RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MUC4Q99102 2169 aa11.95□□□□□ -0.5
C9orf3-206ENST00000428313 IGLV4-3A0A075B6K6 122 aa11.95□□□□□ -0.5
C9orf3-206ENST00000428313 DAZ2Q13117 558 aaKnown RBP11.95□□□□□ -0.5
C9orf3-206ENST00000428313 DAZ4Q86SG3 579 aaKnown RBP11.95□□□□□ -0.5
C9orf3-206ENST00000428313 FAM110DQ8TAY7 271 aaPredicted RBP11.95□□□□□ -0.5
C9orf3-206ENST00000428313 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
C9orf3-206ENST00000428313 C20orf173Q96LM9 149 aa11.95□□□□□ -0.5
C9orf3-206ENST00000428313 DAZ1Q9NQZ3 744 aaKnown RBP11.95□□□□□ -0.5
C9orf3-206ENST00000428313 DAZ3Q9NR90 486 aaKnown RBP11.95□□□□□ -0.5
C9orf3-206ENST00000428313 IGHV3OR16-13A0A075B7E8 117 aa11.94□□□□□ -0.5
C9orf3-206ENST00000428313 IGHV3-74A0A0B4J1X5 117 aa11.94□□□□□ -0.5
C9orf3-206ENST00000428313 Q5XG85 94 aa11.94□□□□□ -0.5
C9orf3-206ENST00000428313 SERP2Q8N6R1 65 aa11.94□□□□□ -0.5
C9orf3-206ENST00000428313 UPK3BQ9BT76 320 aa11.94□□□□□ -0.5
C9orf3-206ENST00000428313 CYSTM1Q9H1C7 97 aa11.94□□□□□ -0.5
C9orf3-206ENST00000428313 CFAP47Q6ZTR5 3102 aa11.94□□□□□ -0.5
C9orf3-206ENST00000428313 MRPS36P82909 103 aaKnown RBP11.94□□□□□ -0.5
C9orf3-206ENST00000428313 PRRC2AP48634 2157 aaKnown RBP11.93□□□□□ -0.5
C9orf3-206ENST00000428313 F5H697 171 aa11.93□□□□□ -0.5
C9orf3-206ENST00000428313 OXTP01178 125 aa11.93□□□□□ -0.5
C9orf3-206ENST00000428313 Q8N6K4 173 aa11.93□□□□□ -0.5
C9orf3-206ENST00000428313 C4orf26Q17RF5 130 aa11.92□□□□□ -0.5
C9orf3-206ENST00000428313 IGHV7-81A0A0B4J1V7 117 aa11.91□□□□□ -0.5
C9orf3-206ENST00000428313 TIRAPP58753 221 aa11.91□□□□□ -0.5
C9orf3-206ENST00000428313 BSPH1Q075Z2 132 aa11.91□□□□□ -0.5
C9orf3-206ENST00000428313 BEAN1Q3B7T3 259 aa11.91□□□□□ -0.5
C9orf3-206ENST00000428313 ZZEF1O43149 2961 aa11.91□□□□□ -0.5
C9orf3-206ENST00000428313 VSIG2Q96IQ7 327 aa11.91□□□□□ -0.5
C9orf3-206ENST00000428313 CCDC140Q96MF4 163 aa11.91□□□□□ -0.5
C9orf3-206ENST00000428313 IGHV3-49A0A0A0MS15 119 aa11.9□□□□□ -0.5
C9orf3-206ENST00000428313 ODF3BA8MYP8 253 aa11.9□□□□□ -0.5
C9orf3-206ENST00000428313 UCNP55089 124 aa11.9□□□□□ -0.5
C9orf3-206ENST00000428313 LY6G5BQ8NDX9 201 aa11.9□□□□□ -0.5
C9orf3-206ENST00000428313 JPT2Q9H910 190 aa11.9□□□□□ -0.5
C9orf3-206ENST00000428313 PYGO1Q9Y3Y4 419 aa11.9□□□□□ -0.5
C9orf3-206ENST00000428313 TECTAO75443 2155 aa11.9□□□□□ -0.5
C9orf3-206ENST00000428313 A0A087WWL8 130 aa11.9□□□□□ -0.5
C9orf3-206ENST00000428313 BAALC-AS2P0C853 105 aa11.9□□□□□ -0.5
C9orf3-206ENST00000428313 HRCT1Q6UXD1 115 aa11.9□□□□□ -0.5
C9orf3-206ENST00000428313 IGHV3OR16-10A0A075B7F0 116 aa11.89□□□□□ -0.51
C9orf3-206ENST00000428313 NPC2P61916 151 aa11.89□□□□□ -0.51
C9orf3-206ENST00000428313 CLEC19AQ6UXS0 136 aa11.89□□□□□ -0.51
C9orf3-206ENST00000428313 DSCR8Q96T75 97 aa11.89□□□□□ -0.51
C9orf3-206ENST00000428313 M0QY20 66 aa11.89□□□□□ -0.51
C9orf3-206ENST00000428313 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
C9orf3-206ENST00000428313 M0R1W7 72 aa11.88□□□□□ -0.51
C9orf3-206ENST00000428313 C22orf24Q9Y442 160 aa11.88□□□□□ -0.51
C9orf3-206ENST00000428313 PRRC2CQ9Y520 2896 aaKnown RBP11.88□□□□□ -0.51
C9orf3-206ENST00000428313 K7ENP7 123 aa11.88□□□□□ -0.51
C9orf3-206ENST00000428313 Q6JHZ5 121 aa11.88□□□□□ -0.51
C9orf3-206ENST00000428313 IGFL3Q6UXB1 125 aa11.88□□□□□ -0.51
C9orf3-206ENST00000428313 SOCS3O14543 225 aa11.87□□□□□ -0.51
C9orf3-206ENST00000428313 RPL11P62913 178 aaKnown RBP11.86□□□□□ -0.51
C9orf3-206ENST00000428313 TINCRA0A1B0GVN0 87 aa11.86□□□□□ -0.51
C9orf3-206ENST00000428313 NDUFC2-KCTD14E9PQ53 114 aa11.86□□□□□ -0.51
C9orf3-206ENST00000428313 TRAV12-3A0A0B4J271 114 aa11.85□□□□□ -0.51
C9orf3-206ENST00000428313 CD28P10747 220 aa11.85□□□□□ -0.51
C9orf3-206ENST00000428313 ZNF415Q09FC8 603 aa11.85□□□□□ -0.51
C9orf3-206ENST00000428313 DMDP11532 3685 aa11.85□□□□□ -0.51
C9orf3-206ENST00000428313 B9A039 149 aa11.85□□□□□ -0.51
C9orf3-206ENST00000428313 KLRB1Q12918 225 aa11.84□□□□□ -0.51
C9orf3-206ENST00000428313 COPS9Q8WXC6 57 aa11.84□□□□□ -0.51
C9orf3-206ENST00000428313 KLLNB2CW77 178 aa11.84□□□□□ -0.51
C9orf3-206ENST00000428313 NDUFA1O15239 70 aa11.84□□□□□ -0.51
C9orf3-206ENST00000428313 CIRBPQ14011 172 aaKnown RBP11.84□□□□□ -0.51
C9orf3-206ENST00000428313 ECSCRQ19T08 205 aa11.84□□□□□ -0.51
C9orf3-206ENST00000428313 Q8N9W7 124 aa11.84□□□□□ -0.51
C9orf3-206ENST00000428313 FAM104AQ969W3 186 aa11.84□□□□□ -0.51
C9orf3-206ENST00000428313 FAM74A4Q5TZK3 123 aa11.83□□□□□ -0.52
C9orf3-206ENST00000428313 LINC00308Q8TCZ7 52 aa11.83□□□□□ -0.52
C9orf3-206ENST00000428313 MALP21145 153 aa11.82□□□□□ -0.52
C9orf3-206ENST00000428313 SYNJ2BPP57105 145 aa11.82□□□□□ -0.52
C9orf3-206ENST00000428313 C9orf85Q96MD7 179 aa11.82□□□□□ -0.52
C9orf3-206ENST00000428313 RNF152Q8N8N0 203 aa11.81□□□□□ -0.52
C9orf3-206ENST00000428313 MUC3AQ02505 3323 aa11.81□□□□□ -0.52
C9orf3-206ENST00000428313 WNK2Q9Y3S1 2297 aa11.81□□□□□ -0.52
C9orf3-206ENST00000428313 USP17L23D6RBM5 183 aa11.8□□□□□ -0.52
C9orf3-206ENST00000428313 E7EQL1 145 aa11.8□□□□□ -0.52
C9orf3-206ENST00000428313 KALRNO60229 2985 aa11.8□□□□□ -0.52
C9orf3-206ENST00000428313 NDUFC2O95298 119 aa11.8□□□□□ -0.52
C9orf3-206ENST00000428313 DNAL4O96015 105 aa11.8□□□□□ -0.52
C9orf3-206ENST00000428313 DEFB109BQ30KR1 87 aa11.8□□□□□ -0.52
C9orf3-206ENST00000428313 PRIMA1Q86XR5 153 aa11.8□□□□□ -0.52
C9orf3-206ENST00000428313 PRO0628Q9UI54 55 aa11.8□□□□□ -0.52
C9orf3-206ENST00000428313 ATP6V0E1O15342 81 aa11.8□□□□□ -0.52
C9orf3-206ENST00000428313 DEFB1P60022 68 aa11.8□□□□□ -0.52
C9orf3-206ENST00000428313 MINOS1Q5TGZ0 78 aa11.8□□□□□ -0.52
C9orf3-206ENST00000428313 A8MZ25 164 aa11.79□□□□□ -0.52
C9orf3-206ENST00000428313 LYNX1G3V0Z9 82 aa11.79□□□□□ -0.52
C9orf3-206ENST00000428313 LYNX1P0DP58 116 aa11.79□□□□□ -0.52
C9orf3-206ENST00000428313 MINOS1-NBL1R4GNA1 71 aa11.79□□□□□ -0.52
C9orf3-206ENST00000428313 F6UB75 175 aa11.78□□□□□ -0.52
C9orf3-206ENST00000428313 Q8N2B8 174 aa11.78□□□□□ -0.52
C9orf3-206ENST00000428313 ROS1P08922 2347 aa11.78□□□□□ -0.52
C9orf3-206ENST00000428313 NACAE9PAV3 2078 aa11.78□□□□□ -0.52
C9orf3-206ENST00000428313 IGHV3-16A0A0C4DH30 117 aa11.77□□□□□ -0.52
C9orf3-206ENST00000428313 LINC01561Q8N1V8 128 aa11.77□□□□□ -0.52
C9orf3-206ENST00000428313 OVOL2Q9BRP0 275 aa11.77□□□□□ -0.52
C9orf3-206ENST00000428313 FAM218AQ96MZ4 157 aa11.77□□□□□ -0.53
C9orf3-206ENST00000428313 PKDREJQ9NTG1 2253 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms