RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 MGPP08493 103 aa11.2□□□□□ -0.62
VRK2-204ENST00000428021 TRGC1P0CF51 173 aa11.2□□□□□ -0.62
VRK2-204ENST00000428021 KRTAP10-2P60368 255 aa11.2□□□□□ -0.62
VRK2-204ENST00000428021 ERVFC1-1P60608 527 aa11.2□□□□□ -0.62
VRK2-204ENST00000428021 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
VRK2-204ENST00000428021 SPATA12Q7Z6I5 190 aa11.2□□□□□ -0.62
VRK2-204ENST00000428021 A8MWL6 223 aa11.19□□□□□ -0.62
VRK2-204ENST00000428021 CT83Q5H943 113 aa11.19□□□□□ -0.62
VRK2-204ENST00000428021 NIT1Q86X76 327 aa11.19□□□□□ -0.62
VRK2-204ENST00000428021 C16orf90A8MZG2 172 aa11.18□□□□□ -0.62
VRK2-204ENST00000428021 FOXA3P55318 350 aaPredicted RBP11.18□□□□□ -0.62
VRK2-204ENST00000428021 TWIST1Q15672 202 aa11.18□□□□□ -0.62
VRK2-204ENST00000428021 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
VRK2-204ENST00000428021 DPH3P1Q9H4G8 78 aa11.18□□□□□ -0.62
VRK2-204ENST00000428021 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
VRK2-204ENST00000428021 OSTCQ9NRP0 149 aa11.18□□□□□ -0.62
VRK2-204ENST00000428021 A0A087WTM6 91 aa11.17□□□□□ -0.62
VRK2-204ENST00000428021 TRBV6-8A0A0A6YYG3 113 aa11.17□□□□□ -0.62
VRK2-204ENST00000428021 LAGE3Q14657 143 aa11.17□□□□□ -0.62
VRK2-204ENST00000428021 PEA15Q15121 130 aa11.17□□□□□ -0.62
VRK2-204ENST00000428021 FAM74A3Q4VXF1 159 aa11.17□□□□□ -0.62
VRK2-204ENST00000428021 PGLYRP4Q96LB8 373 aa11.17□□□□□ -0.62
VRK2-204ENST00000428021 Q9HAA7 133 aa11.17□□□□□ -0.62
VRK2-204ENST00000428021 TMEM241Q24JQ0 296 aa11.16□□□□□ -0.62
VRK2-204ENST00000428021 NTM-AS1Q6ZSK4 140 aa11.16□□□□□ -0.62
VRK2-204ENST00000428021 ISOC2Q96AB3 205 aa11.16□□□□□ -0.62
VRK2-204ENST00000428021 DNAJC30Q96LL9 226 aa11.16□□□□□ -0.62
VRK2-204ENST00000428021 SMDT1Q9H4I9 107 aa11.16□□□□□ -0.62
VRK2-204ENST00000428021 RYR1P21817 5038 aa11.15□□□□□ -0.62
VRK2-204ENST00000428021 H7C1H1 209 aa11.15□□□□□ -0.62
VRK2-204ENST00000428021 RPL23P62829 140 aaKnown RBP11.15□□□□□ -0.62
VRK2-204ENST00000428021 RASL11AQ6T310 242 aa11.15□□□□□ -0.62
VRK2-204ENST00000428021 TSKUQ8WUA8 353 aa11.15□□□□□ -0.62
VRK2-204ENST00000428021 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
VRK2-204ENST00000428021 V9GYV3 84 aa11.14□□□□□ -0.63
VRK2-204ENST00000428021 APOBP04114 4563 aaKnown RBP11.14□□□□□ -0.63
VRK2-204ENST00000428021 LRCOL1A6NCL2 159 aa11.13□□□□□ -0.63
VRK2-204ENST00000428021 FUSP35637 526 aaKnown RBP eCLIP11.13□□□□□ -0.63
VRK2-204ENST00000428021 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.13□□□□□ -0.63
VRK2-204ENST00000428021 GATD1Q8NB37 220 aa11.13□□□□□ -0.63
VRK2-204ENST00000428021 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
VRK2-204ENST00000428021 NIT2Q9NQR4 276 aa11.13□□□□□ -0.63
VRK2-204ENST00000428021 NAT8Q9UHE5 227 aa11.13□□□□□ -0.63
VRK2-204ENST00000428021 URGCP-MRPS24S4R325 110 aa11.13□□□□□ -0.63
VRK2-204ENST00000428021 TRAV8-3A0A0A6YYJ7 113 aa11.12□□□□□ -0.63
VRK2-204ENST00000428021 FAM231BA6NCW3 169 aa11.12□□□□□ -0.63
VRK2-204ENST00000428021 HIGD1CA8MV81 97 aa11.12□□□□□ -0.63
VRK2-204ENST00000428021 EREGO14944 169 aa11.12□□□□□ -0.63
VRK2-204ENST00000428021 TMEM97Q5BJF2 176 aa11.12□□□□□ -0.63
VRK2-204ENST00000428021 C15orf54Q8N8G6 183 aa11.12□□□□□ -0.63
VRK2-204ENST00000428021 KLK12Q9UKR0 248 aa11.12□□□□□ -0.63
VRK2-204ENST00000428021 HSPG2P98160 4391 aa11.11□□□□□ -0.63
VRK2-204ENST00000428021 A0A087WX48 190 aa11.11□□□□□ -0.63
VRK2-204ENST00000428021 TRAV26-2A0A0B4J265 109 aa11.11□□□□□ -0.63
VRK2-204ENST00000428021 PSCAO43653 123 aa11.11□□□□□ -0.63
VRK2-204ENST00000428021 ADIRFQ15847 76 aa11.11□□□□□ -0.63
VRK2-204ENST00000428021 PGPEP1Q9NXJ5 209 aa11.11□□□□□ -0.63
VRK2-204ENST00000428021 A0A1B0GUT8 65 aa11.1□□□□□ -0.63
VRK2-204ENST00000428021 TMEM262E9PQX1 116 aa11.1□□□□□ -0.63
VRK2-204ENST00000428021 IQCJQ1A5X6 159 aa11.1□□□□□ -0.63
VRK2-204ENST00000428021 MPV17L2Q567V2 206 aa11.1□□□□□ -0.63
VRK2-204ENST00000428021 SMIM15Q7Z3B0 74 aa11.1□□□□□ -0.63
VRK2-204ENST00000428021 CHCHD5Q9BSY4 110 aa11.1□□□□□ -0.63
VRK2-204ENST00000428021 MAPKAPK5-AS1Q8N8E1 139 aa11.09□□□□□ -0.63
VRK2-204ENST00000428021 NUP35Q8NFH5 326 aa11.09□□□□□ -0.63
VRK2-204ENST00000428021 FRZBQ92765 325 aa11.09□□□□□ -0.63
VRK2-204ENST00000428021 TM2D2Q9BX73 214 aa11.09□□□□□ -0.63
VRK2-204ENST00000428021 TRBV25-1A0A075B6N4 114 aa11.08□□□□□ -0.64
VRK2-204ENST00000428021 ELOBQ15370 118 aa11.08□□□□□ -0.64
VRK2-204ENST00000428021 KCNIP4Q6PIL6 250 aa11.08□□□□□ -0.64
VRK2-204ENST00000428021 ATRAIDQ6UW56 229 aa11.08□□□□□ -0.64
VRK2-204ENST00000428021 UBE2WQ96B02 151 aa11.08□□□□□ -0.64
VRK2-204ENST00000428021 BORCS7Q96B45 105 aa11.08□□□□□ -0.64
VRK2-204ENST00000428021 RPL39LQ96EH5 51 aaKnown RBP11.08□□□□□ -0.64
VRK2-204ENST00000428021 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
VRK2-204ENST00000428021 RAB14P61106 215 aa11.07□□□□□ -0.64
VRK2-204ENST00000428021 GAGE6Q13070 117 aa11.07□□□□□ -0.64
VRK2-204ENST00000428021 WFDC2Q14508 124 aa11.07□□□□□ -0.64
VRK2-204ENST00000428021 CDPF1Q6NVV7 123 aa11.07□□□□□ -0.64
VRK2-204ENST00000428021 ENHOQ6UWT2 76 aa11.07□□□□□ -0.64
VRK2-204ENST00000428021 Q8N976 141 aa11.07□□□□□ -0.64
VRK2-204ENST00000428021 DEFB104AQ8WTQ1 72 aa11.07□□□□□ -0.64
VRK2-204ENST00000428021 TMEM191AQ9H0A3 160 aa11.07□□□□□ -0.64
VRK2-204ENST00000428021 SMIM27A0A1W2PRY6 76 aa11.06□□□□□ -0.64
VRK2-204ENST00000428021 CDK2AP2O75956 126 aa11.06□□□□□ -0.64
VRK2-204ENST00000428021 GAS8-AS1O95177 125 aa11.06□□□□□ -0.64
VRK2-204ENST00000428021 PKIAP61925 76 aa11.06□□□□□ -0.64
VRK2-204ENST00000428021 RBX1P62877 108 aa11.06□□□□□ -0.64
VRK2-204ENST00000428021 IFITM2Q01629 132 aa11.06□□□□□ -0.64
VRK2-204ENST00000428021 RNF185Q96GF1 192 aa11.06□□□□□ -0.64
VRK2-204ENST00000428021 CLLU1Q5K131 121 aa11.05□□□□□ -0.64
VRK2-204ENST00000428021 Q8N814 137 aa11.05□□□□□ -0.64
VRK2-204ENST00000428021 NAT8BQ9UHF3 227 aa11.05□□□□□ -0.64
VRK2-204ENST00000428021 IGKV2D-24A0A075B6R9 120 aa11.04□□□□□ -0.64
VRK2-204ENST00000428021 ANGP03950 147 aaKnown RBP11.04□□□□□ -0.64
VRK2-204ENST00000428021 RAB4AP20338 218 aa11.04□□□□□ -0.64
VRK2-204ENST00000428021 Q0VG73 95 aa11.04□□□□□ -0.64
VRK2-204ENST00000428021 RIGQ13278 110 aa11.04□□□□□ -0.64
VRK2-204ENST00000428021 RMI2Q96E14 147 aa11.04□□□□□ -0.64
VRK2-204ENST00000428021 TMEM243Q9BU79 118 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms