RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 RAB4BP61018 213 aa7.68□□□□□ -1.18
HDAC4-202ENST00000430200 RAB19A4D1S5 217 aa7.67□□□□□ -1.18
HDAC4-202ENST00000430200 C19orf71A6NCJ1 209 aa7.67□□□□□ -1.18
HDAC4-202ENST00000430200 KRTAP26-1Q6PEX3 210 aa7.67□□□□□ -1.18
HDAC4-202ENST00000430200 CLPSL2Q6UWE3 100 aa7.67□□□□□ -1.18
HDAC4-202ENST00000430200 C15orf54Q8N8G6 183 aa7.67□□□□□ -1.18
HDAC4-202ENST00000430200 URGCP-MRPS24S4R325 110 aa7.67□□□□□ -1.18
HDAC4-202ENST00000430200 A0A087WX48 190 aa7.66□□□□□ -1.18
HDAC4-202ENST00000430200 FAM229AH3BQW9 127 aa7.66□□□□□ -1.18
HDAC4-202ENST00000430200 S100A9P06702 114 aaKnown RBP7.66□□□□□ -1.18
HDAC4-202ENST00000430200 TOR2AQ5JU69 321 aa7.66□□□□□ -1.18
HDAC4-202ENST00000430200 SPANXN1Q5VSR9 72 aa7.66□□□□□ -1.18
HDAC4-202ENST00000430200 CHCHD7Q9BUK0 85 aa7.66□□□□□ -1.18
HDAC4-202ENST00000430200 VAX2Q9UIW0 290 aa7.66□□□□□ -1.18
HDAC4-202ENST00000430200 TRAV1-1A0A0B4J248 108 aa7.65□□□□□ -1.18
HDAC4-202ENST00000430200 SUMO4Q6EEV6 95 aa7.65□□□□□ -1.18
HDAC4-202ENST00000430200 DEFB104AQ8WTQ1 72 aa7.65□□□□□ -1.18
HDAC4-202ENST00000430200 AP1S3Q96PC3 154 aa7.65□□□□□ -1.18
HDAC4-202ENST00000430200 MANBALQ9NQG1 85 aa7.65□□□□□ -1.18
HDAC4-202ENST00000430200 PANO1I0J062 215 aa7.64□□□□□ -1.19
HDAC4-202ENST00000430200 M0QY20 66 aa7.64□□□□□ -1.19
HDAC4-202ENST00000430200 CIRBP-AS1Q8TBR5 109 aa7.64□□□□□ -1.19
HDAC4-202ENST00000430200 TPPP3Q9BW30 176 aa7.64□□□□□ -1.19
HDAC4-202ENST00000430200 GFRA4Q9GZZ7 299 aa7.64□□□□□ -1.19
HDAC4-202ENST00000430200 USP17L23D6RBM5 183 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 F5H697 171 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 HLA-DQA1P01909 254 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 ANGP03950 147 aaKnown RBP7.63□□□□□ -1.19
HDAC4-202ENST00000430200 MGPP08493 103 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 SULT1A2P50226 295 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 RBX1P62877 108 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 MEF2BQ02080 365 aaPredicted RBP7.63□□□□□ -1.19
HDAC4-202ENST00000430200 GAGE6Q13070 117 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 FER1L6-AS1Q8NA97 138 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 OR2D3Q8NGH3 330 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 RMI2Q96E14 147 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 CHCHD5Q9BSY4 110 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 PRR34Q9NV39 138 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 COX11Q9Y6N1 276 aa7.63□□□□□ -1.19
HDAC4-202ENST00000430200 TMEM262E9PQX1 116 aa7.62□□□□□ -1.19
HDAC4-202ENST00000430200 K7EN84 100 aa7.62□□□□□ -1.19
HDAC4-202ENST00000430200 PRSS1P07477 247 aa7.62□□□□□ -1.19
HDAC4-202ENST00000430200 BCL2P10415 239 aa7.62□□□□□ -1.19
HDAC4-202ENST00000430200 CHAC1Q9BUX1 264 aa7.62□□□□□ -1.19
HDAC4-202ENST00000430200 C1orf43Q9BWL3 253 aa7.62□□□□□ -1.19
HDAC4-202ENST00000430200 CRPP02741 224 aa7.61□□□□□ -1.19
HDAC4-202ENST00000430200 CTRLP40313 264 aa7.61□□□□□ -1.19
HDAC4-202ENST00000430200 HNRNPA3P51991 378 aaKnown RBP7.61□□□□□ -1.19
HDAC4-202ENST00000430200 NKX2-5P52952 324 aaPredicted RBP7.61□□□□□ -1.19
HDAC4-202ENST00000430200 IQCJQ1A5X6 159 aa7.61□□□□□ -1.19
HDAC4-202ENST00000430200 TCTE3Q8IZS6 198 aa7.61□□□□□ -1.19
HDAC4-202ENST00000430200 LINC00269Q8N2A0 174 aa7.61□□□□□ -1.19
HDAC4-202ENST00000430200 C20orf203Q8NBC4 194 aa7.61□□□□□ -1.19
HDAC4-202ENST00000430200 IGLV4-60A0A075B6I1 120 aa7.6□□□□□ -1.19
HDAC4-202ENST00000430200 IGLV10-54A0A075B6I4 117 aa7.6□□□□□ -1.19
HDAC4-202ENST00000430200 GNG4P50150 75 aa7.6□□□□□ -1.19
HDAC4-202ENST00000430200 EIF5AP63241 154 aaKnown RBP7.6□□□□□ -1.19
HDAC4-202ENST00000430200 Q0VG73 95 aa7.6□□□□□ -1.19
HDAC4-202ENST00000430200 ELOBQ15370 118 aa7.6□□□□□ -1.19
HDAC4-202ENST00000430200 LYZL1Q6UWQ5 148 aa7.6□□□□□ -1.19
HDAC4-202ENST00000430200 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.6□□□□□ -1.19
HDAC4-202ENST00000430200 RAB5CP51148 216 aa7.59□□□□□ -1.19
HDAC4-202ENST00000430200 C9orf62Q8N4C0 152 aa7.59□□□□□ -1.19
HDAC4-202ENST00000430200 RNASE7Q9H1E1 156 aaKnown RBP7.59□□□□□ -1.19
HDAC4-202ENST00000430200 TRBV25-1A0A075B6N4 114 aa7.58□□□□□ -1.2
HDAC4-202ENST00000430200 TRAV26-2A0A0B4J265 109 aa7.58□□□□□ -1.2
HDAC4-202ENST00000430200 P01737 135 aa7.58□□□□□ -1.2
HDAC4-202ENST00000430200 PLA2G1BP04054 148 aaKnown RBP7.58□□□□□ -1.2
HDAC4-202ENST00000430200 SMIM17P0DL12 118 aa7.58□□□□□ -1.2
HDAC4-202ENST00000430200 FOXA3P55318 350 aaPredicted RBP7.58□□□□□ -1.2
HDAC4-202ENST00000430200 MIAQ16674 131 aa7.58□□□□□ -1.2
HDAC4-202ENST00000430200 KCNIP4Q6PIL6 250 aa7.58□□□□□ -1.2
HDAC4-202ENST00000430200 NUDT10Q8NFP7 164 aa7.58□□□□□ -1.2
HDAC4-202ENST00000430200 GTSF1Q8WW33 167 aa7.58□□□□□ -1.2
HDAC4-202ENST00000430200 SMIM12Q96EX1 92 aa7.58□□□□□ -1.2
HDAC4-202ENST00000430200 NUDT11Q96G61 164 aa7.58□□□□□ -1.2
HDAC4-202ENST00000430200 MED9Q9NWA0 146 aa7.58□□□□□ -1.2
HDAC4-202ENST00000430200 IGHV1-24A0A0C4DH33 117 aa7.57□□□□□ -1.2
HDAC4-202ENST00000430200 KRTAP29-1A8MX34 341 aaPredicted RBP7.57□□□□□ -1.2
HDAC4-202ENST00000430200 PDE6DO43924 150 aa7.57□□□□□ -1.2
HDAC4-202ENST00000430200 NTF3P20783 257 aa7.57□□□□□ -1.2
HDAC4-202ENST00000430200 RPS20P60866 119 aaKnown RBP7.57□□□□□ -1.2
HDAC4-202ENST00000430200 CACNG7P62955 275 aa7.57□□□□□ -1.2
HDAC4-202ENST00000430200 RASL11AQ6T310 242 aa7.57□□□□□ -1.2
HDAC4-202ENST00000430200 CNFNQ9BYD5 112 aa7.57□□□□□ -1.2
HDAC4-202ENST00000430200 SLPIP03973 132 aa7.56□□□□□ -1.2
HDAC4-202ENST00000430200 REG3AQ06141 175 aa7.56□□□□□ -1.2
HDAC4-202ENST00000430200 Q6ZNX1 250 aa7.56□□□□□ -1.2
HDAC4-202ENST00000430200 SLC51BQ86UW2 128 aa7.56□□□□□ -1.2
HDAC4-202ENST00000430200 GATD1Q8NB37 220 aa7.56□□□□□ -1.2
HDAC4-202ENST00000430200 RPL39LQ96EH5 51 aaKnown RBP7.56□□□□□ -1.2
HDAC4-202ENST00000430200 DPH3P1Q9H4G8 78 aa7.56□□□□□ -1.2
HDAC4-202ENST00000430200 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
HDAC4-202ENST00000430200 IFNA1P01562 189 aa7.55□□□□□ -1.2
HDAC4-202ENST00000430200 TMEM97Q5BJF2 176 aa7.55□□□□□ -1.2
HDAC4-202ENST00000430200 ALKAL2Q6UX46 152 aa7.55□□□□□ -1.2
HDAC4-202ENST00000430200 C9orf163Q8N9P6 203 aa7.55□□□□□ -1.2
HDAC4-202ENST00000430200 OCC1Q8TAD7 63 aa7.55□□□□□ -1.2
HDAC4-202ENST00000430200 DAZAP1Q96EP5 407 aaKnown RBP7.55□□□□□ -1.2
HDAC4-202ENST00000430200 PGLYRP4Q96LB8 373 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms