RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TRBV10-3A0A0K0K1G6 114 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 TMEM262E9PQX1 116 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 INE1O15225 51 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 HCRTO43612 131 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 IGHV3-30P01768 117 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 IGHV3-30-5P0DP03 117 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 PDE6GP18545 87 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 GNGT1P63211 74 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 DEFB103AP81534 67 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 LINC00322Q6ZN03 302 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-204ENST00000412061 SNURFQ9Y675 71 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 DOCK1Q14185 1865 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 EFCAB6Q5THR3 1501 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 KIAA0586Q9BVV6 1533 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 ZGRF1Q86YA3 2104 aa2.07□□□□□ -2.08
BRCA1-204ENST00000412061 MYH8P13535 1937 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 IQSEC2Q5JU85 1478 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 IFT140Q96RY7 1462 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 CDK12Q9NYV4 1490 aaPredicted RBP2.06□□□□□ -2.08
BRCA1-204ENST00000412061 NRXN1Q9ULB1 1477 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 SHANK2Q9UPX8 1470 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 CDK13Q14004 1512 aaKnown RBP2.06□□□□□ -2.08
BRCA1-204ENST00000412061 IGLV3-32A0A0A0MS00 114 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 TRAV12-3A0A0B4J271 114 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 UBE2L5PA0A1B0GUS4 154 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 UBE2L3P68036 154 aaKnown RBP2.06□□□□□ -2.08
BRCA1-204ENST00000412061 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 NDUFA11Q86Y39 141 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 SBSPONQ8IVN8 264 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 ARAP2Q8WZ64 1704 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 ABCA3Q99758 1704 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 NWD2Q9ULI1 1742 aa2.06□□□□□ -2.08
BRCA1-204ENST00000412061 FANCAO15360 1455 aa2.05□□□□□ -2.08
BRCA1-204ENST00000412061 LMTK2Q8IWU2 1503 aa2.05□□□□□ -2.08
BRCA1-204ENST00000412061 PATJQ8NI35 1801 aa2.05□□□□□ -2.08
BRCA1-204ENST00000412061 RBAKDNA6NC62 111 aa2.05□□□□□ -2.08
BRCA1-204ENST00000412061 M0R2N4 97 aa2.05□□□□□ -2.08
BRCA1-204ENST00000412061 CCKP06307 115 aa2.05□□□□□ -2.08
BRCA1-204ENST00000412061 IL9P15248 144 aa2.05□□□□□ -2.08
BRCA1-204ENST00000412061 ATP5EP56381 51 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-204ENST00000412061 DPH3P1Q9H4G8 78 aa2.05□□□□□ -2.08
BRCA1-204ENST00000412061 MED9Q9NWA0 146 aa2.05□□□□□ -2.08
BRCA1-204ENST00000412061 DNMBPQ6XZF7 1577 aa2.05□□□□□ -2.08
BRCA1-204ENST00000412061 ZNF142P52746 1687 aaPredicted RBP2.04□□□□□ -2.08
BRCA1-204ENST00000412061 ABCC3O15438 1527 aa2.04□□□□□ -2.08
BRCA1-204ENST00000412061 ARHGAP5Q13017 1502 aa2.04□□□□□ -2.08
BRCA1-204ENST00000412061 LOC110117498A0A087WWA1 95 aa2.04□□□□□ -2.08
BRCA1-204ENST00000412061 TRAV13-2A0A0B4J235 113 aa2.04□□□□□ -2.08
BRCA1-204ENST00000412061 PVALEFA0A1B0GWK0 134 aa2.04□□□□□ -2.08
BRCA1-204ENST00000412061 SNCAP37840 140 aa2.04□□□□□ -2.08
BRCA1-204ENST00000412061 RPL37AP61513 92 aaKnown RBP2.04□□□□□ -2.08
BRCA1-204ENST00000412061 DCDP81605 110 aaKnown RBP2.04□□□□□ -2.08
BRCA1-204ENST00000412061 COMMD6Q7Z4G1 85 aa2.04□□□□□ -2.08
BRCA1-204ENST00000412061 EIF2AK4Q9P2K8 1649 aaKnown RBP2.04□□□□□ -2.08
BRCA1-204ENST00000412061 MAGI3Q5TCQ9 1506 aa2.04□□□□□ -2.08
BRCA1-204ENST00000412061 ADGRB2O60241 1585 aa2.03□□□□□ -2.08
BRCA1-204ENST00000412061 VWDEQ8N2E2 1590 aa2.03□□□□□ -2.08
BRCA1-204ENST00000412061 SNRNP200O75643 2136 aaKnown RBP2.03□□□□□ -2.08
BRCA1-204ENST00000412061 C10orf71Q711Q0 1435 aa2.03□□□□□ -2.08
BRCA1-204ENST00000412061 ANKARQ7Z5J8 1434 aa2.03□□□□□ -2.08
BRCA1-204ENST00000412061 SSSCA1O60232 199 aa2.03□□□□□ -2.08
BRCA1-204ENST00000412061 UBA52P62987 128 aaKnown RBP2.03□□□□□ -2.08
BRCA1-204ENST00000412061 SPATA45Q537H7 98 aa2.03□□□□□ -2.08
BRCA1-204ENST00000412061 PHIPQ8WWQ0 1821 aa2.03□□□□□ -2.08
BRCA1-204ENST00000412061 TNS1Q9HBL0 1735 aaKnown RBP2.03□□□□□ -2.08
BRCA1-204ENST00000412061 ESPL1Q14674 2120 aa2.03□□□□□ -2.09
BRCA1-204ENST00000412061 DLEC1Q9Y238 1755 aa2.03□□□□□ -2.09
BRCA1-204ENST00000412061 KIAA0100Q14667 2235 aaKnown RBP2.02□□□□□ -2.09
BRCA1-204ENST00000412061 PHRF1Q9P1Y6 1649 aaKnown RBP2.02□□□□□ -2.09
BRCA1-204ENST00000412061 TRBV6-7A0A0A0MS04 114 aa2.02□□□□□ -2.09
BRCA1-204ENST00000412061 SMIM31A0A1B0GVY4 71 aa2.02□□□□□ -2.09
BRCA1-204ENST00000412061 HIGD1CA8MV81 97 aa2.02□□□□□ -2.09
BRCA1-204ENST00000412061 HCG22E2RYF7 251 aa2.02□□□□□ -2.09
BRCA1-204ENST00000412061 CYP2G1PQ6ZSU1 146 aa2.02□□□□□ -2.09
BRCA1-204ENST00000412061 Q9H521 79 aa2.02□□□□□ -2.09
BRCA1-204ENST00000412061 FAIMQ9NVQ4 179 aa2.02□□□□□ -2.09
BRCA1-204ENST00000412061 AP4S1Q9Y587 144 aa2.02□□□□□ -2.09
BRCA1-204ENST00000412061 CDC42BPAQ5VT25 1732 aa2.02□□□□□ -2.09
BRCA1-204ENST00000412061 URB2Q14146 1524 aaKnown RBP2.02□□□□□ -2.09
BRCA1-204ENST00000412061 BAHCC1Q9P281 2608 aa2.01□□□□□ -2.09
BRCA1-204ENST00000412061 ITSN2Q9NZM3 1697 aa2.01□□□□□ -2.09
BRCA1-204ENST00000412061 TCHHQ07283 1943 aa2.01□□□□□ -2.09
BRCA1-204ENST00000412061 ERVK-7P63135 1459 aa2.01□□□□□ -2.09
BRCA1-204ENST00000412061 CCL8P80075 99 aa2.01□□□□□ -2.09
BRCA1-204ENST00000412061 GDF5OSQ5U4N7 250 aa2.01□□□□□ -2.09
BRCA1-204ENST00000412061 ZNF563Q8TA94 476 aa2.01□□□□□ -2.09
BRCA1-204ENST00000412061 DPY30Q9C005 99 aa2.01□□□□□ -2.09
BRCA1-204ENST00000412061 IQGAP2Q13576 1575 aa2.01□□□□□ -2.09
BRCA1-204ENST00000412061 SHPRHQ149N8 1683 aa2.01□□□□□ -2.09
BRCA1-204ENST00000412061 PPRC1Q5VV67 1664 aaKnown RBP2.01□□□□□ -2.09
BRCA1-204ENST00000412061 RREB1Q92766 1687 aa2.01□□□□□ -2.09
BRCA1-204ENST00000412061 TROQ12816 1431 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-204ENST00000412061 TET1Q8NFU7 2136 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 LOC101927531A0A1B0GV80 90 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 MT-ATP8P03928 68 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 PCOTHQ58A44 107 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 C4orf33Q8N1A6 199 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 OBSCN-AS1Q96MR7 158 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 AMELYQ99218 206 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 USP32Q8NFA0 1604 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 192.4 ms