RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SSTP61278 116 aa9.58□□□□□ -0.88
HDAC4-205ENST00000454542 TNP2Q05952 138 aa9.58□□□□□ -0.88
HDAC4-205ENST00000454542 TMEM241Q24JQ0 296 aa9.58□□□□□ -0.88
HDAC4-205ENST00000454542 OR10J3Q5JRS4 329 aa9.58□□□□□ -0.88
HDAC4-205ENST00000454542 SUMO4Q6EEV6 95 aa9.58□□□□□ -0.88
HDAC4-205ENST00000454542 C10orf126Q8N4M7 172 aa9.58□□□□□ -0.88
HDAC4-205ENST00000454542 TSKUQ8WUA8 353 aa9.58□□□□□ -0.88
HDAC4-205ENST00000454542 DPH3P1Q9H4G8 78 aa9.58□□□□□ -0.88
HDAC4-205ENST00000454542 TRAV9-2A0A087WT02 112 aa9.57□□□□□ -0.88
HDAC4-205ENST00000454542 MGPP08493 103 aa9.56□□□□□ -0.88
HDAC4-205ENST00000454542 RAB14P61106 215 aa9.56□□□□□ -0.88
HDAC4-205ENST00000454542 LRP1BQ9NZR2 4599 aa9.55□□□□□ -0.88
HDAC4-205ENST00000454542 HIGD1CA8MV81 97 aa9.55□□□□□ -0.88
HDAC4-205ENST00000454542 F5H697 171 aa9.55□□□□□ -0.88
HDAC4-205ENST00000454542 H7C1H1 209 aa9.55□□□□□ -0.88
HDAC4-205ENST00000454542 TWIST1Q15672 202 aa9.55□□□□□ -0.88
HDAC4-205ENST00000454542 ADIRFQ15847 76 aa9.55□□□□□ -0.88
HDAC4-205ENST00000454542 Q8N3U1 123 aa9.55□□□□□ -0.88
HDAC4-205ENST00000454542 C15orf54Q8N8G6 183 aa9.55□□□□□ -0.88
HDAC4-205ENST00000454542 DNAJC30Q96LL9 226 aa9.55□□□□□ -0.88
HDAC4-205ENST00000454542 IBA57-AS1B1ANH7 110 aa9.54□□□□□ -0.88
HDAC4-205ENST00000454542 LAGE3Q14657 143 aa9.54□□□□□ -0.88
HDAC4-205ENST00000454542 RASL11AQ6T310 242 aa9.54□□□□□ -0.88
HDAC4-205ENST00000454542 DAZ4Q86SG3 579 aaKnown RBP9.54□□□□□ -0.88
HDAC4-205ENST00000454542 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
HDAC4-205ENST00000454542 NIT1Q86X76 327 aa9.54□□□□□ -0.88
HDAC4-205ENST00000454542 PGLYRP4Q96LB8 373 aa9.54□□□□□ -0.88
HDAC4-205ENST00000454542 DAZ3Q9NR90 486 aaKnown RBP9.54□□□□□ -0.88
HDAC4-205ENST00000454542 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
HDAC4-205ENST00000454542 A0A1B0GUT8 65 aa9.53□□□□□ -0.88
HDAC4-205ENST00000454542 FRZBQ92765 325 aa9.53□□□□□ -0.88
HDAC4-205ENST00000454542 CHCHD7Q9BUK0 85 aa9.53□□□□□ -0.88
HDAC4-205ENST00000454542 TNFRSF18Q9Y5U5 241 aa9.53□□□□□ -0.88
HDAC4-205ENST00000454542 TMEM97Q5BJF2 176 aa9.52□□□□□ -0.89
HDAC4-205ENST00000454542 NUP35Q8NFH5 326 aa9.52□□□□□ -0.89
HDAC4-205ENST00000454542 SMIM27A0A1W2PRY6 76 aa9.51□□□□□ -0.89
HDAC4-205ENST00000454542 IGHV3-30P01768 117 aa9.51□□□□□ -0.89
HDAC4-205ENST00000454542 IGHV3-33P01772 117 aa9.51□□□□□ -0.89
HDAC4-205ENST00000454542 IGHV3-30-3P0DP02 117 aa9.51□□□□□ -0.89
HDAC4-205ENST00000454542 IGHV3-30-5P0DP03 117 aa9.51□□□□□ -0.89
HDAC4-205ENST00000454542 NTM-AS1Q6ZSK4 140 aa9.51□□□□□ -0.89
HDAC4-205ENST00000454542 GATD1Q8NB37 220 aa9.51□□□□□ -0.89
HDAC4-205ENST00000454542 TMEM191AQ9H0A3 160 aa9.51□□□□□ -0.89
HDAC4-205ENST00000454542 NIT2Q9NQR4 276 aa9.51□□□□□ -0.89
HDAC4-205ENST00000454542 IQCJQ1A5X6 159 aa9.5□□□□□ -0.89
HDAC4-205ENST00000454542 SMIM15Q7Z3B0 74 aa9.5□□□□□ -0.89
HDAC4-205ENST00000454542 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.5□□□□□ -0.89
HDAC4-205ENST00000454542 BORCS7Q96B45 105 aa9.5□□□□□ -0.89
HDAC4-205ENST00000454542 NAT8BQ9UHF3 227 aa9.5□□□□□ -0.89
HDAC4-205ENST00000454542 TRAV26-2A0A0B4J265 109 aa9.49□□□□□ -0.89
HDAC4-205ENST00000454542 PNRC1Q12796 327 aaPredicted RBP9.49□□□□□ -0.89
HDAC4-205ENST00000454542 RNF185Q96GF1 192 aa9.49□□□□□ -0.89
HDAC4-205ENST00000454542 HERC2O95714 4834 aa9.48□□□□□ -0.89
HDAC4-205ENST00000454542 UQCC3Q6UW78 93 aa9.48□□□□□ -0.89
HDAC4-205ENST00000454542 TRBV6-5A0A0K0K1A5 114 aa9.47□□□□□ -0.89
HDAC4-205ENST00000454542 ADCYAP1P18509 176 aa9.47□□□□□ -0.89
HDAC4-205ENST00000454542 PKIAP61925 76 aa9.47□□□□□ -0.89
HDAC4-205ENST00000454542 RIGQ13278 110 aa9.47□□□□□ -0.89
HDAC4-205ENST00000454542 RPL39LQ96EH5 51 aaKnown RBP9.47□□□□□ -0.89
HDAC4-205ENST00000454542 APOBP04114 4563 aaKnown RBP9.46□□□□□ -0.89
HDAC4-205ENST00000454542 TRBV25-1A0A075B6N4 114 aa9.46□□□□□ -0.9
HDAC4-205ENST00000454542 A0A087WTM6 91 aa9.46□□□□□ -0.9
HDAC4-205ENST00000454542 IGHV1-24A0A0C4DH33 117 aa9.46□□□□□ -0.9
HDAC4-205ENST00000454542 MPV17L2Q567V2 206 aa9.46□□□□□ -0.9
HDAC4-205ENST00000454542 URGCP-MRPS24S4R325 110 aa9.46□□□□□ -0.9
HDAC4-205ENST00000454542 A0A087WX48 190 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 TRAV8-3A0A0A6YYJ7 113 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 A0A1B0GW15 77 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 A0A1B0GXF2 115 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 LRCOL1A6NCL2 159 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 GAS8-AS1O95177 125 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 RAB4AP20338 218 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 KRTAP10-2P60368 255 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 KCNIP4Q6PIL6 250 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 ATRAIDQ6UW56 229 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 AMN1Q8IY45 258 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 MRAP2Q96G30 205 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 Q9HAA7 133 aa9.45□□□□□ -0.9
HDAC4-205ENST00000454542 KIAA1109Q2LD37 5005 aa9.44□□□□□ -0.9
HDAC4-205ENST00000454542 PPP1R2P9O14990 202 aa9.44□□□□□ -0.9
HDAC4-205ENST00000454542 ELOBQ15370 118 aa9.44□□□□□ -0.9
HDAC4-205ENST00000454542 SPATA12Q7Z6I5 190 aa9.44□□□□□ -0.9
HDAC4-205ENST00000454542 CHCHD5Q9BSY4 110 aa9.44□□□□□ -0.9
HDAC4-205ENST00000454542 TMEM218A2RU14 115 aa9.43□□□□□ -0.9
HDAC4-205ENST00000454542 SDHAF1A6NFY7 115 aa9.43□□□□□ -0.9
HDAC4-205ENST00000454542 NCR2O95944 276 aa9.43□□□□□ -0.9
HDAC4-205ENST00000454542 RPS10P46783 165 aaKnown RBP9.43□□□□□ -0.9
HDAC4-205ENST00000454542 COTL1Q14019 142 aa9.43□□□□□ -0.9
HDAC4-205ENST00000454542 ANAPC16Q96DE5 110 aa9.43□□□□□ -0.9
HDAC4-205ENST00000454542 KLK12Q9UKR0 248 aa9.43□□□□□ -0.9
HDAC4-205ENST00000454542 RYR1P21817 5038 aa9.43□□□□□ -0.9
HDAC4-205ENST00000454542 HSPG2P98160 4391 aa9.42□□□□□ -0.9
HDAC4-205ENST00000454542 LINC00862A6NCI5 91 aa9.42□□□□□ -0.9
HDAC4-205ENST00000454542 RBX1P62877 108 aa9.42□□□□□ -0.9
HDAC4-205ENST00000454542 HBBP68871 147 aa9.42□□□□□ -0.9
HDAC4-205ENST00000454542 GAGE6Q13070 117 aa9.42□□□□□ -0.9
HDAC4-205ENST00000454542 FAM104BQ5XKR9 115 aa9.42□□□□□ -0.9
HDAC4-205ENST00000454542 ATP5L2Q7Z4Y8 100 aa9.42□□□□□ -0.9
HDAC4-205ENST00000454542 NRACQ8N912 160 aa9.42□□□□□ -0.9
HDAC4-205ENST00000454542 Q8N976 141 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms