RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 IFNA1P01562 189 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 BCL2P10415 239 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 GNG4P50150 75 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 RAB4BP61018 213 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 UBE2D3P61077 147 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 UBE2D2P62837 147 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 RPL36AP83881 106 aaKnown RBP6.33□□□□□ -1.4
TRIM39-208ENST00000428555 MAPKAPK5-AS1Q8N8E1 139 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 OR2D3Q8NGH3 330 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 RPL36ALQ969Q0 106 aaKnown RBP6.33□□□□□ -1.4
TRIM39-208ENST00000428555 VAX2Q9UIW0 290 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 TRBV20OR9-2A0A075B6H5 130 aa6.32□□□□□ -1.4
TRIM39-208ENST00000428555 TRBV7-3A0A075B6L6 115 aa6.32□□□□□ -1.4
TRIM39-208ENST00000428555 C19orf71A6NCJ1 209 aa6.32□□□□□ -1.4
TRIM39-208ENST00000428555 F5H697 171 aa6.32□□□□□ -1.4
TRIM39-208ENST00000428555 ZNF56Q15929 161 aa6.32□□□□□ -1.4
TRIM39-208ENST00000428555 ALKAL2Q6UX46 152 aa6.32□□□□□ -1.4
TRIM39-208ENST00000428555 KIF25-AS1Q9Y6Z4 181 aa6.32□□□□□ -1.4
TRIM39-208ENST00000428555 A0A1B0GVG6 124 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 IGLC6P0CF74 106 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 KRTAP10-1P60331 282 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 RPS20P60866 119 aaKnown RBP6.31□□□□□ -1.4
TRIM39-208ENST00000428555 CDPF1Q6NVV7 123 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 NIT1Q86X76 327 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 FER1L6-AS1Q8NA97 138 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 NEXN-AS1Q8NBZ9 246 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 NUDT10Q8NFP7 164 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 OR10G8Q8NGN5 311 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 NUDT11Q96G61 164 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 DNAJC30Q96LL9 226 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 C1orf43Q9BWL3 253 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 TM2D2Q9BX73 214 aa6.31□□□□□ -1.4
TRIM39-208ENST00000428555 TRAV8-3A0A0A6YYJ7 113 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 LOC105371267A0A1B0GV96 52 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 TMEM262E9PQX1 116 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 P01737 135 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 SMIM17P0DL12 118 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 GCSHP23434 173 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 SMCPP49901 116 aaPredicted RBP6.3□□□□□ -1.4
TRIM39-208ENST00000428555 NKX2-5P52952 324 aaPredicted RBP6.3□□□□□ -1.4
TRIM39-208ENST00000428555 XGP55808 180 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 BLOC1S1P78537 153 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 LAGE3Q14657 143 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 LYZL1Q6UWQ5 148 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 Q8N1X5 172 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 OCC1Q8TAD7 63 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 SMIM12Q96EX1 92 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 KLK12Q9UKR0 248 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 URGCP-MRPS24S4R325 110 aa6.3□□□□□ -1.4
TRIM39-208ENST00000428555 A0A087WX48 190 aa6.29□□□□□ -1.4
TRIM39-208ENST00000428555 TRBV6-8A0A0A6YYG3 113 aa6.29□□□□□ -1.4
TRIM39-208ENST00000428555 GAGE10A6NGK3 116 aa6.29□□□□□ -1.4
TRIM39-208ENST00000428555 F2Z2F3 143 aa6.29□□□□□ -1.4
TRIM39-208ENST00000428555 ZNF561-AS1K7EIQ3 104 aa6.29□□□□□ -1.4
TRIM39-208ENST00000428555 S100A1P23297 94 aa6.29□□□□□ -1.4
TRIM39-208ENST00000428555 WFDC2Q14508 124 aa6.29□□□□□ -1.4
TRIM39-208ENST00000428555 AP1S3Q96PC3 154 aa6.29□□□□□ -1.4
TRIM39-208ENST00000428555 BIN3Q9NQY0 253 aa6.29□□□□□ -1.4
TRIM39-208ENST00000428555 DNAH8Q96JB1 4490 aa6.29□□□□□ -1.4
TRIM39-208ENST00000428555 IGLV5-52A0A0A0MRZ9 124 aa6.28□□□□□ -1.4
TRIM39-208ENST00000428555 K7EN84 100 aa6.28□□□□□ -1.4
TRIM39-208ENST00000428555 M0QY20 66 aa6.28□□□□□ -1.4
TRIM39-208ENST00000428555 LECT2O14960 151 aa6.28□□□□□ -1.4
TRIM39-208ENST00000428555 NTF3P20783 257 aa6.28□□□□□ -1.4
TRIM39-208ENST00000428555 CACNG7P62955 275 aa6.28□□□□□ -1.4
TRIM39-208ENST00000428555 NTM-AS1Q6ZSK4 140 aa6.28□□□□□ -1.4
TRIM39-208ENST00000428555 Q8N814 137 aa6.28□□□□□ -1.4
TRIM39-208ENST00000428555 LYPD6BQ8NI32 183 aa6.28□□□□□ -1.4
TRIM39-208ENST00000428555 BAALCQ8WXS3 180 aa6.28□□□□□ -1.4
TRIM39-208ENST00000428555 UBE2WQ96B02 151 aa6.28□□□□□ -1.4
TRIM39-208ENST00000428555 RNASE7Q9H1E1 156 aaKnown RBP6.28□□□□□ -1.4
TRIM39-208ENST00000428555 J3QL48 77 aa6.27□□□□□ -1.41
TRIM39-208ENST00000428555 MGPP08493 103 aa6.27□□□□□ -1.41
TRIM39-208ENST00000428555 ELOBQ15370 118 aa6.27□□□□□ -1.41
TRIM39-208ENST00000428555 SUMO4Q6EEV6 95 aa6.27□□□□□ -1.41
TRIM39-208ENST00000428555 KCNIP4Q6PIL6 250 aa6.27□□□□□ -1.41
TRIM39-208ENST00000428555 CHCHD5Q9BSY4 110 aa6.27□□□□□ -1.41
TRIM39-208ENST00000428555 SRRM2Q9UQ35 2752 aaKnown RBP6.26□□□□□ -1.41
TRIM39-208ENST00000428555 IGKV2D-24A0A075B6R9 120 aa6.26□□□□□ -1.41
TRIM39-208ENST00000428555 TMEM250H0YL14 139 aa6.26□□□□□ -1.41
TRIM39-208ENST00000428555 CEBPGP53567 150 aa6.26□□□□□ -1.41
TRIM39-208ENST00000428555 TWIST1Q15672 202 aa6.26□□□□□ -1.41
TRIM39-208ENST00000428555 C15orf54Q8N8G6 183 aa6.26□□□□□ -1.41
TRIM39-208ENST00000428555 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.26□□□□□ -1.41
TRIM39-208ENST00000428555 NTN5Q8WTR8 489 aaPredicted RBP6.26□□□□□ -1.41
TRIM39-208ENST00000428555 RMI2Q96E14 147 aa6.26□□□□□ -1.41
TRIM39-208ENST00000428555 CHCHD7Q9BUK0 85 aa6.26□□□□□ -1.41
TRIM39-208ENST00000428555 RPP21Q9H633 154 aaKnown RBP6.26□□□□□ -1.41
TRIM39-208ENST00000428555 COX11Q9Y6N1 276 aa6.26□□□□□ -1.41
TRIM39-208ENST00000428555 H7C1H1 209 aa6.25□□□□□ -1.41
TRIM39-208ENST00000428555 TRGC1P0CF51 173 aa6.25□□□□□ -1.41
TRIM39-208ENST00000428555 GAGE6Q13070 117 aa6.25□□□□□ -1.41
TRIM39-208ENST00000428555 MPV17L2Q567V2 206 aa6.25□□□□□ -1.41
TRIM39-208ENST00000428555 ATRAIDQ6UW56 229 aa6.25□□□□□ -1.41
TRIM39-208ENST00000428555 ENHOQ6UWT2 76 aa6.25□□□□□ -1.41
TRIM39-208ENST00000428555 Q8N976 141 aa6.25□□□□□ -1.41
TRIM39-208ENST00000428555 DEFB104AQ8WTQ1 72 aa6.25□□□□□ -1.41
TRIM39-208ENST00000428555 GTSF1Q8WW33 167 aa6.25□□□□□ -1.41
TRIM39-208ENST00000428555 EIF5A2Q9GZV4 153 aaKnown RBP6.25□□□□□ -1.41
TRIM39-208ENST00000428555 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms