RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 K7EP13 123 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 SNAI2O43623 268 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 IFNA1P01562 189 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 CXCL1P09341 107 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 ZNF56Q15929 161 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 SPANXN1Q5VSR9 72 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 ALKAL2Q6UX46 152 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 DAZ4Q86SG3 579 aaKnown RBP3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 OR2D3Q8NGH3 330 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 DNAJC30Q96LL9 226 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 TPPP3Q9BW30 176 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 DAZ3Q9NR90 486 aaKnown RBP3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 TMA7Q9Y2S6 64 aaKnown RBP3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 C19orf71A6NCJ1 209 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 F5H697 171 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 PSCAO43653 123 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 PDE6DO43924 150 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 CDK2AP2O75956 126 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 OR5AL1P0C617 328 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 GNG4P50150 75 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 KRTAP10-1P60331 282 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 UBE2D3P61077 147 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 UBE2D2P62837 147 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 WFDC2Q14508 124 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 MAPKAPK5-AS1Q8N8E1 139 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 FER1L6-AS1Q8NA97 138 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 NEXN-AS1Q8NBZ9 246 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 DAZAP1Q96EP5 407 aaKnown RBP3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 CDIP1Q9H305 208 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 VAX2Q9UIW0 290 aa3.85□□□□□ -1.79
HMGB1P20-201ENST00000402555 TRBV7-3A0A075B6L6 115 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 A0A087WWC5 75 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 TRBV10-1A0A0K0K1A3 114 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 LRCOL1A6NCL2 159 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 K7EN84 100 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 LECT2O14960 151 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 P01737 135 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 MGPP08493 103 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 IGLC6P0CF74 106 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 RAB4BP61018 213 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 RPL36AP83881 106 aaKnown RBP3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 NIT1Q86X76 327 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 Q8N1X5 172 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 OCC1Q8TAD7 63 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 RPL36ALQ969Q0 106 aaKnown RBP3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 RNASE7Q9H1E1 156 aaKnown RBP3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 KIF25-AS1Q9Y6Z4 181 aa3.84□□□□□ -1.79
HMGB1P20-201ENST00000402555 FAT1Q14517 4588 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 SMIM17P0DL12 118 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 CEBPGP53567 150 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 RPS20P60866 119 aaKnown RBP3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 BLOC1S1P78537 153 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 HAMPP81172 84 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 LAGE3Q14657 143 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 TOR2AQ5JU69 321 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 LYZL1Q6UWQ5 148 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 NUDT10Q8NFP7 164 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 OR10G8Q8NGN5 311 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 DEFB104AQ8WTQ1 72 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 SMIM12Q96EX1 92 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 NUDT11Q96G61 164 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 AP1S3Q96PC3 154 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 KLK12Q9UKR0 248 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 URGCP-MRPS24S4R325 110 aa3.83□□□□□ -1.8
HMGB1P20-201ENST00000402555 SRRM2Q9UQ35 2752 aaKnown RBP3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 A0A087WX48 190 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 IGLV5-52A0A0A0MRZ9 124 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 TRBV6-8A0A0A6YYG3 113 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 TMEM262E9PQX1 116 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 NTF3P20783 257 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 GCSHP23434 173 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 TAGLN2P37802 199 aaKnown RBP3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 XGP55808 180 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 CACNG7P62955 275 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 MPV17L2Q567V2 206 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 SUMO4Q6EEV6 95 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 NTM-AS1Q6ZSK4 140 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 Q8N814 137 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 BAALCQ8WXS3 180 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 UBE2WQ96B02 151 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 CHCHD5Q9BSY4 110 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 TM2D2Q9BX73 214 aa3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 RPP21Q9H633 154 aaKnown RBP3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 FLG2Q5D862 2391 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P20-201ENST00000402555 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 IGKV2D-24A0A075B6R9 120 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 TRAV8-3A0A0A6YYJ7 113 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 XKRY2A2RUG3 117 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 TMEM250H0YL14 139 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 M0QY20 66 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 CTRLP40313 264 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 GAGE6Q13070 117 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 LINC01620Q4KN68 170 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 C15orf54Q8N8G6 183 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 Q8N976 141 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 LYPD6BQ8NI32 183 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 GTSF1Q8WW33 167 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 EIF5A2Q9GZV4 153 aaKnown RBP3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 BIN3Q9NQY0 253 aa3.81□□□□□ -1.8
HMGB1P20-201ENST00000402555 DNAH8Q96JB1 4490 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms