RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 A0A0D9SG42 100 aa1.03□□□□□ -2.24
HMGN3P1-201ENST00000453847 OOSP1A8MZH6 123 aa1.03□□□□□ -2.24
HMGN3P1-201ENST00000453847 IFNA17P01571 189 aa1.03□□□□□ -2.24
HMGN3P1-201ENST00000453847 CCL8P80075 99 aa1.03□□□□□ -2.24
HMGN3P1-201ENST00000453847 CATR1Q13166 79 aa1.03□□□□□ -2.24
HMGN3P1-201ENST00000453847 Q96NJ1 140 aa1.03□□□□□ -2.24
HMGN3P1-201ENST00000453847 GNG8Q9UK08 70 aa1.03□□□□□ -2.24
HMGN3P1-201ENST00000453847 KNTC1P50748 2209 aa1.03□□□□□ -2.25
HMGN3P1-201ENST00000453847 A6NIN4 97 aa1.02□□□□□ -2.25
HMGN3P1-201ENST00000453847 SNAPC5O75971 98 aa1.02□□□□□ -2.25
HMGN3P1-201ENST00000453847 TNFP01375 233 aa1.02□□□□□ -2.25
HMGN3P1-201ENST00000453847 PZPP20742 1482 aa1.02□□□□□ -2.25
HMGN3P1-201ENST00000453847 SSBP1Q04837 148 aaKnown RBP1.02□□□□□ -2.25
HMGN3P1-201ENST00000453847 C12orf73Q69YU5 71 aa1.02□□□□□ -2.25
HMGN3P1-201ENST00000453847 ZNF818PQ6ZRF7 136 aa1.02□□□□□ -2.25
HMGN3P1-201ENST00000453847 C4orf33Q8N1A6 199 aa1.02□□□□□ -2.25
HMGN3P1-201ENST00000453847 CGREF1Q99674 301 aa1.02□□□□□ -2.25
HMGN3P1-201ENST00000453847 TRIOBPQ9H2D6 2365 aa1.02□□□□□ -2.25
HMGN3P1-201ENST00000453847 COA4Q9NYJ1 87 aa1.02□□□□□ -2.25
HMGN3P1-201ENST00000453847 CPSF1Q10570 1443 aaKnown RBP1.01□□□□□ -2.25
HMGN3P1-201ENST00000453847 HCG22E2RYF7 251 aa1.01□□□□□ -2.25
HMGN3P1-201ENST00000453847 SPINK13Q1W4C9 94 aa1.01□□□□□ -2.25
HMGN3P1-201ENST00000453847 LINC00312Q9Y6C7 94 aa1.01□□□□□ -2.25
HMGN3P1-201ENST00000453847 PRDM2Q13029 1718 aa1.01□□□□□ -2.25
HMGN3P1-201ENST00000453847 KDM6BO15054 1643 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 MYH8P13535 1937 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 TRAV13-2A0A0B4J235 113 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 APOC4-APOC2K7ER74 178 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 APOC2P02655 101 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 S100A1P23297 94 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 GNG4P50150 75 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 TPPP2P59282 170 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 MRPL54Q6P161 138 aaKnown RBP1□□□□□ -2.25
HMGN3P1-201ENST00000453847 CRCT1Q9UGL9 99 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 FBN3Q75N90 2809 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 LRRC37A3O60309 1634 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 SSC5DA1L4H1 1573 aa1□□□□□ -2.25
HMGN3P1-201ENST00000453847 KTN1Q86UP2 1357 aaKnown RBP0.99□□□□□ -2.25
HMGN3P1-201ENST00000453847 TRBV7-1A0A0A6YYK4 115 aa0.99□□□□□ -2.25
HMGN3P1-201ENST00000453847 RBAKDNA6NC62 111 aa0.99□□□□□ -2.25
HMGN3P1-201ENST00000453847 SIX6O95475 246 aa0.99□□□□□ -2.25
HMGN3P1-201ENST00000453847 EDDM3BP56851 147 aa0.99□□□□□ -2.25
HMGN3P1-201ENST00000453847 SPINK9Q5DT21 86 aa0.99□□□□□ -2.25
HMGN3P1-201ENST00000453847 C6orf52Q5T4I8 152 aa0.99□□□□□ -2.25
HMGN3P1-201ENST00000453847 C9orf153Q5TBE3 101 aa0.99□□□□□ -2.25
HMGN3P1-201ENST00000453847 NRKQ7Z2Y5 1582 aa0.99□□□□□ -2.25
HMGN3P1-201ENST00000453847 HMCN1Q96RW7 5635 aa0.98□□□□□ -2.25
HMGN3P1-201ENST00000453847 TENM1Q9UKZ4 2725 aa0.98□□□□□ -2.25
HMGN3P1-201ENST00000453847 ZNF137PP52743 207 aa0.98□□□□□ -2.25
HMGN3P1-201ENST00000453847 PPP3R1P63098 170 aa0.98□□□□□ -2.25
HMGN3P1-201ENST00000453847 PPP1R1CQ8WVI7 109 aa0.98□□□□□ -2.25
HMGN3P1-201ENST00000453847 F5P12259 2224 aa0.98□□□□□ -2.25
HMGN3P1-201ENST00000453847 ASH1LQ9NR48 2969 aaKnown RBP0.98□□□□□ -2.25
HMGN3P1-201ENST00000453847 PXDNQ92626 1479 aa0.98□□□□□ -2.25
HMGN3P1-201ENST00000453847 FAM74A4Q5TZK3 123 aa0.97□□□□□ -2.25
HMGN3P1-201ENST00000453847 IER3IP1Q9Y5U9 82 aa0.97□□□□□ -2.25
HMGN3P1-201ENST00000453847 V9GYV3 84 aa0.97□□□□□ -2.25
HMGN3P1-201ENST00000453847 ZNF462Q96JM2 2506 aa0.96□□□□□ -2.26
HMGN3P1-201ENST00000453847 DOCK2Q92608 1830 aa0.96□□□□□ -2.26
HMGN3P1-201ENST00000453847 S100PP25815 95 aa0.96□□□□□ -2.26
HMGN3P1-201ENST00000453847 C5orf38Q86SI9 138 aa0.96□□□□□ -2.26
HMGN3P1-201ENST00000453847 C14orf144Q96I85 54 aa0.96□□□□□ -2.26
HMGN3P1-201ENST00000453847 PPP3R2Q96LZ3 170 aa0.96□□□□□ -2.26
HMGN3P1-201ENST00000453847 LINC00474Q9P2X8 69 aa0.96□□□□□ -2.26
HMGN3P1-201ENST00000453847 CC2D2AQ9P2K1 1620 aa0.96□□□□□ -2.26
HMGN3P1-201ENST00000453847 FCGBPQ9Y6R7 5405 aaPredicted RBP0.96□□□□□ -2.26
HMGN3P1-201ENST00000453847 SPHKAPQ2M3C7 1700 aa0.95□□□□□ -2.26
HMGN3P1-201ENST00000453847 IFT172Q9UG01 1749 aa0.95□□□□□ -2.26
HMGN3P1-201ENST00000453847 GVQW2A0A096LPI5 108 aaPredicted RBP0.95□□□□□ -2.26
HMGN3P1-201ENST00000453847 WHAMMP3Q1A5X7 153 aa0.95□□□□□ -2.26
HMGN3P1-201ENST00000453847 SPANXDQ9BXN6 97 aa0.95□□□□□ -2.26
HMGN3P1-201ENST00000453847 ZFYVE16Q7Z3T8 1539 aa0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 TET3O43151 1660 aa0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 GOLGA3Q08378 1498 aa0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 TRGV1A0A0A0MS02 117 aa0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 C8orf59Q8N0T1 100 aaPredicted RBP0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 TSLPQ969D9 159 aa0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 C12orf57Q99622 126 aa0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 WFDC6Q9BQY6 131 aa0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 FAM103A1Q9BTL3 118 aaKnown RBP0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 KRTAP4-1Q9BYQ7 146 aa0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 PPIP5K1Q6PFW1 1433 aa0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 ZMYM4Q5VZL5 1548 aa0.94□□□□□ -2.26
HMGN3P1-201ENST00000453847 MRC1P22897 1456 aa0.93□□□□□ -2.26
HMGN3P1-201ENST00000453847 ATP6V1G2-DDX39BF2Z307 99 aa0.93□□□□□ -2.26
HMGN3P1-201ENST00000453847 MRPS10P82664 201 aaKnown RBP0.93□□□□□ -2.26
HMGN3P1-201ENST00000453847 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.93□□□□□ -2.26
HMGN3P1-201ENST00000453847 COMMD6Q7Z4G1 85 aa0.93□□□□□ -2.26
HMGN3P1-201ENST00000453847 CDK13Q14004 1512 aaKnown RBP0.93□□□□□ -2.26
HMGN3P1-201ENST00000453847 C10orf128Q5T292 105 aa0.92□□□□□ -2.26
HMGN3P1-201ENST00000453847 DPH3P1Q9H4G8 78 aa0.92□□□□□ -2.26
HMGN3P1-201ENST00000453847 PSME4Q14997 1843 aa0.92□□□□□ -2.26
HMGN3P1-201ENST00000453847 C10orf71Q711Q0 1435 aa0.91□□□□□ -2.26
HMGN3P1-201ENST00000453847 MAPKBP1O60336 1514 aa0.91□□□□□ -2.26
HMGN3P1-201ENST00000453847 C20orf202A1L168 122 aa0.91□□□□□ -2.26
HMGN3P1-201ENST00000453847 ACYP2P14621 99 aa0.91□□□□□ -2.26
HMGN3P1-201ENST00000453847 CCL18P55774 89 aa0.91□□□□□ -2.26
HMGN3P1-201ENST00000453847 FXYD6P3P58550 94 aa0.91□□□□□ -2.26
HMGN3P1-201ENST00000453847 TTC9CQ8N5M4 171 aa0.91□□□□□ -2.26
HMGN3P1-201ENST00000453847 C10orf95Q9H7T3 257 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms