RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 TRBV6-5A0A0K0K1A5 114 aa4.53□□□□□ -1.68
CHD2-202ENST00000420239 SDHAF1A6NFY7 115 aa4.53□□□□□ -1.68
CHD2-202ENST00000420239 I3L3M4 83 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 OXTP01178 125 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 IGHV1-69P01742 117 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 RNASE3P12724 160 aaKnown RBP4.52□□□□□ -1.69
CHD2-202ENST00000420239 ADAMTSL4-AS1Q5T5F5 129 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 C9orf139Q6ZV77 190 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 SPANXDQ9BXN6 97 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 PRO3102Q9H379 93 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 ZZEF1O43149 2961 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 VCYO14598 125 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 OVOL1O14753 267 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 COX7CP15954 63 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 DEFB1P60022 68 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 DEFB109BQ30KR1 87 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 MINOS1Q5TGZ0 78 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 SUMO4Q6EEV6 95 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 DCANP1Q8TF63 244 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 JPT2Q9H910 190 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 PHLDA3Q9Y5J5 127 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 MINOS1-NBL1R4GNA1 71 aa4.52□□□□□ -1.69
CHD2-202ENST00000420239 DSPP15924 2871 aaKnown RBP4.51□□□□□ -1.69
CHD2-202ENST00000420239 TRAV8-3A0A0A6YYJ7 113 aa4.51□□□□□ -1.69
CHD2-202ENST00000420239 A0A0J9YXV3 536 aa4.51□□□□□ -1.69
CHD2-202ENST00000420239 GNRH2O43555 120 aa4.51□□□□□ -1.69
CHD2-202ENST00000420239 S100A4P26447 101 aaKnown RBP4.51□□□□□ -1.69
CHD2-202ENST00000420239 SDIM1Q6ZPB5 146 aa4.51□□□□□ -1.69
CHD2-202ENST00000420239 C5orf38Q86SI9 138 aa4.51□□□□□ -1.69
CHD2-202ENST00000420239 TMEM219Q86XT9 240 aa4.51□□□□□ -1.69
CHD2-202ENST00000420239 Q8N9W7 124 aa4.51□□□□□ -1.69
CHD2-202ENST00000420239 UBTD1Q9HAC8 227 aa4.51□□□□□ -1.69
CHD2-202ENST00000420239 SPANXCQ9NY87 97 aa4.51□□□□□ -1.69
CHD2-202ENST00000420239 ARHGAP32A7KAX9 2087 aa4.51□□□□□ -1.69
CHD2-202ENST00000420239 CUL9Q8IWT3 2517 aa4.51□□□□□ -1.69
CHD2-202ENST00000420239 SPENQ96T58 3664 aaKnown RBP4.5□□□□□ -1.69
CHD2-202ENST00000420239 TRAV41A0A0B4J266 112 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 TRBV27A0A0K0K1C4 114 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 SOCS3O14543 225 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 CRYGAP11844 174 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 NPC2P61916 151 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 HIST1H4AP62805 103 aaKnown RBP4.5□□□□□ -1.69
CHD2-202ENST00000420239 RPS28P62857 69 aaKnown RBP4.5□□□□□ -1.69
CHD2-202ENST00000420239 RHOHQ15669 191 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 C15orf32Q32M92 178 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 GAGE2AQ6NT46 116 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 VMO1Q7Z5L0 202 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 LINC00643Q86TS7 51 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 KIR2DL5BQ8NHK3 375 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 WDFY4Q6ZS81 3184 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 TRBV7-1A0A0A6YYK4 115 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 hADV29S1A0JD25 119 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 ATP5G1P05496 136 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 ACYP1P07311 99 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 MIAQ16674 131 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 NSUN5P1Q3KNT7 163 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 TMEM61Q8N0U2 210 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 OR13C6PQ8NH95 151 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 DUX5Q96PT3 197 aa4.5□□□□□ -1.69
CHD2-202ENST00000420239 MUC4Q99102 2169 aa4.49□□□□□ -1.69
CHD2-202ENST00000420239 LYNX1G3V0Z9 82 aa4.49□□□□□ -1.69
CHD2-202ENST00000420239 COX6CP09669 75 aa4.49□□□□□ -1.69
CHD2-202ENST00000420239 IGHV3-30-3P0DP02 117 aa4.49□□□□□ -1.69
CHD2-202ENST00000420239 LYNX1P0DP58 116 aa4.49□□□□□ -1.69
CHD2-202ENST00000420239 RNASE4P34096 147 aaKnown RBP4.49□□□□□ -1.69
CHD2-202ENST00000420239 ZNF256Q9Y2P7 627 aaPredicted RBP4.49□□□□□ -1.69
CHD2-202ENST00000420239 C22orf24Q9Y442 160 aa4.49□□□□□ -1.69
CHD2-202ENST00000420239 IGLV4-3A0A075B6K6 122 aa4.49□□□□□ -1.69
CHD2-202ENST00000420239 TNRC18O15417 2968 aaPredicted RBP4.48□□□□□ -1.69
CHD2-202ENST00000420239 DCHS1Q96JQ0 3298 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 PRSS2P07478 247 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 CXCL5P42830 114 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 Q5XG85 94 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 CLEC19AQ6UXS0 136 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 FAM104AQ969W3 186 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 ZNF318Q5VUA4 2279 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 A8MZ25 164 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 C4orf26Q17RF5 130 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 DPH3Q96FX2 82 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 UPK3BQ9BT76 320 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 TIMM21Q9BVV7 248 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 PEMTQ9UBM1 199 aa4.48□□□□□ -1.69
CHD2-202ENST00000420239 KLLNB2CW77 178 aa4.47□□□□□ -1.69
CHD2-202ENST00000420239 F6UB75 175 aa4.47□□□□□ -1.69
CHD2-202ENST00000420239 ATP6V0E1O15342 81 aa4.47□□□□□ -1.69
CHD2-202ENST00000420239 BEAN1Q3B7T3 259 aa4.47□□□□□ -1.69
CHD2-202ENST00000420239 DSCR8Q96T75 97 aa4.47□□□□□ -1.69
CHD2-202ENST00000420239 NDUFA12Q9UI09 145 aa4.47□□□□□ -1.69
CHD2-202ENST00000420239 SMG1Q96Q15 3661 aaKnown RBP4.47□□□□□ -1.69
CHD2-202ENST00000420239 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.46□□□□□ -1.69
CHD2-202ENST00000420239 F5H768 121 aa4.46□□□□□ -1.69
CHD2-202ENST00000420239 ATOX1O00244 68 aa4.46□□□□□ -1.69
CHD2-202ENST00000420239 TIMM17BO60830 172 aa4.46□□□□□ -1.69
CHD2-202ENST00000420239 DAZ2Q13117 558 aaKnown RBP4.46□□□□□ -1.69
CHD2-202ENST00000420239 ECSCRQ19T08 205 aa4.46□□□□□ -1.69
CHD2-202ENST00000420239 Q6ZSN1 163 aa4.46□□□□□ -1.69
CHD2-202ENST00000420239 DAZ4Q86SG3 579 aaKnown RBP4.46□□□□□ -1.69
CHD2-202ENST00000420239 DAND5Q8N907 189 aa4.46□□□□□ -1.69
CHD2-202ENST00000420239 C20orf203Q8NBC4 194 aa4.46□□□□□ -1.69
CHD2-202ENST00000420239 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms