ENST00000459667 COMMD7Q86VX2 200 aa13.85□□□□□ -0.19
VARS-218ENST00000459667 ANAPC16Q96DE5 110 aa13.85□□□□□ -0.19
VARS-218ENST00000459667 TRBV25-1A0A075B6N4 114 aa13.84□□□□□ -0.19
VARS-218ENST00000459667 TMEM218A2RU14 115 aa13.84□□□□□ -0.19
VARS-218ENST00000459667 S100A8P05109 93 aa13.84□□□□□ -0.19
VARS-218ENST00000459667 PGPEP1Q9NXJ5 209 aa13.84□□□□□ -0.19
VARS-218ENST00000459667 LRCOL1A6NCL2 159 aa13.83□□□□□ -0.2
VARS-218ENST00000459667 F8W036 122 aa13.83□□□□□ -0.2
VARS-218ENST00000459667 FUSP35637 526 aaKnown RBP eCLIP13.83□□□□□ -0.2
VARS-218ENST00000459667 MPV17L2Q567V2 206 aa13.83□□□□□ -0.2
VARS-218ENST00000459667 CDPF1Q6NVV7 123 aa13.83□□□□□ -0.2
VARS-218ENST00000459667 IGHV1-24A0A0C4DH33 117 aa13.82□□□□□ -0.2
VARS-218ENST00000459667 IQCJQ1A5X6 159 aa13.82□□□□□ -0.2
VARS-218ENST00000459667 UBE2WQ96B02 151 aa13.82□□□□□ -0.2
VARS-218ENST00000459667 RMI2Q96E14 147 aa13.82□□□□□ -0.2
VARS-218ENST00000459667 MRAP2Q96G30 205 aa13.82□□□□□ -0.2
VARS-218ENST00000459667 LRP1BQ9NZR2 4599 aa13.82□□□□□ -0.2
VARS-218ENST00000459667 DNAH5Q8TE73 4624 aa13.81□□□□□ -0.2
VARS-218ENST00000459667 RYR1P21817 5038 aa13.81□□□□□ -0.2
VARS-218ENST00000459667 LINC00862A6NCI5 91 aa13.8□□□□□ -0.2
VARS-218ENST00000459667 CAMPP49913 170 aa13.8□□□□□ -0.2
VARS-218ENST00000459667 GAGE6Q13070 117 aa13.8□□□□□ -0.2
VARS-218ENST00000459667 COTL1Q14019 142 aa13.8□□□□□ -0.2
VARS-218ENST00000459667 AMN1Q8IY45 258 aa13.8□□□□□ -0.2
VARS-218ENST00000459667 RPL39LQ96EH5 51 aaKnown RBP13.8□□□□□ -0.2
VARS-218ENST00000459667 COX11Q9Y6N1 276 aa13.8□□□□□ -0.2
VARS-218ENST00000459667 IGKV2D-24A0A075B6R9 120 aa13.79□□□□□ -0.2
VARS-218ENST00000459667 ANGP03950 147 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms