RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 WFDC2Q14508 124 aa11.22□□□□□ -0.61
COL25A1-201ENST00000399126 MUC4Q99102 2169 aa11.22□□□□□ -0.61
COL25A1-201ENST00000399126 TRAV12-3A0A0B4J271 114 aa11.22□□□□□ -0.61
COL25A1-201ENST00000399126 GNRH2O43555 120 aa11.22□□□□□ -0.61
COL25A1-201ENST00000399126 SPINK13Q1W4C9 94 aa11.22□□□□□ -0.61
COL25A1-201ENST00000399126 GATD1Q8NB37 220 aa11.22□□□□□ -0.61
COL25A1-201ENST00000399126 URB1-AS1Q96HZ7 61 aa11.22□□□□□ -0.61
COL25A1-201ENST00000399126 MT-ATP8P03928 68 aa11.21□□□□□ -0.61
COL25A1-201ENST00000399126 MALP21145 153 aa11.21□□□□□ -0.61
COL25A1-201ENST00000399126 FXYD7P58549 80 aa11.21□□□□□ -0.61
COL25A1-201ENST00000399126 ZNF493Q6ZR52 646 aa11.21□□□□□ -0.61
COL25A1-201ENST00000399126 IL17DQ8TAD2 202 aa11.21□□□□□ -0.62
COL25A1-201ENST00000399126 CNFNQ9BYD5 112 aa11.21□□□□□ -0.62
COL25A1-201ENST00000399126 CDIP1Q9H305 208 aa11.21□□□□□ -0.62
COL25A1-201ENST00000399126 CRLF1O75462 422 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 Q6ZUT4 128 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 TM2D2Q9BX73 214 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 RETNQ9HD89 108 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 GAGE12JA6NER3 117 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 SMKR1H3BMG3 65 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 GAGE7O76087 117 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 GAGE12FP0CL80 117 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 GAGE12GP0CL81 117 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 GAGE12IP0CL82 117 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 GAGE4Q13068 117 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 ETDBQ3ZM63 59 aa11.2□□□□□ -0.62
COL25A1-201ENST00000399126 ZNF256Q9Y2P7 627 aaPredicted RBP11.2□□□□□ -0.62
COL25A1-201ENST00000399126 GAS8-AS1O95177 125 aa11.19□□□□□ -0.62
COL25A1-201ENST00000399126 FAM104BQ5XKR9 115 aa11.19□□□□□ -0.62
COL25A1-201ENST00000399126 AMTNQ6UX39 209 aa11.19□□□□□ -0.62
COL25A1-201ENST00000399126 MAP6D1Q9H9H5 199 aa11.19□□□□□ -0.62
COL25A1-201ENST00000399126 SPANXA1Q9NS26 97 aa11.19□□□□□ -0.62
COL25A1-201ENST00000399126 RBMY1BA6NDE4 496 aaKnown RBP11.19□□□□□ -0.62
COL25A1-201ENST00000399126 RBMY1EA6NEQ0 496 aaKnown RBP11.19□□□□□ -0.62
COL25A1-201ENST00000399126 D6R8Y8 96 aa11.19□□□□□ -0.62
COL25A1-201ENST00000399126 RBMY1DP0C7P1 496 aaKnown RBP11.19□□□□□ -0.62
COL25A1-201ENST00000399126 SH2D6Q7Z4S9 175 aa11.19□□□□□ -0.62
COL25A1-201ENST00000399126 CYSRT1A8MQ03 144 aa11.18□□□□□ -0.62
COL25A1-201ENST00000399126 NCR2O95944 276 aa11.18□□□□□ -0.62
COL25A1-201ENST00000399126 MRPL51Q4U2R6 128 aaKnown RBP11.18□□□□□ -0.62
COL25A1-201ENST00000399126 C20orf78Q9BR46 151 aa11.18□□□□□ -0.62
COL25A1-201ENST00000399126 SMIM13P0DJ93 91 aa11.18□□□□□ -0.62
COL25A1-201ENST00000399126 EVI2AP22794 236 aa11.18□□□□□ -0.62
COL25A1-201ENST00000399126 ZFAND6Q6FIF0 208 aa11.18□□□□□ -0.62
COL25A1-201ENST00000399126 SYT8Q8NBV8 401 aa11.18□□□□□ -0.62
COL25A1-201ENST00000399126 RNF185Q96GF1 192 aa11.17□□□□□ -0.62
COL25A1-201ENST00000399126 OR5AL1P0C617 328 aa11.17□□□□□ -0.62
COL25A1-201ENST00000399126 RNASE3P12724 160 aaKnown RBP11.17□□□□□ -0.62
COL25A1-201ENST00000399126 ODF3L2Q3SX64 289 aa11.17□□□□□ -0.62
COL25A1-201ENST00000399126 LINC01620Q4KN68 170 aa11.17□□□□□ -0.62
COL25A1-201ENST00000399126 M0R381 172 aa11.16□□□□□ -0.62
COL25A1-201ENST00000399126 LEPROTL1O95214 131 aa11.16□□□□□ -0.62
COL25A1-201ENST00000399126 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
COL25A1-201ENST00000399126 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
COL25A1-201ENST00000399126 S100A4P26447 101 aaKnown RBP11.16□□□□□ -0.62
COL25A1-201ENST00000399126 RBMY1FQ15415 496 aaKnown RBP11.16□□□□□ -0.62
COL25A1-201ENST00000399126 SPANXN1Q5VSR9 72 aa11.16□□□□□ -0.62
COL25A1-201ENST00000399126 H3BMM0 161 aa11.16□□□□□ -0.62
COL25A1-201ENST00000399126 LEPP41159 167 aa11.16□□□□□ -0.62
COL25A1-201ENST00000399126 XGP55808 180 aa11.16□□□□□ -0.62
COL25A1-201ENST00000399126 ZNF415Q09FC8 603 aa11.16□□□□□ -0.62
COL25A1-201ENST00000399126 ODF3Q96PU9 254 aa11.16□□□□□ -0.62
COL25A1-201ENST00000399126 NHLRC4P0CG21 123 aaPredicted RBP11.15□□□□□ -0.62
COL25A1-201ENST00000399126 FGF6P10767 208 aa11.15□□□□□ -0.62
COL25A1-201ENST00000399126 HLA-DRB4P13762 266 aa11.15□□□□□ -0.62
COL25A1-201ENST00000399126 ASIPP42127 132 aa11.15□□□□□ -0.62
COL25A1-201ENST00000399126 MAP1LC3AQ9H492 121 aa11.15□□□□□ -0.62
COL25A1-201ENST00000399126 HLA-DRB4X5D2U9 266 aa11.15□□□□□ -0.62
COL25A1-201ENST00000399126 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.62
COL25A1-201ENST00000399126 DUSP14O95147 198 aaKnown RBP11.15□□□□□ -0.62
COL25A1-201ENST00000399126 INSL3P51460 131 aa11.15□□□□□ -0.62
COL25A1-201ENST00000399126 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.15□□□□□ -0.62
COL25A1-201ENST00000399126 PRM2P04554 102 aa11.14□□□□□ -0.63
COL25A1-201ENST00000399126 GATA1P15976 413 aaPredicted RBP11.14□□□□□ -0.63
COL25A1-201ENST00000399126 SPATA3Q8NHX4 192 aa11.14□□□□□ -0.63
COL25A1-201ENST00000399126 CD7P09564 240 aa11.14□□□□□ -0.63
COL25A1-201ENST00000399126 TRAV26-2A0A0B4J265 109 aa11.13□□□□□ -0.63
COL25A1-201ENST00000399126 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
COL25A1-201ENST00000399126 C4orf26Q17RF5 130 aa11.13□□□□□ -0.63
COL25A1-201ENST00000399126 PRELID3AQ96N28 172 aa11.13□□□□□ -0.63
COL25A1-201ENST00000399126 U3KQK5 164 aa11.13□□□□□ -0.63
COL25A1-201ENST00000399126 FBN1P35555 2871 aaKnown RBP11.13□□□□□ -0.63
COL25A1-201ENST00000399126 NPYP01303 97 aa11.13□□□□□ -0.63
COL25A1-201ENST00000399126 CKS2P33552 79 aa11.13□□□□□ -0.63
COL25A1-201ENST00000399126 LINC00173Q6ZV60 143 aa11.13□□□□□ -0.63
COL25A1-201ENST00000399126 ORMDL3Q8N138 153 aa11.13□□□□□ -0.63
COL25A1-201ENST00000399126 CHCHD1Q96BP2 118 aaKnown RBP11.13□□□□□ -0.63
COL25A1-201ENST00000399126 PHLDA3Q9Y5J5 127 aa11.13□□□□□ -0.63
COL25A1-201ENST00000399126 APOMO95445 188 aa11.12□□□□□ -0.63
COL25A1-201ENST00000399126 MDFICQ9P1T7 246 aa11.12□□□□□ -0.63
COL25A1-201ENST00000399126 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
COL25A1-201ENST00000399126 IGHV1-24A0A0C4DH33 117 aa11.12□□□□□ -0.63
COL25A1-201ENST00000399126 FOXI1Q12951 378 aa11.12□□□□□ -0.63
COL25A1-201ENST00000399126 LINC01545Q5VT33 79 aa11.12□□□□□ -0.63
COL25A1-201ENST00000399126 LINC00336Q6ZUF6 198 aa11.12□□□□□ -0.63
COL25A1-201ENST00000399126 NDUFA11Q86Y39 141 aa11.12□□□□□ -0.63
COL25A1-201ENST00000399126 Q8N1Y9 231 aa11.12□□□□□ -0.63
COL25A1-201ENST00000399126 ATP6V0E2Q8NHE4 81 aa11.12□□□□□ -0.63
COL25A1-201ENST00000399126 WFDC10AQ9H1F0 79 aa11.12□□□□□ -0.63
COL25A1-201ENST00000399126 CCDC179H3BU77 68 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms