RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 K7EN84 100 aa7.41□□□□□ -1.22
USP49-204ENST00000423567 GATCO43716 136 aaKnown RBP7.41□□□□□ -1.22
USP49-204ENST00000423567 MGPP08493 103 aa7.41□□□□□ -1.22
USP49-204ENST00000423567 ERVFC1-1P60608 527 aa7.41□□□□□ -1.22
USP49-204ENST00000423567 TEX261Q6UWH6 196 aa7.41□□□□□ -1.22
USP49-204ENST00000423567 OR10G8Q8NGN5 311 aa7.41□□□□□ -1.22
USP49-204ENST00000423567 Q9UF83 564 aa7.41□□□□□ -1.22
USP49-204ENST00000423567 URGCP-MRPS24S4R325 110 aa7.41□□□□□ -1.22
USP49-204ENST00000423567 C16orf90A8MZG2 172 aa7.4□□□□□ -1.22
USP49-204ENST00000423567 PSCAO43653 123 aa7.4□□□□□ -1.22
USP49-204ENST00000423567 CTRLP40313 264 aa7.4□□□□□ -1.22
USP49-204ENST00000423567 UBE2D3P61077 147 aa7.4□□□□□ -1.22
USP49-204ENST00000423567 UBE2D2P62837 147 aa7.4□□□□□ -1.22
USP49-204ENST00000423567 WDR73Q6P4I2 378 aa7.4□□□□□ -1.22
USP49-204ENST00000423567 Q6ZRN7 208 aaPredicted RBP7.4□□□□□ -1.22
USP49-204ENST00000423567 FAM231DQ6ZW35 169 aa7.4□□□□□ -1.22
USP49-204ENST00000423567 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.22
USP49-204ENST00000423567 NEXN-AS1Q8NBZ9 246 aa7.4□□□□□ -1.22
USP49-204ENST00000423567 TNFRSF18Q9Y5U5 241 aa7.4□□□□□ -1.22
USP49-204ENST00000423567 HECTD4Q9Y4D8 3996 aa7.4□□□□□ -1.23
USP49-204ENST00000423567 A8MWL6 223 aa7.39□□□□□ -1.23
USP49-204ENST00000423567 IBA57-AS1B1ANH7 110 aa7.39□□□□□ -1.23
USP49-204ENST00000423567 SRP19P09132 144 aaKnown RBP7.39□□□□□ -1.23
USP49-204ENST00000423567 NTF3P20783 257 aa7.39□□□□□ -1.23
USP49-204ENST00000423567 TWIST1Q15672 202 aa7.39□□□□□ -1.23
USP49-204ENST00000423567 TMEM97Q5BJF2 176 aa7.39□□□□□ -1.23
USP49-204ENST00000423567 SMIM15Q7Z3B0 74 aa7.39□□□□□ -1.23
USP49-204ENST00000423567 SPATA12Q7Z6I5 190 aa7.39□□□□□ -1.23
USP49-204ENST00000423567 DPH3P1Q9H4G8 78 aa7.39□□□□□ -1.23
USP49-204ENST00000423567 KIF25-AS1Q9Y6Z4 181 aa7.39□□□□□ -1.23
USP49-204ENST00000423567 A0A087WX48 190 aa7.38□□□□□ -1.23
USP49-204ENST00000423567 LAGE3Q14657 143 aa7.38□□□□□ -1.23
USP49-204ENST00000423567 PEA15Q15121 130 aa7.38□□□□□ -1.23
USP49-204ENST00000423567 FAM74A3Q4VXF1 159 aa7.38□□□□□ -1.23
USP49-204ENST00000423567 CT83Q5H943 113 aa7.38□□□□□ -1.23
USP49-204ENST00000423567 DAZ4Q86SG3 579 aaKnown RBP7.38□□□□□ -1.23
USP49-204ENST00000423567 LINC01551Q86U37 167 aa7.38□□□□□ -1.23
USP49-204ENST00000423567 C15orf54Q8N8G6 183 aa7.38□□□□□ -1.23
USP49-204ENST00000423567 BORCS7Q96B45 105 aa7.38□□□□□ -1.23
USP49-204ENST00000423567 DNAJC30Q96LL9 226 aa7.38□□□□□ -1.23
USP49-204ENST00000423567 Q9HAA7 133 aa7.38□□□□□ -1.23
USP49-204ENST00000423567 DAZ3Q9NR90 486 aaKnown RBP7.38□□□□□ -1.23
USP49-204ENST00000423567 TRAV8-3A0A0A6YYJ7 113 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 TMEM262E9PQX1 116 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 PKIAP61925 76 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 ELOBQ15370 118 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 TMEM241Q24JQ0 296 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 LCE3BQ5TA77 95 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 CHCHD7Q9BUK0 85 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 TM2D2Q9BX73 214 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 CNFNQ9BYD5 112 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 SMDT1Q9H4I9 107 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 DNAH11Q96DT5 4516 aa7.37□□□□□ -1.23
USP49-204ENST00000423567 TRBV6-8A0A0A6YYG3 113 aa7.36□□□□□ -1.23
USP49-204ENST00000423567 M0QY20 66 aa7.36□□□□□ -1.23
USP49-204ENST00000423567 RAB14P61106 215 aa7.36□□□□□ -1.23
USP49-204ENST00000423567 RASL11AQ6T310 242 aa7.36□□□□□ -1.23
USP49-204ENST00000423567 NIT1Q86X76 327 aa7.36□□□□□ -1.23
USP49-204ENST00000423567 GTSF1Q8WW33 167 aa7.36□□□□□ -1.23
USP49-204ENST00000423567 RMI2Q96E14 147 aa7.36□□□□□ -1.23
USP49-204ENST00000423567 OSTCQ9NRP0 149 aa7.36□□□□□ -1.23
USP49-204ENST00000423567 A0A087WTM6 91 aa7.35□□□□□ -1.23
USP49-204ENST00000423567 TSKUQ8WUA8 353 aa7.35□□□□□ -1.23
USP49-204ENST00000423567 PGLYRP4Q96LB8 373 aa7.35□□□□□ -1.23
USP49-204ENST00000423567 CHCHD5Q9BSY4 110 aa7.35□□□□□ -1.23
USP49-204ENST00000423567 GFRA4Q9GZZ7 299 aa7.35□□□□□ -1.23
USP49-204ENST00000423567 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
USP49-204ENST00000423567 COX11Q9Y6N1 276 aa7.35□□□□□ -1.23
USP49-204ENST00000423567 DYNC1H1Q14204 4646 aaKnown RBP7.34□□□□□ -1.23
USP49-204ENST00000423567 TRBV25-1A0A075B6N4 114 aa7.34□□□□□ -1.23
USP49-204ENST00000423567 FAM231BA6NCW3 169 aa7.34□□□□□ -1.23
USP49-204ENST00000423567 FOXA3P55318 350 aaPredicted RBP7.34□□□□□ -1.23
USP49-204ENST00000423567 KRTAP10-2P60368 255 aa7.34□□□□□ -1.23
USP49-204ENST00000423567 ADIRFQ15847 76 aa7.34□□□□□ -1.23
USP49-204ENST00000423567 NIT2Q9NQR4 276 aa7.34□□□□□ -1.23
USP49-204ENST00000423567 PKD1P98161 4303 aa7.33□□□□□ -1.24
USP49-204ENST00000423567 IGHV1-24A0A0C4DH33 117 aa7.33□□□□□ -1.24
USP49-204ENST00000423567 A0A1B0GUT8 65 aa7.33□□□□□ -1.24
USP49-204ENST00000423567 HIGD1CA8MV81 97 aa7.33□□□□□ -1.24
USP49-204ENST00000423567 CRPP02741 224 aa7.33□□□□□ -1.24
USP49-204ENST00000423567 RPL23P62829 140 aaKnown RBP7.33□□□□□ -1.24
USP49-204ENST00000423567 Q0VG73 95 aa7.33□□□□□ -1.24
USP49-204ENST00000423567 FRZBQ92765 325 aa7.33□□□□□ -1.24
USP49-204ENST00000423567 ISOC2Q96AB3 205 aa7.33□□□□□ -1.24
USP49-204ENST00000423567 UBE2WQ96B02 151 aa7.33□□□□□ -1.24
USP49-204ENST00000423567 KLK12Q9UKR0 248 aa7.33□□□□□ -1.24
USP49-204ENST00000423567 SRSF3P84103 164 aaKnown RBP7.32□□□□□ -1.24
USP49-204ENST00000423567 IGKV2D-24A0A075B6R9 120 aa7.31□□□□□ -1.24
USP49-204ENST00000423567 TRAV26-2A0A0B4J265 109 aa7.31□□□□□ -1.24
USP49-204ENST00000423567 C9JQL5 133 aa7.31□□□□□ -1.24
USP49-204ENST00000423567 ANGP03950 147 aaKnown RBP7.31□□□□□ -1.24
USP49-204ENST00000423567 GAGE6Q13070 117 aa7.31□□□□□ -1.24
USP49-204ENST00000423567 RIGQ13278 110 aa7.31□□□□□ -1.24
USP49-204ENST00000423567 COTL1Q14019 142 aa7.31□□□□□ -1.24
USP49-204ENST00000423567 IQCJQ1A5X6 159 aa7.31□□□□□ -1.24
USP49-204ENST00000423567 NAT8BQ9UHF3 227 aa7.31□□□□□ -1.24
USP49-204ENST00000423567 V9GYV3 84 aa7.31□□□□□ -1.24
USP49-204ENST00000423567 KIAA1109Q2LD37 5005 aa7.31□□□□□ -1.24
USP49-204ENST00000423567 HERC2O95714 4834 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms