RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 PGPEP1Q9NXJ5 209 aa9.91□□□□□ -0.82
LIMS4-201ENST00000413601 URGCP-MRPS24S4R325 110 aa9.91□□□□□ -0.82
LIMS4-201ENST00000413601 TRGC1P0CF51 173 aa9.9□□□□□ -0.82
LIMS4-201ENST00000413601 CTRLP40313 264 aa9.9□□□□□ -0.82
LIMS4-201ENST00000413601 SMIM7Q9BQ49 75 aa9.9□□□□□ -0.82
LIMS4-201ENST00000413601 TRBV6-8A0A0A6YYG3 113 aa9.89□□□□□ -0.83
LIMS4-201ENST00000413601 LRCOL1A6NCL2 159 aa9.89□□□□□ -0.83
LIMS4-201ENST00000413601 M0QY20 66 aa9.89□□□□□ -0.83
LIMS4-201ENST00000413601 GATCO43716 136 aaKnown RBP9.89□□□□□ -0.83
LIMS4-201ENST00000413601 CDK2AP2O75956 126 aa9.89□□□□□ -0.83
LIMS4-201ENST00000413601 SRP19P09132 144 aaKnown RBP9.89□□□□□ -0.83
LIMS4-201ENST00000413601 TWIST1Q15672 202 aa9.89□□□□□ -0.83
LIMS4-201ENST00000413601 SUMO4Q6EEV6 95 aa9.89□□□□□ -0.83
LIMS4-201ENST00000413601 WDR73Q6P4I2 378 aa9.89□□□□□ -0.83
LIMS4-201ENST00000413601 A0A087WX48 190 aa9.88□□□□□ -0.83
LIMS4-201ENST00000413601 TRAV8-3A0A0A6YYJ7 113 aa9.88□□□□□ -0.83
LIMS4-201ENST00000413601 ZNF727A8MUV8 499 aa9.88□□□□□ -0.83
LIMS4-201ENST00000413601 NDUFS6O75380 124 aaKnown RBP9.88□□□□□ -0.83
LIMS4-201ENST00000413601 TEX261Q6UWH6 196 aa9.88□□□□□ -0.83
LIMS4-201ENST00000413601 FAM231DQ6ZW35 169 aa9.88□□□□□ -0.83
LIMS4-201ENST00000413601 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.88□□□□□ -0.83
LIMS4-201ENST00000413601 GTSF1Q8WW33 167 aa9.88□□□□□ -0.83
LIMS4-201ENST00000413601 CNFNQ9BYD5 112 aa9.88□□□□□ -0.83
LIMS4-201ENST00000413601 DPH3P1Q9H4G8 78 aa9.88□□□□□ -0.83
LIMS4-201ENST00000413601 KLK12Q9UKR0 248 aa9.88□□□□□ -0.83
LIMS4-201ENST00000413601 TMEM262E9PQX1 116 aa9.87□□□□□ -0.83
LIMS4-201ENST00000413601 H7C1H1 209 aa9.87□□□□□ -0.83
LIMS4-201ENST00000413601 CDPF1Q6NVV7 123 aa9.87□□□□□ -0.83
LIMS4-201ENST00000413601 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
LIMS4-201ENST00000413601 DNAJC30Q96LL9 226 aa9.87□□□□□ -0.83
LIMS4-201ENST00000413601 TM2D2Q9BX73 214 aa9.87□□□□□ -0.83
LIMS4-201ENST00000413601 A8MWL6 223 aa9.86□□□□□ -0.83
LIMS4-201ENST00000413601 KCNIP4Q6PIL6 250 aa9.86□□□□□ -0.83
LIMS4-201ENST00000413601 LINC01551Q86U37 167 aa9.86□□□□□ -0.83
LIMS4-201ENST00000413601 CHCHD7Q9BUK0 85 aa9.86□□□□□ -0.83
LIMS4-201ENST00000413601 RASL11AQ6T310 242 aa9.85□□□□□ -0.83
LIMS4-201ENST00000413601 UBE2WQ96B02 151 aa9.85□□□□□ -0.83
LIMS4-201ENST00000413601 PGLYRP4Q96LB8 373 aa9.85□□□□□ -0.83
LIMS4-201ENST00000413601 CHCHD5Q9BSY4 110 aa9.85□□□□□ -0.83
LIMS4-201ENST00000413601 ELOBQ15370 118 aa9.84□□□□□ -0.83
LIMS4-201ENST00000413601 MPV17L2Q567V2 206 aa9.84□□□□□ -0.83
LIMS4-201ENST00000413601 TMEM97Q5BJF2 176 aa9.84□□□□□ -0.83
LIMS4-201ENST00000413601 MAPKAPK5-AS1Q8N8E1 139 aa9.84□□□□□ -0.83
LIMS4-201ENST00000413601 KRTAP17-1Q9BYP8 105 aa9.84□□□□□ -0.83
LIMS4-201ENST00000413601 NIT2Q9NQR4 276 aa9.84□□□□□ -0.83
LIMS4-201ENST00000413601 C9JQL5 133 aa9.83□□□□□ -0.84
LIMS4-201ENST00000413601 FOXA3P55318 350 aaPredicted RBP9.83□□□□□ -0.84
LIMS4-201ENST00000413601 SRSF3P84103 164 aaKnown RBP9.83□□□□□ -0.84
LIMS4-201ENST00000413601 WFDC2Q14508 124 aa9.83□□□□□ -0.84
LIMS4-201ENST00000413601 CT83Q5H943 113 aa9.83□□□□□ -0.84
LIMS4-201ENST00000413601 Q8N814 137 aa9.83□□□□□ -0.84
LIMS4-201ENST00000413601 C15orf54Q8N8G6 183 aa9.83□□□□□ -0.84
LIMS4-201ENST00000413601 RYR1P21817 5038 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 TRBV25-1A0A075B6N4 114 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 IGKV2D-24A0A075B6R9 120 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 TRAV26-2A0A0B4J265 109 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 LECT2O14960 151 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 KRTAP10-1P60331 282 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 GAGE6Q13070 117 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 TMEM241Q24JQ0 296 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 ATRAIDQ6UW56 229 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 Q8N976 141 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 GATD1Q8NB37 220 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 DEFB104AQ8WTQ1 72 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 RMI2Q96E14 147 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 OSTCQ9NRP0 149 aa9.82□□□□□ -0.84
LIMS4-201ENST00000413601 LRP1BQ9NZR2 4599 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 IGLV5-52A0A0A0MRZ9 124 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 IGHV1-24A0A0C4DH33 117 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 ANGP03950 147 aaKnown RBP9.81□□□□□ -0.84
LIMS4-201ENST00000413601 GCSHP23434 173 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 IQCJQ1A5X6 159 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 FAM74A3Q4VXF1 159 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 ENHOQ6UWT2 76 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 SMIM15Q7Z3B0 74 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 TSKUQ8WUA8 353 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 BAALCQ8WXS3 180 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 KRTAP4-5Q9BYR2 181 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 COX11Q9Y6N1 276 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 DNAH5Q8TE73 4624 aa9.81□□□□□ -0.84
LIMS4-201ENST00000413601 PKIAP61925 76 aa9.8□□□□□ -0.84
LIMS4-201ENST00000413601 Q0VG73 95 aa9.8□□□□□ -0.84
LIMS4-201ENST00000413601 PEA15Q15121 130 aa9.8□□□□□ -0.84
LIMS4-201ENST00000413601 NTN5Q8WTR8 489 aaPredicted RBP9.8□□□□□ -0.84
LIMS4-201ENST00000413601 ISOC2Q96AB3 205 aa9.8□□□□□ -0.84
LIMS4-201ENST00000413601 BORCS7Q96B45 105 aa9.8□□□□□ -0.84
LIMS4-201ENST00000413601 GFRA4Q9GZZ7 299 aa9.8□□□□□ -0.84
LIMS4-201ENST00000413601 HIGD1CA8MV81 97 aa9.79□□□□□ -0.84
LIMS4-201ENST00000413601 CRPP02741 224 aa9.79□□□□□ -0.84
LIMS4-201ENST00000413601 RPL23P62829 140 aaKnown RBP9.79□□□□□ -0.84
LIMS4-201ENST00000413601 RBX1P62877 108 aa9.79□□□□□ -0.84
LIMS4-201ENST00000413601 LCE2AQ5TA79 106 aaPredicted RBP9.79□□□□□ -0.84
LIMS4-201ENST00000413601 RPL39LQ96EH5 51 aaKnown RBP9.79□□□□□ -0.84
LIMS4-201ENST00000413601 V9GYV3 84 aa9.79□□□□□ -0.84
LIMS4-201ENST00000413601 A0A1B0GUT8 65 aa9.78□□□□□ -0.84
LIMS4-201ENST00000413601 ADIRFQ15847 76 aa9.78□□□□□ -0.84
LIMS4-201ENST00000413601 FRZBQ92765 325 aa9.78□□□□□ -0.84
LIMS4-201ENST00000413601 TMEM243Q9BU79 118 aa9.78□□□□□ -0.84
LIMS4-201ENST00000413601 NAT8Q9UHE5 227 aa9.78□□□□□ -0.84
LIMS4-201ENST00000413601 FAM231BA6NCW3 169 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms