RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TP73-AS1Q9UF72 201 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 AHCTF1Q8WYP5 2266 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 CHCHD10Q8WYQ3 142 aaPredicted RBP3.48□□□□□ -1.85
PTPN13-202ENST00000411767 NHLRC4P0CG21 123 aaPredicted RBP3.48□□□□□ -1.85
PTPN13-202ENST00000411767 MYCNOSP40205 109 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 Q6ZS92 163 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 PRR31Q5SQ13 230 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 LYPD5Q6UWN5 251 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 WFDC5Q8TCV5 224 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 UNC13CQ8NB66 2214 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 C1orf134Q5TEV5 83 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 C5orf67F2Z3F1 127 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 FRMD6-AS1P0C7T7 363 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 C1orf137Q5JT78 98 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 LTBP4Q8N2S1 1624 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 BCE1O60756 84 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 PSORS1C2Q9UIG4 136 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 E7EQL1 145 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 ADORA2A-AS1P86434 159 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 RSPO4Q2I0M5 234 aaPredicted RBP3.47□□□□□ -1.85
PTPN13-202ENST00000411767 RALGAPA1Q6GYQ0 2036 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 CABIN1Q9Y6J0 2220 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 CACNA1DQ01668 2161 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 ARFGEF3Q5TH69 2177 aa3.47□□□□□ -1.85
PTPN13-202ENST00000411767 C10orf55Q5SWW7 151 aa3.46□□□□□ -1.85
PTPN13-202ENST00000411767 Q96MF0 132 aa3.46□□□□□ -1.85
PTPN13-202ENST00000411767 A0A087WVE0 104 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 IGKV1D-43A0A0B4J1Z2 117 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 REG3GQ6UW15 175 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 SCN10AQ9Y5Y9 1956 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 HEATR5AQ86XA9 2040 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 LY6G6EA0A0G2JKS1 128 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 E7EUB6 86 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 TNFRSF13BO14836 293 aaPredicted RBP3.46□□□□□ -1.86
PTPN13-202ENST00000411767 SAP25Q8TEE9 199 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 CISD3P0C7P0 127 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 NAV1Q8NEY1 1877 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 KIAA1551Q9HCM1 1747 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 ZNF883P0CG24 379 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 SHISA2Q6UWI4 295 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 TMEM92Q6UXU6 159 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 MTCL1Q9Y4B5 1905 aaKnown RBP3.46□□□□□ -1.86
PTPN13-202ENST00000411767 HRKO00198 91 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 CSRP2Q16527 193 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 Q6ZSR3 168 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 PLAC4Q8WY50 150 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 PLA2G2EQ9NZK7 142 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 INTS1Q8N201 2190 aaKnown RBP3.46□□□□□ -1.86
PTPN13-202ENST00000411767 TRBV6-8A0A0A6YYG3 113 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 RNF223E7ERA6 249 aa3.46□□□□□ -1.86
PTPN13-202ENST00000411767 CRIP2P52943 208 aaPredicted RBP3.46□□□□□ -1.86
PTPN13-202ENST00000411767 TSHBP01222 138 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 ARID1AO14497 2285 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 TAF1LQ8IZX4 1826 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 COL24A1Q17RW2 1714 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 RPS28P62857 69 aaKnown RBP3.45□□□□□ -1.86
PTPN13-202ENST00000411767 NTM-AS1Q6ZSK4 140 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 RPL39LQ96EH5 51 aaKnown RBP3.45□□□□□ -1.86
PTPN13-202ENST00000411767 MDC1Q14676 2089 aaKnown RBP3.45□□□□□ -1.86
PTPN13-202ENST00000411767 CKAP5Q14008 2032 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 Q0VFX4 171 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 PIN1P1O15428 100 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 C2orf48Q96LS8 159 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 LINC01600Q96MT4 127 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 SBF2Q86WG5 1849 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 SCN7AQ01118 1682 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 CSRP1P21291 193 aaKnown RBP3.45□□□□□ -1.86
PTPN13-202ENST00000411767 IGF2-ASQ6U949 168 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 ZNF833PQ6ZTB9 187 aa3.45□□□□□ -1.86
PTPN13-202ENST00000411767 LY6HO94772 140 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 DEFB113Q30KQ7 82 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 C20orf203Q8NBC4 194 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 TIAM2Q8IVF5 1701 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 ECM29Q5VYK3 1845 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 DOCK11Q5JSL3 2073 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 ARHGEF17Q96PE2 2063 aaPredicted RBP3.44□□□□□ -1.86
PTPN13-202ENST00000411767 C4AP0C0L4 1744 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 C4BP0C0L5 1744 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 ZFC3H1O60293 1989 aaKnown RBP3.44□□□□□ -1.86
PTPN13-202ENST00000411767 IGKV2-28A0A075B6P5 120 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 C15orf65H3BRN8 121 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 LY75O60449 1722 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 IGKV2D-28P01615 120 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 LINC00473A8K010 186 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 MRPS12O15235 138 aaKnown RBP3.44□□□□□ -1.86
PTPN13-202ENST00000411767 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 C9orf106Q8NAJ2 232 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 APC2O95996 2303 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 DEFB131BA0A096LNP1 70 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 DLEC1Q9Y238 1755 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 IGLV5-45A0A087WSX0 123 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 C9orf129Q5T035 196 aaKnown RBP3.44□□□□□ -1.86
PTPN13-202ENST00000411767 COX6B2Q6YFQ2 88 aa3.44□□□□□ -1.86
PTPN13-202ENST00000411767 NCOR1O75376 2440 aa3.43□□□□□ -1.86
PTPN13-202ENST00000411767 Q8N3U1 123 aa3.43□□□□□ -1.86
PTPN13-202ENST00000411767 TRPM6Q9BX84 2022 aa3.43□□□□□ -1.86
PTPN13-202ENST00000411767 RPL37AP8A6NKH3 93 aa3.43□□□□□ -1.86
PTPN13-202ENST00000411767 LINC01590Q5TEZ4 76 aa3.43□□□□□ -1.86
PTPN13-202ENST00000411767 ARHGAP32A7KAX9 2087 aa3.43□□□□□ -1.86
PTPN13-202ENST00000411767 NHSQ6T4R5 1651 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms