RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 CARD19Q96LW7 228 aa9.78□□□□□ -0.84
PTCH1-207ENST00000429896 PRAC2D3DTV9 90 aa9.78□□□□□ -0.84
PTCH1-207ENST00000429896 A0A0J9YX75 114 aa9.77□□□□□ -0.84
PTCH1-207ENST00000429896 IGLC2P0DOY2 106 aa9.77□□□□□ -0.84
PTCH1-207ENST00000429896 BOD1L2Q8IYS8 172 aa9.77□□□□□ -0.84
PTCH1-207ENST00000429896 C15orf53Q8NAA6 179 aa9.77□□□□□ -0.84
PTCH1-207ENST00000429896 UBE2V1Q13404 147 aa9.77□□□□□ -0.85
PTCH1-207ENST00000429896 K7EN84 100 aa9.77□□□□□ -0.85
PTCH1-207ENST00000429896 UBL5Q9BZL1 73 aa9.77□□□□□ -0.85
PTCH1-207ENST00000429896 GYPEP15421 78 aa9.77□□□□□ -0.85
PTCH1-207ENST00000429896 LINC01559Q495D7 138 aa9.77□□□□□ -0.85
PTCH1-207ENST00000429896 BRCA2P51587 3418 aa9.77□□□□□ -0.85
PTCH1-207ENST00000429896 TRACP01848 142 aa9.76□□□□□ -0.85
PTCH1-207ENST00000429896 ATP5G1P05496 136 aa9.76□□□□□ -0.85
PTCH1-207ENST00000429896 ZFAND3Q9H8U3 227 aa9.76□□□□□ -0.85
PTCH1-207ENST00000429896 CSPG4Q6UVK1 2322 aa9.76□□□□□ -0.85
PTCH1-207ENST00000429896 CRIP2P52943 208 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-207ENST00000429896 IL17DQ8TAD2 202 aa9.76□□□□□ -0.85
PTCH1-207ENST00000429896 C20orf144Q9BQM9 153 aa9.76□□□□□ -0.85
PTCH1-207ENST00000429896 C5orf42Q9H799 3197 aa9.76□□□□□ -0.85
PTCH1-207ENST00000429896 TIRAPP58753 221 aa9.75□□□□□ -0.85
PTCH1-207ENST00000429896 RPL39LQ96EH5 51 aaKnown RBP9.75□□□□□ -0.85
PTCH1-207ENST00000429896 RHOHQ15669 191 aa9.75□□□□□ -0.85
PTCH1-207ENST00000429896 CCDC168Q8NDH2 2452 aa9.75□□□□□ -0.85
PTCH1-207ENST00000429896 K7EQG2 157 aa9.75□□□□□ -0.85
PTCH1-207ENST00000429896 AMTNQ6UX39 209 aa9.75□□□□□ -0.85
PTCH1-207ENST00000429896 LAMA3Q16787 3333 aa9.75□□□□□ -0.85
PTCH1-207ENST00000429896 DEFB1P60022 68 aa9.74□□□□□ -0.85
PTCH1-207ENST00000429896 DAND5Q8N907 189 aa9.74□□□□□ -0.85
PTCH1-207ENST00000429896 SPATA25Q9BR10 227 aa9.74□□□□□ -0.85
PTCH1-207ENST00000429896 ZNF580Q9UK33 172 aa9.74□□□□□ -0.85
PTCH1-207ENST00000429896 CEND1Q8N111 149 aa9.74□□□□□ -0.85
PTCH1-207ENST00000429896 ZNF503Q96F45 646 aa9.74□□□□□ -0.85
PTCH1-207ENST00000429896 Q9H8V8 135 aa9.74□□□□□ -0.85
PTCH1-207ENST00000429896 H3BMG7 143 aa9.74□□□□□ -0.85
PTCH1-207ENST00000429896 COA6Q5JTJ3 125 aaKnown RBP9.74□□□□□ -0.85
PTCH1-207ENST00000429896 TRAV4A0A0B4J268 109 aa9.74□□□□□ -0.85
PTCH1-207ENST00000429896 KLK5Q9Y337 293 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-207ENST00000429896 Q6ZWC4 215 aa9.74□□□□□ -0.85
PTCH1-207ENST00000429896 NACAE9PAV3 2078 aa9.74□□□□□ -0.85
PTCH1-207ENST00000429896 C1orf43Q9BWL3 253 aa9.73□□□□□ -0.85
PTCH1-207ENST00000429896 ZNF747Q9BV97 191 aa9.73□□□□□ -0.85
PTCH1-207ENST00000429896 CRYBA4P53673 196 aa9.73□□□□□ -0.85
PTCH1-207ENST00000429896 HERVK_113P63121 156 aa9.72□□□□□ -0.85
PTCH1-207ENST00000429896 CAMK2N2Q96S95 79 aa9.72□□□□□ -0.85
PTCH1-207ENST00000429896 ETDCA0A1B0GVM5 59 aa9.72□□□□□ -0.85
PTCH1-207ENST00000429896 LRCOL1A6NCL2 159 aa9.72□□□□□ -0.85
PTCH1-207ENST00000429896 J3QQQ9 107 aa9.72□□□□□ -0.85
PTCH1-207ENST00000429896 LINC00482Q8N8I6 264 aa9.72□□□□□ -0.85
PTCH1-207ENST00000429896 HIVEP3Q5T1R4 2406 aa9.72□□□□□ -0.85
PTCH1-207ENST00000429896 INAFM2P0DMQ5 153 aa9.72□□□□□ -0.85
PTCH1-207ENST00000429896 ETDBQ3ZM63 59 aa9.72□□□□□ -0.85
PTCH1-207ENST00000429896 CHKB-CPT1BH3BT56 60 aa9.71□□□□□ -0.85
PTCH1-207ENST00000429896 Q6ZVH6 145 aa9.71□□□□□ -0.85
PTCH1-207ENST00000429896 COL27A1Q8IZC6 1860 aaPredicted RBP9.71□□□□□ -0.85
PTCH1-207ENST00000429896 CITED1Q99966 193 aa9.71□□□□□ -0.85
PTCH1-207ENST00000429896 ICOSQ9Y6W8 199 aa9.71□□□□□ -0.85
PTCH1-207ENST00000429896 COX7B2Q8TF08 81 aa9.71□□□□□ -0.86
PTCH1-207ENST00000429896 TRAV13-2A0A0B4J235 113 aa9.7□□□□□ -0.86
PTCH1-207ENST00000429896 IGLL5B9A064 214 aa9.7□□□□□ -0.86
PTCH1-207ENST00000429896 Q8N1Y9 231 aa9.7□□□□□ -0.86
PTCH1-207ENST00000429896 MYO18BQ8IUG5 2567 aa9.7□□□□□ -0.86
PTCH1-207ENST00000429896 C9orf118A6NHY6 69 aa9.7□□□□□ -0.86
PTCH1-207ENST00000429896 OXLD1Q5BKU9 147 aa9.7□□□□□ -0.86
PTCH1-207ENST00000429896 IGLC3P0DOY3 106 aa9.7□□□□□ -0.86
PTCH1-207ENST00000429896 PRO1854Q9UHT4 67 aa9.7□□□□□ -0.86
PTCH1-207ENST00000429896 UBE2AP49459 152 aa9.69□□□□□ -0.86
PTCH1-207ENST00000429896 BAALCQ8WXS3 180 aa9.69□□□□□ -0.86
PTCH1-207ENST00000429896 TMEM263Q8WUH6 116 aaKnown RBP9.69□□□□□ -0.86
PTCH1-207ENST00000429896 ODF3Q96PU9 254 aa9.69□□□□□ -0.86
PTCH1-207ENST00000429896 BRI3O95415 125 aa9.69□□□□□ -0.86
PTCH1-207ENST00000429896 MRPL23Q16540 153 aaKnown RBP9.69□□□□□ -0.86
PTCH1-207ENST00000429896 C11orf45Q8TAV5 145 aa9.69□□□□□ -0.86
PTCH1-207ENST00000429896 CCL18P55774 89 aa9.69□□□□□ -0.86
PTCH1-207ENST00000429896 EPG5Q9HCE0 2579 aa9.68□□□□□ -0.86
PTCH1-207ENST00000429896 BAALC-AS2P0C853 105 aa9.68□□□□□ -0.86
PTCH1-207ENST00000429896 BVES-AS1Q5T3Y7 98 aa9.68□□□□□ -0.86
PTCH1-207ENST00000429896 SH2D6Q7Z4S9 175 aa9.68□□□□□ -0.86
PTCH1-207ENST00000429896 Q8N2B8 174 aa9.68□□□□□ -0.86
PTCH1-207ENST00000429896 C20orf173Q96LM9 149 aa9.68□□□□□ -0.86
PTCH1-207ENST00000429896 CDPF1Q6NVV7 123 aa9.68□□□□□ -0.86
PTCH1-207ENST00000429896 NPSP0C0P6 89 aa9.68□□□□□ -0.86
PTCH1-207ENST00000429896 IFITM1P13164 125 aa9.68□□□□□ -0.86
PTCH1-207ENST00000429896 SMIM9A6NGZ8 99 aa9.67□□□□□ -0.86
PTCH1-207ENST00000429896 RBM3P98179 157 aaKnown RBP9.67□□□□□ -0.86
PTCH1-207ENST00000429896 K7EQD1 137 aa9.67□□□□□ -0.86
PTCH1-207ENST00000429896 C14orf132Q9NPU4 83 aa9.67□□□□□ -0.86
PTCH1-207ENST00000429896 IGKV3D-7A0A0C4DH55 119 aa9.67□□□□□ -0.86
PTCH1-207ENST00000429896 TRBV6-1A0A0K0K1D8 114 aa9.67□□□□□ -0.86
PTCH1-207ENST00000429896 PROK1P58294 105 aa9.67□□□□□ -0.86
PTCH1-207ENST00000429896 PCP2Q8IVA1 136 aa9.67□□□□□ -0.86
PTCH1-207ENST00000429896 NTN5Q8WTR8 489 aaPredicted RBP9.67□□□□□ -0.86
PTCH1-207ENST00000429896 TRBV20-1A0A075B6N2 111 aa9.66□□□□□ -0.86
PTCH1-207ENST00000429896 WFDC9Q8NEX5 89 aa9.66□□□□□ -0.86
PTCH1-207ENST00000429896 ATP6V0E2Q8NHE4 81 aa9.66□□□□□ -0.86
PTCH1-207ENST00000429896 SLC25A29Q8N8R3 303 aa9.66□□□□□ -0.86
PTCH1-207ENST00000429896 RNF183Q96D59 192 aa9.66□□□□□ -0.86
PTCH1-207ENST00000429896 F8VRH5 84 aa9.65□□□□□ -0.86
PTCH1-207ENST00000429896 ORMDL1Q9P0S3 153 aa9.65□□□□□ -0.86
PTCH1-207ENST00000429896 ZFYVE26Q68DK2 2539 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms