RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 NFE4Q86UQ8 179 aa13.23□□□□□ -0.29
NELFE-206ENST00000444811 MGPP08493 103 aa13.22□□□□□ -0.29
NELFE-206ENST00000444811 DNAH5Q8TE73 4624 aa13.22□□□□□ -0.29
NELFE-206ENST00000444811 M0QY20 66 aa13.21□□□□□ -0.29
NELFE-206ENST00000444811 TRGC1P0CF51 173 aa13.21□□□□□ -0.29
NELFE-206ENST00000444811 ERVFC1-1P60608 527 aa13.21□□□□□ -0.29
NELFE-206ENST00000444811 CT83Q5H943 113 aa13.21□□□□□ -0.29
NELFE-206ENST00000444811 LRP1BQ9NZR2 4599 aa13.21□□□□□ -0.29
NELFE-206ENST00000444811 SUMO4Q6EEV6 95 aa13.2□□□□□ -0.3
NELFE-206ENST00000444811 DPH3P1Q9H4G8 78 aa13.2□□□□□ -0.3
NELFE-206ENST00000444811 A8MWL6 223 aa13.19□□□□□ -0.3
NELFE-206ENST00000444811 KRTAP10-2P60368 255 aa13.19□□□□□ -0.3
NELFE-206ENST00000444811 SPATA12Q7Z6I5 190 aa13.19□□□□□ -0.3
NELFE-206ENST00000444811 NIT1Q86X76 327 aa13.19□□□□□ -0.3
NELFE-206ENST00000444811 FOXA3P55318 350 aaPredicted RBP13.18□□□□□ -0.3
NELFE-206ENST00000444811 PEA15Q15121 130 aa13.18□□□□□ -0.3
NELFE-206ENST00000444811 TWIST1Q15672 202 aa13.18□□□□□ -0.3
NELFE-206ENST00000444811 DAZ4Q86SG3 579 aaKnown RBP13.18□□□□□ -0.3
NELFE-206ENST00000444811 DAZ3Q9NR90 486 aaKnown RBP13.18□□□□□ -0.3
NELFE-206ENST00000444811 OSTCQ9NRP0 149 aa13.18□□□□□ -0.3
NELFE-206ENST00000444811 TRBV6-8A0A0A6YYG3 113 aa13.17□□□□□ -0.3
NELFE-206ENST00000444811 RPL23P62829 140 aaKnown RBP13.17□□□□□ -0.3
NELFE-206ENST00000444811 LAGE3Q14657 143 aa13.17□□□□□ -0.3
NELFE-206ENST00000444811 FAM74A3Q4VXF1 159 aa13.17□□□□□ -0.3
NELFE-206ENST00000444811 ISOC2Q96AB3 205 aa13.17□□□□□ -0.3
NELFE-206ENST00000444811 PGLYRP4Q96LB8 373 aa13.17□□□□□ -0.3
NELFE-206ENST00000444811 SMDT1Q9H4I9 107 aa13.17□□□□□ -0.3
NELFE-206ENST00000444811 TMEM241Q24JQ0 296 aa13.16□□□□□ -0.3
NELFE-206ENST00000444811 NTM-AS1Q6ZSK4 140 aa13.16□□□□□ -0.3
NELFE-206ENST00000444811 Q9HAA7 133 aa13.16□□□□□ -0.3
NELFE-206ENST00000444811 V9GYV3 84 aa13.16□□□□□ -0.3
NELFE-206ENST00000444811 A0A087WTM6 91 aa13.15□□□□□ -0.3
NELFE-206ENST00000444811 C16orf90A8MZG2 172 aa13.15□□□□□ -0.3
NELFE-206ENST00000444811 H7C1H1 209 aa13.15□□□□□ -0.3
NELFE-206ENST00000444811 TSKUQ8WUA8 353 aa13.15□□□□□ -0.3
NELFE-206ENST00000444811 DNAJC30Q96LL9 226 aa13.15□□□□□ -0.3
NELFE-206ENST00000444811 RASL11AQ6T310 242 aa13.14□□□□□ -0.31
NELFE-206ENST00000444811 GFRA4Q9GZZ7 299 aa13.14□□□□□ -0.31
NELFE-206ENST00000444811 NAT8Q9UHE5 227 aa13.14□□□□□ -0.31
NELFE-206ENST00000444811 KRTAP4-5Q9BYR2 181 aa13.13□□□□□ -0.31
NELFE-206ENST00000444811 FAM231BA6NCW3 169 aa13.12□□□□□ -0.31
NELFE-206ENST00000444811 HIGD1CA8MV81 97 aa13.12□□□□□ -0.31
NELFE-206ENST00000444811 ADIRFQ15847 76 aa13.12□□□□□ -0.31
NELFE-206ENST00000444811 GATD1Q8NB37 220 aa13.12□□□□□ -0.31
NELFE-206ENST00000444811 CHCHD7Q9BUK0 85 aa13.12□□□□□ -0.31
NELFE-206ENST00000444811 NIT2Q9NQR4 276 aa13.12□□□□□ -0.31
NELFE-206ENST00000444811 LRCOL1A6NCL2 159 aa13.11□□□□□ -0.31
NELFE-206ENST00000444811 FUSP35637 526 aaKnown RBP eCLIP13.11□□□□□ -0.31
NELFE-206ENST00000444811 TMEM97Q5BJF2 176 aa13.11□□□□□ -0.31
NELFE-206ENST00000444811 C15orf54Q8N8G6 183 aa13.11□□□□□ -0.31
NELFE-206ENST00000444811 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.11□□□□□ -0.31
NELFE-206ENST00000444811 URGCP-MRPS24S4R325 110 aa13.11□□□□□ -0.31
NELFE-206ENST00000444811 APOBP04114 4563 aaKnown RBP13.1□□□□□ -0.31
NELFE-206ENST00000444811 TRAV26-2A0A0B4J265 109 aa13.1□□□□□ -0.31
NELFE-206ENST00000444811 KLK12Q9UKR0 248 aa13.1□□□□□ -0.31
NELFE-206ENST00000444811 A0A087WX48 190 aa13.09□□□□□ -0.31
NELFE-206ENST00000444811 TRAV8-3A0A0A6YYJ7 113 aa13.09□□□□□ -0.31
NELFE-206ENST00000444811 A0A1B0GUT8 65 aa13.09□□□□□ -0.31
NELFE-206ENST00000444811 EREGO14944 169 aa13.09□□□□□ -0.31
NELFE-206ENST00000444811 PSCAO43653 123 aa13.09□□□□□ -0.31
NELFE-206ENST00000444811 MPV17L2Q567V2 206 aa13.09□□□□□ -0.31
NELFE-206ENST00000444811 SMIM15Q7Z3B0 74 aa13.09□□□□□ -0.31
NELFE-206ENST00000444811 IFITM2Q01629 132 aa13.08□□□□□ -0.32
NELFE-206ENST00000444811 IQCJQ1A5X6 159 aa13.08□□□□□ -0.32
NELFE-206ENST00000444811 NUP35Q8NFH5 326 aa13.08□□□□□ -0.32
NELFE-206ENST00000444811 BORCS7Q96B45 105 aa13.08□□□□□ -0.32
NELFE-206ENST00000444811 CHCHD5Q9BSY4 110 aa13.08□□□□□ -0.32
NELFE-206ENST00000444811 TRBV25-1A0A075B6N4 114 aa13.07□□□□□ -0.32
NELFE-206ENST00000444811 TMEM262E9PQX1 116 aa13.07□□□□□ -0.32
NELFE-206ENST00000444811 FRZBQ92765 325 aa13.07□□□□□ -0.32
NELFE-206ENST00000444811 RPL39LQ96EH5 51 aaKnown RBP13.07□□□□□ -0.32
NELFE-206ENST00000444811 IGHV1-24A0A0C4DH33 117 aa13.06□□□□□ -0.32
NELFE-206ENST00000444811 RAB14P61106 215 aa13.06□□□□□ -0.32
NELFE-206ENST00000444811 ELOBQ15370 118 aa13.06□□□□□ -0.32
NELFE-206ENST00000444811 KCNIP4Q6PIL6 250 aa13.06□□□□□ -0.32
NELFE-206ENST00000444811 ATRAIDQ6UW56 229 aa13.06□□□□□ -0.32
NELFE-206ENST00000444811 MAPKAPK5-AS1Q8N8E1 139 aa13.06□□□□□ -0.32
NELFE-206ENST00000444811 RNF185Q96GF1 192 aa13.06□□□□□ -0.32
NELFE-206ENST00000444811 TM2D2Q9BX73 214 aa13.06□□□□□ -0.32
NELFE-206ENST00000444811 TMEM191AQ9H0A3 160 aa13.06□□□□□ -0.32
NELFE-206ENST00000444811 PGPEP1Q9NXJ5 209 aa13.06□□□□□ -0.32
NELFE-206ENST00000444811 GAGE6Q13070 117 aa13.05□□□□□ -0.32
NELFE-206ENST00000444811 WFDC2Q14508 124 aa13.05□□□□□ -0.32
NELFE-206ENST00000444811 CLLU1Q5K131 121 aa13.05□□□□□ -0.32
NELFE-206ENST00000444811 Q8N976 141 aa13.05□□□□□ -0.32
NELFE-206ENST00000444811 DEFB104AQ8WTQ1 72 aa13.05□□□□□ -0.32
NELFE-206ENST00000444811 UBE2WQ96B02 151 aa13.05□□□□□ -0.32
NELFE-206ENST00000444811 SMIM27A0A1W2PRY6 76 aa13.04□□□□□ -0.32
NELFE-206ENST00000444811 GAS8-AS1O95177 125 aa13.04□□□□□ -0.32
NELFE-206ENST00000444811 PKIAP61925 76 aa13.04□□□□□ -0.32
NELFE-206ENST00000444811 CDPF1Q6NVV7 123 aa13.04□□□□□ -0.32
NELFE-206ENST00000444811 ENHOQ6UWT2 76 aa13.04□□□□□ -0.32
NELFE-206ENST00000444811 NAT8BQ9UHF3 227 aa13.04□□□□□ -0.32
NELFE-206ENST00000444811 RBX1P62877 108 aa13.03□□□□□ -0.32
NELFE-206ENST00000444811 RIGQ13278 110 aa13.03□□□□□ -0.32
NELFE-206ENST00000444811 AMN1Q8IY45 258 aa13.02□□□□□ -0.33
NELFE-206ENST00000444811 Q8N814 137 aa13.02□□□□□ -0.33
NELFE-206ENST00000444811 IGKV2D-24A0A075B6R9 120 aa13.01□□□□□ -0.33
NELFE-206ENST00000444811 ANGP03950 147 aaKnown RBP13.01□□□□□ -0.33
NELFE-206ENST00000444811 RAB4AP20338 218 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms