RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 NDUFS6O75380 124 aaKnown RBP6.87□□□□□ -1.31
CTNND1-208ENST00000428599 CRYGDP07320 174 aa6.87□□□□□ -1.31
CTNND1-208ENST00000428599 SHISA2Q6UWI4 295 aa6.87□□□□□ -1.31
CTNND1-208ENST00000428599 PCDH15Q96QU1 1955 aa6.87□□□□□ -1.31
CTNND1-208ENST00000428599 K7EN84 100 aa6.87□□□□□ -1.31
CTNND1-208ENST00000428599 FAM19A1Q7Z5A9 133 aa6.86□□□□□ -1.31
CTNND1-208ENST00000428599 UPK3BQ9BT76 320 aa6.86□□□□□ -1.31
CTNND1-208ENST00000428599 ZNF106Q9H2Y7 1883 aaKnown RBP6.86□□□□□ -1.31
CTNND1-208ENST00000428599 TRBV10-2A0A0K0K1G8 114 aa6.86□□□□□ -1.31
CTNND1-208ENST00000428599 DOCK11Q5JSL3 2073 aa6.86□□□□□ -1.31
CTNND1-208ENST00000428599 SHANK1Q9Y566 2161 aa6.86□□□□□ -1.31
CTNND1-208ENST00000428599 LOXL1Q08397 574 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-208ENST00000428599 FBXL19-AS1Q494R0 122 aa6.86□□□□□ -1.31
CTNND1-208ENST00000428599 UFSP1Q6NVU6 142 aa6.86□□□□□ -1.31
CTNND1-208ENST00000428599 A4D1N5 150 aa6.86□□□□□ -1.31
CTNND1-208ENST00000428599 DAND5Q8N907 189 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 IGKV1-17P01599 117 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 OTOGLQ3ZCN5 2332 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 TRAV26-1A0A087WT03 109 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 DEFB131BA0A096LNP1 70 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 WI2-2373I1.2A0A1W2PRP0 233 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 LYRM9A8MSI8 78 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 CEP192Q8TEP8 1941 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 NCKAP5O14513 1909 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 TRBV10-1A0A0K0K1A3 114 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 MIR7-3HGQ8N6C7 128 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 SMIM9A6NGZ8 99 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 PCP2Q8IVA1 136 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 MAP6D1Q9H9H5 199 aa6.85□□□□□ -1.31
CTNND1-208ENST00000428599 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
CTNND1-208ENST00000428599 TOMM6Q96B49 74 aa6.84□□□□□ -1.31
CTNND1-208ENST00000428599 SRCAPQ6ZRS2 3230 aa6.84□□□□□ -1.31
CTNND1-208ENST00000428599 MRPL55Q7Z7F7 128 aaKnown RBP6.84□□□□□ -1.31
CTNND1-208ENST00000428599 RITA1Q96K30 269 aa6.84□□□□□ -1.31
CTNND1-208ENST00000428599 ACACBO00763 2458 aa6.84□□□□□ -1.31
CTNND1-208ENST00000428599 FAM110AQ9BQ89 295 aa6.84□□□□□ -1.31
CTNND1-208ENST00000428599 LGALS9O00182 355 aa6.84□□□□□ -1.31
CTNND1-208ENST00000428599 NPSP0C0P6 89 aa6.84□□□□□ -1.31
CTNND1-208ENST00000428599 RPL39P62891 51 aaKnown RBP6.84□□□□□ -1.31
CTNND1-208ENST00000428599 CREBBPQ92793 2442 aa6.84□□□□□ -1.31
CTNND1-208ENST00000428599 REG3AQ06141 175 aa6.84□□□□□ -1.32
CTNND1-208ENST00000428599 Q6ZSR3 168 aa6.84□□□□□ -1.32
CTNND1-208ENST00000428599 UBE2D4Q9Y2X8 147 aa6.84□□□□□ -1.32
CTNND1-208ENST00000428599 A6NDX4 124 aa6.83□□□□□ -1.32
CTNND1-208ENST00000428599 NFE4Q86UQ8 179 aa6.83□□□□□ -1.32
CTNND1-208ENST00000428599 FREM1Q5H8C1 2179 aa6.83□□□□□ -1.32
CTNND1-208ENST00000428599 IGHV1-58A0A0C4DH39 117 aa6.83□□□□□ -1.32
CTNND1-208ENST00000428599 C11orf86A6NJI1 115 aa6.83□□□□□ -1.32
CTNND1-208ENST00000428599 TEX22C9J3V5 150 aa6.83□□□□□ -1.32
CTNND1-208ENST00000428599 WFDC11Q8NEX6 87 aa6.83□□□□□ -1.32
CTNND1-208ENST00000428599 BPY2O14599 106 aa6.83□□□□□ -1.32
CTNND1-208ENST00000428599 C19orf84I3L1E1 186 aa6.82□□□□□ -1.32
CTNND1-208ENST00000428599 MSMPQ1L6U9 139 aa6.82□□□□□ -1.32
CTNND1-208ENST00000428599 A0A096LNI7 61 aa6.82□□□□□ -1.32
CTNND1-208ENST00000428599 TRBV6-1A0A0K0K1D8 114 aa6.82□□□□□ -1.32
CTNND1-208ENST00000428599 B5MCH6 92 aa6.82□□□□□ -1.32
CTNND1-208ENST00000428599 A0A0J9YX75 114 aa6.82□□□□□ -1.32
CTNND1-208ENST00000428599 LINC00269Q8N2A0 174 aa6.82□□□□□ -1.32
CTNND1-208ENST00000428599 SIRPDQ9H106 197 aa6.82□□□□□ -1.32
CTNND1-208ENST00000428599 BRK1Q8WUW1 75 aa6.82□□□□□ -1.32
CTNND1-208ENST00000428599 MSRB1Q9NZV6 116 aa6.82□□□□□ -1.32
CTNND1-208ENST00000428599 ZNF706Q9Y5V0 76 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-208ENST00000428599 INAFM1C9JVW0 142 aa6.81□□□□□ -1.32
CTNND1-208ENST00000428599 PRAC2D3DTV9 90 aa6.81□□□□□ -1.32
CTNND1-208ENST00000428599 J3KT08 172 aa6.81□□□□□ -1.32
CTNND1-208ENST00000428599 ANKRD39Q53RE8 183 aa6.81□□□□□ -1.32
CTNND1-208ENST00000428599 ODF3L1Q8IXM7 274 aa6.81□□□□□ -1.32
CTNND1-208ENST00000428599 TNFRSF13BO14836 293 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-208ENST00000428599 FAM222AQ5U5X8 452 aa6.81□□□□□ -1.32
CTNND1-208ENST00000428599 Q8N7P7 452 aa6.81□□□□□ -1.32
CTNND1-208ENST00000428599 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-208ENST00000428599 IGKV1D-37A0A075B6S9 117 aa6.81□□□□□ -1.32
CTNND1-208ENST00000428599 ZFAND2AQ8N6M9 145 aa6.81□□□□□ -1.32
CTNND1-208ENST00000428599 SPG11Q96JI7 2443 aa6.8□□□□□ -1.32
CTNND1-208ENST00000428599 FAM236AA0A1B0GUQ0 79 aa6.8□□□□□ -1.32
CTNND1-208ENST00000428599 FAM236BA0A1B0GV22 79 aa6.8□□□□□ -1.32
CTNND1-208ENST00000428599 TAX1BP3O14907 124 aa6.8□□□□□ -1.32
CTNND1-208ENST00000428599 TRAV10A0A0B4J240 114 aa6.8□□□□□ -1.32
CTNND1-208ENST00000428599 NOTCH2Q04721 2471 aa6.8□□□□□ -1.32
CTNND1-208ENST00000428599 PRR15LQ9BU68 103 aa6.8□□□□□ -1.32
CTNND1-208ENST00000428599 LYPD6BQ8NI32 183 aa6.8□□□□□ -1.32
CTNND1-208ENST00000428599 PTPRSQ13332 1948 aa6.8□□□□□ -1.32
CTNND1-208ENST00000428599 SPTSSBQ8NFR3 76 aa6.8□□□□□ -1.32
CTNND1-208ENST00000428599 CHCHD10Q8WYQ3 142 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-208ENST00000428599 MDFICQ9P1T7 246 aa6.8□□□□□ -1.32
CTNND1-208ENST00000428599 H7C423 109 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 LINC00322Q6ZN03 302 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-208ENST00000428599 IGKV2D-26A0A0A0MRZ7 120 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 E9PLD3 99 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 UBE2D3P61077 147 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 FAM19A5Q7Z5A7 132 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-208ENST00000428599 ZNF843Q8N446 348 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 CLEC2BQ92478 149 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-208ENST00000428599 LINC01548A6NM66 108 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 CRYGBP07316 175 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 MIFP14174 115 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 PATE2Q6UY27 113 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 Q6YL49 198 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 C20orf203Q8NBC4 194 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms