RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 DEFB131AP59861 70 aa8.78□□□□□ -1
HCFC1-203ENST00000444191 TCTEX1D4Q5JR98 221 aa8.78□□□□□ -1
HCFC1-203ENST00000444191 TRAV8-3A0A0A6YYJ7 113 aa8.78□□□□□ -1
HCFC1-203ENST00000444191 IGHV4-59P01825 116 aa8.78□□□□□ -1
HCFC1-203ENST00000444191 CFAP161Q6P656 301 aa8.78□□□□□ -1
HCFC1-203ENST00000444191 TEX29Q8N6K0 151 aa8.78□□□□□ -1
HCFC1-203ENST00000444191 NTN5Q8WTR8 489 aaPredicted RBP8.78□□□□□ -1
HCFC1-203ENST00000444191 TMEM190Q8WZ59 177 aa8.78□□□□□ -1
HCFC1-203ENST00000444191 UBE2E2Q96LR5 201 aa8.78□□□□□ -1
HCFC1-203ENST00000444191 IGLV2-18A0A075B6J9 118 aa8.77□□□□□ -1.01
HCFC1-203ENST00000444191 TCL1BO95988 128 aa8.77□□□□□ -1.01
HCFC1-203ENST00000444191 MEIG1Q5JSS6 88 aa8.77□□□□□ -1.01
HCFC1-203ENST00000444191 ITPR1Q14643 2758 aa8.77□□□□□ -1.01
HCFC1-203ENST00000444191 COX6CP09669 75 aa8.77□□□□□ -1.01
HCFC1-203ENST00000444191 RNASE3P12724 160 aaKnown RBP8.77□□□□□ -1.01
HCFC1-203ENST00000444191 CNFNQ9BYD5 112 aa8.77□□□□□ -1.01
HCFC1-203ENST00000444191 SLC25A20O43772 301 aa8.76□□□□□ -1.01
HCFC1-203ENST00000444191 A8MZ25 164 aa8.76□□□□□ -1.01
HCFC1-203ENST00000444191 MUSTN1Q8IVN3 82 aa8.76□□□□□ -1.01
HCFC1-203ENST00000444191 USMG5Q96IX5 58 aa8.76□□□□□ -1.01
HCFC1-203ENST00000444191 TIMM21Q9BVV7 248 aa8.76□□□□□ -1.01
HCFC1-203ENST00000444191 TOMM7Q9P0U1 55 aa8.76□□□□□ -1.01
HCFC1-203ENST00000444191 RPL13AP40429 203 aaKnown RBP8.76□□□□□ -1.01
HCFC1-203ENST00000444191 XGP55808 180 aa8.76□□□□□ -1.01
HCFC1-203ENST00000444191 PROK1P58294 105 aa8.76□□□□□ -1.01
HCFC1-203ENST00000444191 SMIM20Q8N5G0 67 aa8.76□□□□□ -1.01
HCFC1-203ENST00000444191 ZMAT4Q9H898 229 aa8.76□□□□□ -1.01
HCFC1-203ENST00000444191 FLNCQ14315 2725 aa8.76□□□□□ -1.01
HCFC1-203ENST00000444191 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.75□□□□□ -1.01
HCFC1-203ENST00000444191 IGHV4-30-2A0A087WSY4 118 aa8.75□□□□□ -1.01
HCFC1-203ENST00000444191 IGKV2-29A2NJV5 120 aaPredicted RBP8.75□□□□□ -1.01
HCFC1-203ENST00000444191 C1QTNF4Q9BXJ3 329 aa8.75□□□□□ -1.01
HCFC1-203ENST00000444191 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
HCFC1-203ENST00000444191 EBI3Q14213 229 aa8.75□□□□□ -1.01
HCFC1-203ENST00000444191 ANKRD29Q8N6D5 301 aa8.75□□□□□ -1.01
HCFC1-203ENST00000444191 PPDPFLQ8WWR9 84 aa8.75□□□□□ -1.01
HCFC1-203ENST00000444191 ZNF580Q9UK33 172 aa8.75□□□□□ -1.01
HCFC1-203ENST00000444191 TRAV13-1A0A0B4J241 112 aa8.75□□□□□ -1.01
HCFC1-203ENST00000444191 TRAV12-1A0A0B4J245 112 aa8.75□□□□□ -1.01
HCFC1-203ENST00000444191 HERV-K104P63124 156 aa8.75□□□□□ -1.01
HCFC1-203ENST00000444191 NDUFA11Q86Y39 141 aa8.75□□□□□ -1.01
HCFC1-203ENST00000444191 IGHV1OR15-1A0A075B7D0 117 aa8.74□□□□□ -1.01
HCFC1-203ENST00000444191 C11orf71Q6IPW1 123 aa8.74□□□□□ -1.01
HCFC1-203ENST00000444191 CRYBG3Q68DQ2 2970 aa8.74□□□□□ -1.01
HCFC1-203ENST00000444191 MORN3Q6PF18 240 aaPredicted RBP8.74□□□□□ -1.01
HCFC1-203ENST00000444191 SHISA2Q6UWI4 295 aa8.74□□□□□ -1.01
HCFC1-203ENST00000444191 Q6ZUT4 128 aa8.74□□□□□ -1.01
HCFC1-203ENST00000444191 GAGE2BQ13066 116 aa8.74□□□□□ -1.01
HCFC1-203ENST00000444191 GAGE2EQ4V326 116 aa8.74□□□□□ -1.01
HCFC1-203ENST00000444191 C2orf82Q6UX34 121 aa8.74□□□□□ -1.01
HCFC1-203ENST00000444191 MRPL53Q96EL3 112 aaKnown RBP8.74□□□□□ -1.01
HCFC1-203ENST00000444191 GAGE2DQ9UEU5 116 aa8.74□□□□□ -1.01
HCFC1-203ENST00000444191 HRNRQ86YZ3 2850 aaPredicted RBP8.74□□□□□ -1.01
HCFC1-203ENST00000444191 A0A0J9YY99 117 aa8.73□□□□□ -1.01
HCFC1-203ENST00000444191 ZFAND6Q6FIF0 208 aa8.73□□□□□ -1.01
HCFC1-203ENST00000444191 XCL2Q9UBD3 114 aa8.73□□□□□ -1.01
HCFC1-203ENST00000444191 C10orf126Q8N4M7 172 aa8.73□□□□□ -1.01
HCFC1-203ENST00000444191 M0R2P5 195 aa8.73□□□□□ -1.01
HCFC1-203ENST00000444191 MSMBP08118 114 aa8.73□□□□□ -1.01
HCFC1-203ENST00000444191 TSPEAR-AS2P59090 65 aa8.73□□□□□ -1.01
HCFC1-203ENST00000444191 SRSF2Q01130 221 aaKnown RBP8.73□□□□□ -1.01
HCFC1-203ENST00000444191 ZANQ9Y493 2812 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 MUC4Q99102 2169 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 BSNQ9UPA5 3926 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 CFC1BP0CG36 223 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 CFC1P0CG37 223 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 C3orf56Q8N813 242 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 ZNRF2Q8NHG8 242 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 NDUFA12Q9UI09 145 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 LENEPQ9Y5L5 61 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 GAGE5Q13069 117 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 GAGE6Q13070 117 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 I3L3M4 83 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 DEFB112Q30KQ8 113 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 FBXL19-AS1Q494R0 122 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 NFE4Q86UQ8 179 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 APRG1Q8IVJ8 170 aa8.72□□□□□ -1.01
HCFC1-203ENST00000444191 CFHR3Q02985 330 aa8.71□□□□□ -1.01
HCFC1-203ENST00000444191 TEN1Q86WV5 123 aa8.71□□□□□ -1.01
HCFC1-203ENST00000444191 TMEM141Q96I45 108 aa8.71□□□□□ -1.01
HCFC1-203ENST00000444191 CDIP1Q9H305 208 aa8.71□□□□□ -1.01
HCFC1-203ENST00000444191 TRAV8-4A0A0B4J246 113 aa8.71□□□□□ -1.02
HCFC1-203ENST00000444191 CRIP2P52943 208 aaPredicted RBP8.71□□□□□ -1.02
HCFC1-203ENST00000444191 Q6ZSV7 163 aa8.7□□□□□ -1.02
HCFC1-203ENST00000444191 ZNF575Q86XF7 245 aa8.7□□□□□ -1.02
HCFC1-203ENST00000444191 DOPEY1Q5JWR5 2465 aa8.7□□□□□ -1.02
HCFC1-203ENST00000444191 NBL1P41271 181 aa8.7□□□□□ -1.02
HCFC1-203ENST00000444191 GPHB5Q86YW7 130 aa8.7□□□□□ -1.02
HCFC1-203ENST00000444191 CLEC2BQ92478 149 aa8.7□□□□□ -1.02
HCFC1-203ENST00000444191 C11orf68Q9H3H3 251 aaKnown RBP8.7□□□□□ -1.02
HCFC1-203ENST00000444191 TRGV1A0A0A0MS02 117 aa8.69□□□□□ -1.02
HCFC1-203ENST00000444191 COX8CQ7Z4L0 72 aa8.69□□□□□ -1.02
HCFC1-203ENST00000444191 SLURP1P55000 103 aa8.69□□□□□ -1.02
HCFC1-203ENST00000444191 FHL3Q13643 280 aa8.69□□□□□ -1.02
HCFC1-203ENST00000444191 CIRBPQ14011 172 aaKnown RBP8.69□□□□□ -1.02
HCFC1-203ENST00000444191 TEX49A0A1B0GTD5 131 aa8.68□□□□□ -1.02
HCFC1-203ENST00000444191 RS1O15537 224 aa8.68□□□□□ -1.02
HCFC1-203ENST00000444191 ATXN8Q156A1 80 aa8.68□□□□□ -1.02
HCFC1-203ENST00000444191 CFAP126Q5VTH2 177 aa8.68□□□□□ -1.02
HCFC1-203ENST00000444191 TRGV11A0A075B6L2 103 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms