RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 MT-ND4LP03901 98 aa11.33□□□□□ -0.6
CSNK1D-205ENST00000403276 IGHV3-30-3P0DP02 117 aa11.33□□□□□ -0.6
CSNK1D-205ENST00000403276 IGHV3-30-5P0DP03 117 aa11.33□□□□□ -0.6
CSNK1D-205ENST00000403276 LELP1Q5T871 98 aa11.33□□□□□ -0.6
CSNK1D-205ENST00000403276 CLRN3Q8NCR9 226 aa11.33□□□□□ -0.6
CSNK1D-205ENST00000403276 TSKUQ8WUA8 353 aa11.33□□□□□ -0.6
CSNK1D-205ENST00000403276 K7EP13 123 aa11.32□□□□□ -0.6
CSNK1D-205ENST00000403276 LINC00694P0DN24 101 aa11.32□□□□□ -0.6
CSNK1D-205ENST00000403276 FOXA3P55318 350 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-205ENST00000403276 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
CSNK1D-205ENST00000403276 ZFP82Q8N141 532 aa11.32□□□□□ -0.6
CSNK1D-205ENST00000403276 SVBPQ8N300 66 aa11.32□□□□□ -0.6
CSNK1D-205ENST00000403276 TPPP3Q9BW30 176 aa11.32□□□□□ -0.6
CSNK1D-205ENST00000403276 GFRA4Q9GZZ7 299 aa11.32□□□□□ -0.6
CSNK1D-205ENST00000403276 HSPG2P98160 4391 aa11.32□□□□□ -0.6
CSNK1D-205ENST00000403276 MUC21A0A0G2JKD1 596 aa11.31□□□□□ -0.6
CSNK1D-205ENST00000403276 MUC21A0A140T8X8 626 aa11.31□□□□□ -0.6
CSNK1D-205ENST00000403276 FAM231BA6NCW3 169 aa11.31□□□□□ -0.6
CSNK1D-205ENST00000403276 F2Z2F3 143 aa11.31□□□□□ -0.6
CSNK1D-205ENST00000403276 RHODO00212 210 aa11.31□□□□□ -0.6
CSNK1D-205ENST00000403276 CTRLP40313 264 aa11.31□□□□□ -0.6
CSNK1D-205ENST00000403276 LYZL1Q6UWQ5 148 aa11.31□□□□□ -0.6
CSNK1D-205ENST00000403276 C10orf126Q8N4M7 172 aa11.31□□□□□ -0.6
CSNK1D-205ENST00000403276 OR10AG1Q8NH19 301 aa11.31□□□□□ -0.6
CSNK1D-205ENST00000403276 APOBP04114 4563 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-205ENST00000403276 SMIM27A0A1W2PRY6 76 aa11.3□□□□□ -0.6
CSNK1D-205ENST00000403276 C7orf77A4D0Y5 90 aa11.3□□□□□ -0.6
CSNK1D-205ENST00000403276 RHEBQ15382 184 aa11.3□□□□□ -0.6
CSNK1D-205ENST00000403276 Q8N3U1 123 aa11.3□□□□□ -0.6
CSNK1D-205ENST00000403276 CTDSP1Q9GZU7 261 aa11.3□□□□□ -0.6
CSNK1D-205ENST00000403276 A0A087WTM6 91 aa11.29□□□□□ -0.6
CSNK1D-205ENST00000403276 HIGD1CA8MV81 97 aa11.29□□□□□ -0.6
CSNK1D-205ENST00000403276 EREGO14944 169 aa11.29□□□□□ -0.6
CSNK1D-205ENST00000403276 SNAPINO95295 136 aa11.29□□□□□ -0.6
CSNK1D-205ENST00000403276 SSTP61278 116 aa11.29□□□□□ -0.6
CSNK1D-205ENST00000403276 CNFNQ9BYD5 112 aa11.29□□□□□ -0.6
CSNK1D-205ENST00000403276 A0A087WWC5 75 aa11.28□□□□□ -0.6
CSNK1D-205ENST00000403276 IBA57-AS1B1ANH7 110 aa11.28□□□□□ -0.6
CSNK1D-205ENST00000403276 CDK2AP2O75956 126 aa11.28□□□□□ -0.6
CSNK1D-205ENST00000403276 CACNG7P62955 275 aa11.28□□□□□ -0.6
CSNK1D-205ENST00000403276 SPANXN1Q5VSR9 72 aa11.28□□□□□ -0.6
CSNK1D-205ENST00000403276 WDR73Q6P4I2 378 aa11.28□□□□□ -0.6
CSNK1D-205ENST00000403276 NUP35Q8NFH5 326 aa11.28□□□□□ -0.6
CSNK1D-205ENST00000403276 PGLYRP4Q96LB8 373 aa11.28□□□□□ -0.6
CSNK1D-205ENST00000403276 KRTAP4-5Q9BYR2 181 aa11.28□□□□□ -0.6
CSNK1D-205ENST00000403276 Q9HAA7 133 aa11.28□□□□□ -0.6
CSNK1D-205ENST00000403276 NAT8BQ9UHF3 227 aa11.28□□□□□ -0.6
CSNK1D-205ENST00000403276 RPS10P5Q9NQ39 176 aa11.27□□□□□ -0.61
CSNK1D-205ENST00000403276 TMEM242Q9NWH2 141 aa11.27□□□□□ -0.61
CSNK1D-205ENST00000403276 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.61
CSNK1D-205ENST00000403276 PSCAO43653 123 aa11.25□□□□□ -0.61
CSNK1D-205ENST00000403276 NTF3P20783 257 aa11.25□□□□□ -0.61
CSNK1D-205ENST00000403276 BORCS7Q96B45 105 aa11.25□□□□□ -0.61
CSNK1D-205ENST00000403276 IMMP2LQ96T52 175 aa11.25□□□□□ -0.61
CSNK1D-205ENST00000403276 ABCA13Q86UQ4 5058 aa11.25□□□□□ -0.61
CSNK1D-205ENST00000403276 A0A1B0GUT8 65 aa11.24□□□□□ -0.61
CSNK1D-205ENST00000403276 TWIST1Q15672 202 aa11.24□□□□□ -0.61
CSNK1D-205ENST00000403276 ZNF56Q15929 161 aa11.24□□□□□ -0.61
CSNK1D-205ENST00000403276 ATRAIDQ6UW56 229 aa11.24□□□□□ -0.61
CSNK1D-205ENST00000403276 DAZ4Q86SG3 579 aaKnown RBP11.24□□□□□ -0.61
CSNK1D-205ENST00000403276 MAPKAPK5-AS1Q8N8E1 139 aa11.24□□□□□ -0.61
CSNK1D-205ENST00000403276 DAZ3Q9NR90 486 aaKnown RBP11.24□□□□□ -0.61
CSNK1D-205ENST00000403276 RAB4BP61018 213 aa11.23□□□□□ -0.61
CSNK1D-205ENST00000403276 RPL36AP83881 106 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-205ENST00000403276 RPL36ALQ969Q0 106 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-205ENST00000403276 TRBV10-1A0A0K0K1A3 114 aa11.22□□□□□ -0.61
CSNK1D-205ENST00000403276 LRCOL1A6NCL2 159 aa11.22□□□□□ -0.61
CSNK1D-205ENST00000403276 UBE2D3P61077 147 aa11.22□□□□□ -0.61
CSNK1D-205ENST00000403276 UBE2D2P62837 147 aa11.22□□□□□ -0.61
CSNK1D-205ENST00000403276 RIGQ13278 110 aa11.22□□□□□ -0.61
CSNK1D-205ENST00000403276 AP1S3Q96PC3 154 aa11.22□□□□□ -0.61
CSNK1D-205ENST00000403276 TRBV7-3A0A075B6L6 115 aa11.21□□□□□ -0.61
CSNK1D-205ENST00000403276 F5H697 171 aa11.21□□□□□ -0.61
CSNK1D-205ENST00000403276 TRGC1P0CF51 173 aa11.21□□□□□ -0.61
CSNK1D-205ENST00000403276 CDPF1Q6NVV7 123 aa11.21□□□□□ -0.61
CSNK1D-205ENST00000403276 KCNIP4Q6PIL6 250 aa11.21□□□□□ -0.61
CSNK1D-205ENST00000403276 NEXN-AS1Q8NBZ9 246 aa11.21□□□□□ -0.61
CSNK1D-205ENST00000403276 KIF25-AS1Q9Y6Z4 181 aa11.21□□□□□ -0.61
CSNK1D-205ENST00000403276 ATP6V1G1O75348 118 aa11.2□□□□□ -0.62
CSNK1D-205ENST00000403276 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
CSNK1D-205ENST00000403276 LAGE3Q14657 143 aa11.2□□□□□ -0.62
CSNK1D-205ENST00000403276 NIT1Q86X76 327 aa11.2□□□□□ -0.62
CSNK1D-205ENST00000403276 BTF3L4Q96K17 158 aa11.2□□□□□ -0.62
CSNK1D-205ENST00000403276 A0A1B0GXF2 115 aa11.19□□□□□ -0.62
CSNK1D-205ENST00000403276 S100PP25815 95 aa11.19□□□□□ -0.62
CSNK1D-205ENST00000403276 MRPL54Q6P161 138 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-205ENST00000403276 ATP5L2Q7Z4Y8 100 aa11.19□□□□□ -0.62
CSNK1D-205ENST00000403276 DNAJC30Q96LL9 226 aa11.19□□□□□ -0.62
CSNK1D-205ENST00000403276 URGCP-MRPS24S4R325 110 aa11.19□□□□□ -0.62
CSNK1D-205ENST00000403276 TRAV9-1A0A075B6T8 112 aa11.18□□□□□ -0.62
CSNK1D-205ENST00000403276 A0A1B0GW15 77 aa11.18□□□□□ -0.62
CSNK1D-205ENST00000403276 SMIM17P0DL12 118 aa11.18□□□□□ -0.62
CSNK1D-205ENST00000403276 SMIM15Q7Z3B0 74 aa11.18□□□□□ -0.62
CSNK1D-205ENST00000403276 DPH3P1Q9H4G8 78 aa11.18□□□□□ -0.62
CSNK1D-205ENST00000403276 TRAV8-3A0A0A6YYJ7 113 aa11.17□□□□□ -0.62
CSNK1D-205ENST00000403276 S100A1P23297 94 aa11.17□□□□□ -0.62
CSNK1D-205ENST00000403276 CAMPP49913 170 aa11.17□□□□□ -0.62
CSNK1D-205ENST00000403276 HBBP68871 147 aa11.17□□□□□ -0.62
CSNK1D-205ENST00000403276 WFDC2Q14508 124 aa11.17□□□□□ -0.62
CSNK1D-205ENST00000403276 TM2D2Q9BX73 214 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms