RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 GAGE6Q13070 117 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 MRGPRG-AS1Q2M3A8 158 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 PGPEP1Q9NXJ5 209 aa3.57□□□□□ -1.84
PCDH11X-207ENST00000406881 B5MCH6 92 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 AVPP01185 164 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 DEFB1P60022 68 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 RPL32P62910 135 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 DEFB121Q5J5C9 76 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 CEND1Q8N111 149 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 SCRT2Q9NQ03 307 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 MDFICQ9P1T7 246 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 TRBV7-3A0A075B6L6 115 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 SMIM9A6NGZ8 99 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 HILS1P60008 231 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 HERV-K104P63124 156 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 CNFNQ9BYD5 112 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 PTPRBP23467 1997 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 NOTCH3Q9UM47 2321 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 PLXNB1O43157 2135 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 TRAV4A0A0B4J268 109 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 A0A0U1RRA0 63 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 KLLNB2CW77 178 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 F8W735 103 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 SPRY2O43597 315 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 NDUFA7O95182 113 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 ATP5G1P05496 136 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 ODF1Q14990 250 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 ETDBQ3ZM63 59 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 C10orf126Q8N4M7 172 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 C20orf203Q8NBC4 194 aa3.56□□□□□ -1.84
PCDH11X-207ENST00000406881 IFITM1P13164 125 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 MRPL23Q16540 153 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 PIK3CD-AS1Q5SR53 167 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 S100A7L2Q5SY68 101 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 DEFB125Q8N687 156 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 ATP6V0E2Q8NHE4 81 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 PIFOQ8TCI5 191 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 ANKRD11Q6UB99 2663 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 TRBV6-5A0A0K0K1A5 114 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 E9PLD3 99 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 K7EP34 96 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 BAALCQ8WXS3 180 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 CEP295Q9C0D2 2601 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 USP9XQ93008 2570 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 C11orf86A6NJI1 115 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 TSPAN13O95857 204 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 RMI2Q96E14 147 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 PRO1854Q9UHT4 67 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 TP53TG3Q9ULZ0 132 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 IGKV2-29A2NJV5 120 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 PCP2Q8IVA1 136 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 UBE2DNLQ8IWF7 75 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 LINC01006Q8NI28 216 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 DCANP1Q8TF63 244 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 RNF185Q96GF1 192 aa3.55□□□□□ -1.84
PCDH11X-207ENST00000406881 Q6ZS46 218 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 SLC25A29Q8N8R3 303 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 JPT2Q9H910 190 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 ICOSQ9Y6W8 199 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 A0A0J9YXV3 536 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 GYPEP15421 78 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 C12orf74Q32Q52 190 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 C10orf99Q6UWK7 81 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 TANC2Q9HCD6 1990 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 TRAV13-2A0A0B4J235 113 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 A0A1W2PPM0 123 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 FGF6P10767 208 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 KRTAP10-9P60411 292 aa3.54□□□□□ -1.84
PCDH11X-207ENST00000406881 HIVEP3Q5T1R4 2406 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 G3V4G9 280 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 CRLF1O75462 422 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 ZMAT4Q9H898 229 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 PRO0255Q9UI72 69 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 LYRM9A8MSI8 78 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 F8W1H4 67 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 H7C423 109 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 ZNF561-AS1K7EIQ3 104 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 RS1O15537 224 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 LY6G6DO95868 133 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 ANGP03950 147 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 NPC2P61916 151 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 KLK9Q2XQG4 91 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 C2orf82Q6UX34 121 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 C9orf85Q96MD7 179 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 HHLA3Q9XRX5 114 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 RAI1Q7Z5J4 1906 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 WDR87Q6ZQQ6 2873 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 ARHGAP32A7KAX9 2087 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 RNASE3P12724 160 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 RPL39P62891 51 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 C16orf95Q9H693 158 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 C11orf21Q9P2W6 132 aa3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 SETXQ7Z333 2677 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-207ENST00000406881 TRBV27A0A0K0K1C4 114 aa3.52□□□□□ -1.85
PCDH11X-207ENST00000406881 M0QY20 66 aa3.52□□□□□ -1.85
PCDH11X-207ENST00000406881 DPH3Q96FX2 82 aa3.52□□□□□ -1.85
PCDH11X-207ENST00000406881 ZNF625Q96I27 306 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-207ENST00000406881 C11orf68Q9H3H3 251 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-207ENST00000406881 TRAV8-4A0A0B4J246 113 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms