RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 A0A0J9YXV3 536 aa10.01□□□□□ -0.81
COL6A3-206ENST00000409809 Q6ZSR3 168 aa10.01□□□□□ -0.81
COL6A3-206ENST00000409809 ODF3Q96PU9 254 aa10.01□□□□□ -0.81
COL6A3-206ENST00000409809 XCL2Q9UBD3 114 aa10.01□□□□□ -0.81
COL6A3-206ENST00000409809 U3KQK5 164 aa10.01□□□□□ -0.81
COL6A3-206ENST00000409809 GNLYP22749 145 aa10□□□□□ -0.81
COL6A3-206ENST00000409809 PIK3CD-AS1Q5SR53 167 aa10□□□□□ -0.81
COL6A3-206ENST00000409809 HIVEP2P31629 2446 aa10□□□□□ -0.81
COL6A3-206ENST00000409809 NEXN-AS1Q8NBZ9 246 aa10□□□□□ -0.81
COL6A3-206ENST00000409809 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10□□□□□ -0.81
COL6A3-206ENST00000409809 IGKV2-29A2NJV5 120 aaPredicted RBP10□□□□□ -0.81
COL6A3-206ENST00000409809 CAMK2N2Q96S95 79 aa10□□□□□ -0.81
COL6A3-206ENST00000409809 ZNF581Q9P0T4 197 aa10□□□□□ -0.81
COL6A3-206ENST00000409809 K7ENP7 123 aa10□□□□□ -0.81
COL6A3-206ENST00000409809 TFF1P04155 84 aa10□□□□□ -0.81
COL6A3-206ENST00000409809 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
COL6A3-206ENST00000409809 IBA57-AS1B1ANH7 110 aa10□□□□□ -0.81
COL6A3-206ENST00000409809 CCDC179H3BU77 68 aa10□□□□□ -0.81
COL6A3-206ENST00000409809 C3orf56Q8N813 242 aa9.99□□□□□ -0.81
COL6A3-206ENST00000409809 C20orf203Q8NBC4 194 aa9.99□□□□□ -0.81
COL6A3-206ENST00000409809 IGHV3-16A0A0C4DH30 117 aa9.99□□□□□ -0.81
COL6A3-206ENST00000409809 LST1O00453 97 aa9.99□□□□□ -0.81
COL6A3-206ENST00000409809 LINC00694P0DN24 101 aa9.99□□□□□ -0.81
COL6A3-206ENST00000409809 RNF144BQ7Z419 303 aa9.99□□□□□ -0.81
COL6A3-206ENST00000409809 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
COL6A3-206ENST00000409809 NRGNQ92686 78 aa9.99□□□□□ -0.81
COL6A3-206ENST00000409809 TIRAPP58753 221 aa9.98□□□□□ -0.81
COL6A3-206ENST00000409809 PRORYQ9H606 182 aa9.98□□□□□ -0.81
COL6A3-206ENST00000409809 THSD7BQ9C0I4 1608 aa9.98□□□□□ -0.81
COL6A3-206ENST00000409809 IGKV4-1P06312 121 aa9.98□□□□□ -0.81
COL6A3-206ENST00000409809 IGHV3-33P01772 117 aa9.98□□□□□ -0.81
COL6A3-206ENST00000409809 RPS28P62857 69 aaKnown RBP9.98□□□□□ -0.81
COL6A3-206ENST00000409809 A0A0J9YX75 114 aa9.98□□□□□ -0.81
COL6A3-206ENST00000409809 DEFB104AQ8WTQ1 72 aa9.98□□□□□ -0.81
COL6A3-206ENST00000409809 DEFB105AQ8NG35 78 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 ZNF524Q96C55 264 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 ABCA2Q9BZC7 2435 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 IGLV3-9A0A075B6K5 115 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 IGHV3-38A0A0C4DH36 116 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 IGLV1-44P01699 117 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 TRIAP1O43715 76 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 UFSP1Q6NVU6 142 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 RETNQ9HD89 108 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 MIR7-3HGQ8N6C7 128 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 MIFP14174 115 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 CASC2Q6XLA1 102 aa9.97□□□□□ -0.81
COL6A3-206ENST00000409809 C11orf1Q9H5F2 150 aa9.96□□□□□ -0.81
COL6A3-206ENST00000409809 HIVEP3Q5T1R4 2406 aa9.96□□□□□ -0.81
COL6A3-206ENST00000409809 WFDC11Q8NEX6 87 aa9.96□□□□□ -0.81
COL6A3-206ENST00000409809 I3L2K1 104 aa9.96□□□□□ -0.82
COL6A3-206ENST00000409809 LINC00205P59089 165 aa9.96□□□□□ -0.82
COL6A3-206ENST00000409809 RNASE13Q5GAN3 156 aaKnown RBP9.96□□□□□ -0.82
COL6A3-206ENST00000409809 FAM19A5Q7Z5A7 132 aaPredicted RBP9.96□□□□□ -0.82
COL6A3-206ENST00000409809 ZFYVE26Q68DK2 2539 aa9.95□□□□□ -0.82
COL6A3-206ENST00000409809 LRP4O75096 1905 aa9.95□□□□□ -0.82
COL6A3-206ENST00000409809 LY6DQ14210 128 aa9.95□□□□□ -0.82
COL6A3-206ENST00000409809 IGLV11-55A0A075B6I3 123 aa9.95□□□□□ -0.82
COL6A3-206ENST00000409809 A0A0J9YY99 117 aa9.95□□□□□ -0.82
COL6A3-206ENST00000409809 RAI1Q7Z5J4 1906 aaPredicted RBP9.95□□□□□ -0.82
COL6A3-206ENST00000409809 XGP55808 180 aa9.95□□□□□ -0.82
COL6A3-206ENST00000409809 ASPHD1Q5U4P2 390 aa9.95□□□□□ -0.82
COL6A3-206ENST00000409809 KRTAP27-1Q3LI81 207 aa9.95□□□□□ -0.82
COL6A3-206ENST00000409809 C5orf24Q7Z6I8 188 aa9.95□□□□□ -0.82
COL6A3-206ENST00000409809 ZFHX2Q9C0A1 2572 aaPredicted RBP9.95□□□□□ -0.82
COL6A3-206ENST00000409809 K7EMT4 169 aa9.95□□□□□ -0.82
COL6A3-206ENST00000409809 IGKV1-17P01599 117 aa9.95□□□□□ -0.82
COL6A3-206ENST00000409809 LOXP28300 417 aaPredicted RBP9.95□□□□□ -0.82
COL6A3-206ENST00000409809 IGHV4-28A0A0C4DH34 117 aa9.94□□□□□ -0.82
COL6A3-206ENST00000409809 TMEM89A2RUT3 159 aa9.94□□□□□ -0.82
COL6A3-206ENST00000409809 GNRH2O43555 120 aa9.94□□□□□ -0.82
COL6A3-206ENST00000409809 EPOPA6NHQ4 379 aa9.94□□□□□ -0.82
COL6A3-206ENST00000409809 IGKV2D-26A0A0A0MRZ7 120 aa9.94□□□□□ -0.82
COL6A3-206ENST00000409809 PINLYPA6NC86 204 aa9.94□□□□□ -0.82
COL6A3-206ENST00000409809 MSMBP08118 114 aa9.94□□□□□ -0.82
COL6A3-206ENST00000409809 ATP1A1-AS1Q5TC04 95 aa9.94□□□□□ -0.82
COL6A3-206ENST00000409809 C2orf91Q6ZV80 131 aa9.94□□□□□ -0.82
COL6A3-206ENST00000409809 IGHV3-30P01768 117 aa9.93□□□□□ -0.82
COL6A3-206ENST00000409809 IGHV3-30-5P0DP03 117 aa9.93□□□□□ -0.82
COL6A3-206ENST00000409809 ZNF462Q96JM2 2506 aa9.93□□□□□ -0.82
COL6A3-206ENST00000409809 K7EIM0 57 aa9.93□□□□□ -0.82
COL6A3-206ENST00000409809 LHBP01229 141 aa9.93□□□□□ -0.82
COL6A3-206ENST00000409809 H0Y9J4 135 aa9.93□□□□□ -0.82
COL6A3-206ENST00000409809 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
COL6A3-206ENST00000409809 WDR86Q86TI4 376 aa9.93□□□□□ -0.82
COL6A3-206ENST00000409809 COX17Q14061 63 aa9.93□□□□□ -0.82
COL6A3-206ENST00000409809 DEFB121Q5J5C9 76 aa9.92□□□□□ -0.82
COL6A3-206ENST00000409809 LYPD2Q6UXB3 125 aa9.92□□□□□ -0.82
COL6A3-206ENST00000409809 NFE4Q86UQ8 179 aa9.92□□□□□ -0.82
COL6A3-206ENST00000409809 TMEM223A0PJW6 202 aa9.92□□□□□ -0.82
COL6A3-206ENST00000409809 GATA1P15976 413 aaPredicted RBP9.92□□□□□ -0.82
COL6A3-206ENST00000409809 Q6ZR03 302 aa9.92□□□□□ -0.82
COL6A3-206ENST00000409809 NOP10Q9NPE3 64 aaKnown RBP9.92□□□□□ -0.82
COL6A3-206ENST00000409809 PLA2G2EQ9NZK7 142 aa9.92□□□□□ -0.82
COL6A3-206ENST00000409809 UBE2D2P62837 147 aa9.91□□□□□ -0.82
COL6A3-206ENST00000409809 LINC00308Q8TCZ7 52 aa9.91□□□□□ -0.82
COL6A3-206ENST00000409809 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
COL6A3-206ENST00000409809 A0A0G2JNJ9 132 aa9.91□□□□□ -0.82
COL6A3-206ENST00000409809 Q9UFV3 132 aa9.91□□□□□ -0.82
COL6A3-206ENST00000409809 C5orf38Q86SI9 138 aa9.91□□□□□ -0.82
COL6A3-206ENST00000409809 C14orf177Q52M58 125 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 752.6 ms