RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 TPPP3Q9BW30 176 aa12.33□□□□□ -0.44
PDLIM2-214ENST00000452226 RPP21Q9H633 154 aaKnown RBP12.33□□□□□ -0.44
PDLIM2-214ENST00000452226 CTRLP40313 264 aa12.32□□□□□ -0.44
PDLIM2-214ENST00000452226 SMIM7Q9BQ49 75 aa12.32□□□□□ -0.44
PDLIM2-214ENST00000452226 CNFNQ9BYD5 112 aa12.32□□□□□ -0.44
PDLIM2-214ENST00000452226 Q9HAA7 133 aa12.32□□□□□ -0.44
PDLIM2-214ENST00000452226 TRBV7-3A0A075B6L6 115 aa12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 A0A087WWC5 75 aa12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 LRCOL1A6NCL2 159 aa12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 IGHV3-30P01768 117 aa12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 IGHV3-33P01772 117 aa12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 IGHV3-30-3P0DP02 117 aa12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 IGHV3-30-5P0DP03 117 aa12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 CEBPGP53567 150 aa12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 UBE2D3P61077 147 aa12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 UBE2D2P62837 147 aa12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 RPL36AP83881 106 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 ZNF56Q15929 161 aa12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 RPL36ALQ969Q0 106 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-214ENST00000452226 SMIM17P0DL12 118 aa12.3□□□□□ -0.44
PDLIM2-214ENST00000452226 Q5VSD8 79 aa12.3□□□□□ -0.44
PDLIM2-214ENST00000452226 LINC01551Q86U37 167 aa12.3□□□□□ -0.44
PDLIM2-214ENST00000452226 NEXN-AS1Q8NBZ9 246 aa12.3□□□□□ -0.44
PDLIM2-214ENST00000452226 IGLV5-52A0A0A0MRZ9 124 aa12.29□□□□□ -0.44
PDLIM2-214ENST00000452226 ZNF727A8MUV8 499 aa12.29□□□□□ -0.44
PDLIM2-214ENST00000452226 NTF3P20783 257 aa12.29□□□□□ -0.44
PDLIM2-214ENST00000452226 SRRM2Q9UQ35 2752 aaKnown RBP12.29□□□□□ -0.44
PDLIM2-214ENST00000452226 C9JQL5 133 aa12.28□□□□□ -0.44
PDLIM2-214ENST00000452226 F5H697 171 aa12.28□□□□□ -0.44
PDLIM2-214ENST00000452226 GATCO43716 136 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-214ENST00000452226 NTN5Q8WTR8 489 aaPredicted RBP12.28□□□□□ -0.44
PDLIM2-214ENST00000452226 GTSF1Q8WW33 167 aa12.28□□□□□ -0.44
PDLIM2-214ENST00000452226 VPS13BQ7Z7G8 4022 aa12.27□□□□□ -0.44
PDLIM2-214ENST00000452226 FAM229AH3BQW9 127 aa12.27□□□□□ -0.45
PDLIM2-214ENST00000452226 SMR3BP02814 79 aaPredicted RBP12.27□□□□□ -0.45
PDLIM2-214ENST00000452226 TRGC1P0CF51 173 aa12.27□□□□□ -0.45
PDLIM2-214ENST00000452226 CT83Q5H943 113 aa12.27□□□□□ -0.45
PDLIM2-214ENST00000452226 SMDT1Q9H4I9 107 aa12.27□□□□□ -0.45
PDLIM2-214ENST00000452226 FLG2Q5D862 2391 aaPredicted RBP12.26□□□□□ -0.45
PDLIM2-214ENST00000452226 A8MWL6 223 aa12.26□□□□□ -0.45
PDLIM2-214ENST00000452226 M0QY20 66 aa12.26□□□□□ -0.45
PDLIM2-214ENST00000452226 FOXA3P55318 350 aaPredicted RBP12.26□□□□□ -0.45
PDLIM2-214ENST00000452226 SRSF3P84103 164 aaKnown RBP12.26□□□□□ -0.45
PDLIM2-214ENST00000452226 FAM74A3Q4VXF1 159 aa12.26□□□□□ -0.45
PDLIM2-214ENST00000452226 Q8N814 137 aa12.26□□□□□ -0.45
PDLIM2-214ENST00000452226 HAMPP81172 84 aa12.25□□□□□ -0.45
PDLIM2-214ENST00000452226 LAGE3Q14657 143 aa12.25□□□□□ -0.45
PDLIM2-214ENST00000452226 PEA15Q15121 130 aa12.25□□□□□ -0.45
PDLIM2-214ENST00000452226 Q8N3U1 123 aa12.25□□□□□ -0.45
PDLIM2-214ENST00000452226 DPH3P1Q9H4G8 78 aa12.25□□□□□ -0.45
PDLIM2-214ENST00000452226 OSTCQ9NRP0 149 aa12.25□□□□□ -0.45
PDLIM2-214ENST00000452226 TMEM241Q24JQ0 296 aa12.24□□□□□ -0.45
PDLIM2-214ENST00000452226 SUMO4Q6EEV6 95 aa12.24□□□□□ -0.45
PDLIM2-214ENST00000452226 NIT1Q86X76 327 aa12.24□□□□□ -0.45
PDLIM2-214ENST00000452226 TMEM70Q9BUB7 260 aa12.24□□□□□ -0.45
PDLIM2-214ENST00000452226 TM2D2Q9BX73 214 aa12.24□□□□□ -0.45
PDLIM2-214ENST00000452226 MGPP08493 103 aa12.23□□□□□ -0.45
PDLIM2-214ENST00000452226 TWIST1Q15672 202 aa12.23□□□□□ -0.45
PDLIM2-214ENST00000452226 DNAJC30Q96LL9 226 aa12.23□□□□□ -0.45
PDLIM2-214ENST00000452226 TRBV6-8A0A0A6YYG3 113 aa12.22□□□□□ -0.45
PDLIM2-214ENST00000452226 H7C1H1 209 aa12.22□□□□□ -0.45
PDLIM2-214ENST00000452226 DAZ4Q86SG3 579 aaKnown RBP12.22□□□□□ -0.45
PDLIM2-214ENST00000452226 TSKUQ8WUA8 353 aa12.22□□□□□ -0.45
PDLIM2-214ENST00000452226 DAZ3Q9NR90 486 aaKnown RBP12.22□□□□□ -0.45
PDLIM2-214ENST00000452226 FAM231BA6NCW3 169 aa12.21□□□□□ -0.45
PDLIM2-214ENST00000452226 RPL23P62829 140 aaKnown RBP12.21□□□□□ -0.45
PDLIM2-214ENST00000452226 ISOC2Q96AB3 205 aa12.21□□□□□ -0.45
PDLIM2-214ENST00000452226 CHCHD7Q9BUK0 85 aa12.21□□□□□ -0.45
PDLIM2-214ENST00000452226 GFRA4Q9GZZ7 299 aa12.21□□□□□ -0.45
PDLIM2-214ENST00000452226 TRAV8-3A0A0A6YYJ7 113 aa12.2□□□□□ -0.46
PDLIM2-214ENST00000452226 RASL11AQ6T310 242 aa12.2□□□□□ -0.46
PDLIM2-214ENST00000452226 NTM-AS1Q6ZSK4 140 aa12.2□□□□□ -0.46
PDLIM2-214ENST00000452226 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
PDLIM2-214ENST00000452226 NAT8Q9UHE5 227 aa12.2□□□□□ -0.46
PDLIM2-214ENST00000452226 V9GYV3 84 aa12.2□□□□□ -0.46
PDLIM2-214ENST00000452226 DNAH8Q96JB1 4490 aa12.19□□□□□ -0.46
PDLIM2-214ENST00000452226 WFDC2Q14508 124 aa12.19□□□□□ -0.46
PDLIM2-214ENST00000452226 TMEM97Q5BJF2 176 aa12.19□□□□□ -0.46
PDLIM2-214ENST00000452226 C15orf54Q8N8G6 183 aa12.19□□□□□ -0.46
PDLIM2-214ENST00000452226 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.19□□□□□ -0.46
PDLIM2-214ENST00000452226 MYCBP2O75592 4640 aa12.18□□□□□ -0.46
PDLIM2-214ENST00000452226 HIGD1CA8MV81 97 aa12.18□□□□□ -0.46
PDLIM2-214ENST00000452226 NIT2Q9NQR4 276 aa12.18□□□□□ -0.46
PDLIM2-214ENST00000452226 FAM30AQ9NZY2 134 aa12.18□□□□□ -0.46
PDLIM2-214ENST00000452226 GATD1Q8NB37 220 aa12.17□□□□□ -0.46
PDLIM2-214ENST00000452226 URGCP-MRPS24S4R325 110 aa12.17□□□□□ -0.46
PDLIM2-214ENST00000452226 A0A1B0GUT8 65 aa12.16□□□□□ -0.46
PDLIM2-214ENST00000452226 LECT2O14960 151 aa12.16□□□□□ -0.46
PDLIM2-214ENST00000452226 ADIRFQ15847 76 aa12.16□□□□□ -0.46
PDLIM2-214ENST00000452226 SMIM15Q7Z3B0 74 aa12.16□□□□□ -0.46
PDLIM2-214ENST00000452226 A0A087WX48 190 aa12.15□□□□□ -0.46
PDLIM2-214ENST00000452226 J3QL48 77 aa12.15□□□□□ -0.46
PDLIM2-214ENST00000452226 RAB14P61106 215 aa12.15□□□□□ -0.46
PDLIM2-214ENST00000452226 IQCJQ1A5X6 159 aa12.15□□□□□ -0.46
PDLIM2-214ENST00000452226 TRAV26-2A0A0B4J265 109 aa12.14□□□□□ -0.47
PDLIM2-214ENST00000452226 ELOBQ15370 118 aa12.14□□□□□ -0.47
PDLIM2-214ENST00000452226 NUP35Q8NFH5 326 aa12.14□□□□□ -0.47
PDLIM2-214ENST00000452226 BORCS7Q96B45 105 aa12.14□□□□□ -0.47
PDLIM2-214ENST00000452226 KLK12Q9UKR0 248 aa12.14□□□□□ -0.47
PDLIM2-214ENST00000452226 COX11Q9Y6N1 276 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms