RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PCP2Q8IVA1 136 aa8.63□□□□□ -1.03
PTCH1-205ENST00000418258 MYO18BQ8IUG5 2567 aa8.63□□□□□ -1.03
PTCH1-205ENST00000418258 SEC61GP60059 68 aa8.63□□□□□ -1.03
PTCH1-205ENST00000418258 HILS1P60008 231 aa8.63□□□□□ -1.03
PTCH1-205ENST00000418258 NTN5Q8WTR8 489 aaPredicted RBP8.63□□□□□ -1.03
PTCH1-205ENST00000418258 TRAV26-1A0A087WT03 109 aa8.62□□□□□ -1.03
PTCH1-205ENST00000418258 TRBV12-3P01733 135 aa8.62□□□□□ -1.03
PTCH1-205ENST00000418258 H0YGX0 51 aa8.62□□□□□ -1.03
PTCH1-205ENST00000418258 MAJINQ3KP22 176 aa8.62□□□□□ -1.03
PTCH1-205ENST00000418258 LINC01545Q5VT33 79 aa8.62□□□□□ -1.03
PTCH1-205ENST00000418258 DIRC1Q969H9 104 aa8.62□□□□□ -1.03
PTCH1-205ENST00000418258 PRORYQ9H606 182 aa8.62□□□□□ -1.03
PTCH1-205ENST00000418258 IGKV1-17P01599 117 aa8.62□□□□□ -1.03
PTCH1-205ENST00000418258 CXCL5P42830 114 aa8.62□□□□□ -1.03
PTCH1-205ENST00000418258 PRO0255Q9UI72 69 aa8.62□□□□□ -1.03
PTCH1-205ENST00000418258 MUSTN1Q8IVN3 82 aa8.61□□□□□ -1.03
PTCH1-205ENST00000418258 ZNF747Q9BV97 191 aa8.61□□□□□ -1.03
PTCH1-205ENST00000418258 DEFB1P60022 68 aa8.61□□□□□ -1.03
PTCH1-205ENST00000418258 A0A0J9YXV3 536 aa8.61□□□□□ -1.03
PTCH1-205ENST00000418258 Q8N7P7 452 aa8.61□□□□□ -1.03
PTCH1-205ENST00000418258 FGF23Q9GZV9 251 aaPredicted RBP8.61□□□□□ -1.03
PTCH1-205ENST00000418258 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
PTCH1-205ENST00000418258 CRYGDP07320 174 aa8.6□□□□□ -1.03
PTCH1-205ENST00000418258 TMEM89A2RUT3 159 aa8.6□□□□□ -1.03
PTCH1-205ENST00000418258 TMEM61Q8N0U2 210 aa8.6□□□□□ -1.03
PTCH1-205ENST00000418258 MSRB1Q9NZV6 116 aa8.6□□□□□ -1.03
PTCH1-205ENST00000418258 PRAC2D3DTV9 90 aa8.6□□□□□ -1.03
PTCH1-205ENST00000418258 NAV3Q8IVL0 2385 aa8.6□□□□□ -1.03
PTCH1-205ENST00000418258 CACNA1AO00555 2505 aa8.6□□□□□ -1.03
PTCH1-205ENST00000418258 WI2-2373I1.2A0A1W2PRP0 233 aa8.6□□□□□ -1.03
PTCH1-205ENST00000418258 CCL25O15444 150 aa8.6□□□□□ -1.03
PTCH1-205ENST00000418258 MAP6D1Q9H9H5 199 aa8.6□□□□□ -1.03
PTCH1-205ENST00000418258 GAGE12HA6NDE8 117 aa8.6□□□□□ -1.03
PTCH1-205ENST00000418258 LOXL1Q08397 574 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-205ENST00000418258 UNQ9165/PRO28630Q6UXU0 137 aa8.59□□□□□ -1.03
PTCH1-205ENST00000418258 Q6ZVH6 145 aa8.59□□□□□ -1.03
PTCH1-205ENST00000418258 IGKV4-1P06312 121 aa8.59□□□□□ -1.03
PTCH1-205ENST00000418258 SRCAPQ6ZRS2 3230 aa8.59□□□□□ -1.03
PTCH1-205ENST00000418258 IGKV3D-7A0A0C4DH55 119 aa8.59□□□□□ -1.03
PTCH1-205ENST00000418258 IGHV4-31P0DP07 118 aa8.59□□□□□ -1.04
PTCH1-205ENST00000418258 DEFB131BA0A096LNP1 70 aa8.58□□□□□ -1.04
PTCH1-205ENST00000418258 TEX22C9J3V5 150 aa8.58□□□□□ -1.04
PTCH1-205ENST00000418258 A4D1N5 150 aa8.58□□□□□ -1.04
PTCH1-205ENST00000418258 IL15RAQ13261 267 aa8.58□□□□□ -1.04
PTCH1-205ENST00000418258 LINC00269Q8N2A0 174 aa8.58□□□□□ -1.04
PTCH1-205ENST00000418258 FAM110AQ9BQ89 295 aa8.58□□□□□ -1.04
PTCH1-205ENST00000418258 COL5A1P20908 1838 aaPredicted RBP8.58□□□□□ -1.04
PTCH1-205ENST00000418258 NDUFS6O75380 124 aaKnown RBP8.58□□□□□ -1.04
PTCH1-205ENST00000418258 Q8NA96 180 aa8.58□□□□□ -1.04
PTCH1-205ENST00000418258 SPATA25Q9BR10 227 aa8.58□□□□□ -1.04
PTCH1-205ENST00000418258 SIRPDQ9H106 197 aa8.58□□□□□ -1.04
PTCH1-205ENST00000418258 DOPEY1Q5JWR5 2465 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 A0A087WZ39 114 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 KRTAP27-1Q3LI81 207 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 WDR87Q6ZQQ6 2873 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 CPAMD8Q8IZJ3 1885 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 ACYP1P07311 99 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 MIR7-3HGQ8N6C7 128 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 TOMM6Q96B49 74 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 A6NDX4 124 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 TMEM256-PLSCR3K7ERE1 68 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 CITED1Q99966 193 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 ADAMTS20P59510 1910 aa8.57□□□□□ -1.04
PTCH1-205ENST00000418258 PSMB8P28062 276 aa8.56□□□□□ -1.04
PTCH1-205ENST00000418258 HIGD2AQ9BW72 106 aa8.56□□□□□ -1.04
PTCH1-205ENST00000418258 A0A1W2PNU3 283 aaPredicted RBP8.56□□□□□ -1.04
PTCH1-205ENST00000418258 ZNF843Q8N446 348 aa8.56□□□□□ -1.04
PTCH1-205ENST00000418258 TRBV6-1A0A0K0K1D8 114 aa8.55□□□□□ -1.04
PTCH1-205ENST00000418258 E7EUB6 86 aa8.55□□□□□ -1.04
PTCH1-205ENST00000418258 LECT2O14960 151 aa8.55□□□□□ -1.04
PTCH1-205ENST00000418258 FAM222AQ5U5X8 452 aa8.55□□□□□ -1.04
PTCH1-205ENST00000418258 A0A0B4J2C4 111 aa8.55□□□□□ -1.04
PTCH1-205ENST00000418258 FBXL19-AS1Q494R0 122 aa8.55□□□□□ -1.04
PTCH1-205ENST00000418258 A0A0J9YX75 114 aa8.55□□□□□ -1.04
PTCH1-205ENST00000418258 CASC2Q6XLA1 102 aa8.55□□□□□ -1.04
PTCH1-205ENST00000418258 LRRC75A-AS1Q8N1F1 130 aa8.55□□□□□ -1.04
PTCH1-205ENST00000418258 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.55□□□□□ -1.04
PTCH1-205ENST00000418258 LGALS9O00182 355 aa8.55□□□□□ -1.04
PTCH1-205ENST00000418258 KIR2DL5BQ8NHK3 375 aa8.55□□□□□ -1.04
PTCH1-205ENST00000418258 PATE2Q6UY27 113 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 TNFRSF13BO14836 293 aaPredicted RBP8.54□□□□□ -1.04
PTCH1-205ENST00000418258 A0A096LNI7 61 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 COX7BP24311 80 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 C10orf91Q5T1B1 145 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 P0DMU3 169 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 FAM231AP0DMU4 169 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 FAM231CP0DMU5 169 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 REG3AQ06141 175 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 Q6YL49 198 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 C19orf84I3L1E1 186 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 IGLV1-47P01700 117 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 ODF3L1Q8IXM7 274 aa8.54□□□□□ -1.04
PTCH1-205ENST00000418258 LINC01620Q4KN68 170 aa8.53□□□□□ -1.04
PTCH1-205ENST00000418258 SHISA2Q6UWI4 295 aa8.53□□□□□ -1.04
PTCH1-205ENST00000418258 NPSP0C0P6 89 aa8.53□□□□□ -1.04
PTCH1-205ENST00000418258 JMJD7-PLA2G4BH0Y9G9 81 aa8.53□□□□□ -1.04
PTCH1-205ENST00000418258 MED14OSP0DP75 135 aa8.53□□□□□ -1.04
PTCH1-205ENST00000418258 C7orf33Q8WU49 177 aa8.53□□□□□ -1.04
PTCH1-205ENST00000418258 LYPD6BQ8NI32 183 aa8.53□□□□□ -1.04
PTCH1-205ENST00000418258 LYRM9A8MSI8 78 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms