RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 MUSTN1Q8IVN3 82 aa10.02□□□□□ -0.81
NFKB1-202ENST00000394820 TRAV8-4A0A0B4J246 113 aa10.02□□□□□ -0.81
NFKB1-202ENST00000394820 DEFB136Q30KP8 78 aa10.02□□□□□ -0.81
NFKB1-202ENST00000394820 DYNLRB2Q8TF09 96 aa10.02□□□□□ -0.81
NFKB1-202ENST00000394820 HIGD1BQ9P298 99 aa10.01□□□□□ -0.81
NFKB1-202ENST00000394820 PPP1R17O96001 155 aa10.01□□□□□ -0.81
NFKB1-202ENST00000394820 U3KQK5 164 aa10.01□□□□□ -0.81
NFKB1-202ENST00000394820 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
NFKB1-202ENST00000394820 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
NFKB1-202ENST00000394820 NRACQ8N912 160 aa10.01□□□□□ -0.81
NFKB1-202ENST00000394820 OR13C6PQ8NH95 151 aa10.01□□□□□ -0.81
NFKB1-202ENST00000394820 PIMREGQ9BSJ6 248 aa10.01□□□□□ -0.81
NFKB1-202ENST00000394820 TM2D2Q9BX73 214 aa10.01□□□□□ -0.81
NFKB1-202ENST00000394820 C1QTNF4Q9BXJ3 329 aa10.01□□□□□ -0.81
NFKB1-202ENST00000394820 IGHG4P01861 327 aa10□□□□□ -0.81
NFKB1-202ENST00000394820 C10orf99Q6UWK7 81 aa10□□□□□ -0.81
NFKB1-202ENST00000394820 M0R2P5 195 aa10□□□□□ -0.81
NFKB1-202ENST00000394820 TIMM21Q9BVV7 248 aa10□□□□□ -0.81
NFKB1-202ENST00000394820 ZNF580Q9UK33 172 aa10□□□□□ -0.81
NFKB1-202ENST00000394820 IGHV4-30-2A0A087WSY4 118 aa9.99□□□□□ -0.81
NFKB1-202ENST00000394820 DEFB131AP59861 70 aa9.99□□□□□ -0.81
NFKB1-202ENST00000394820 CFHR3Q02985 330 aa9.99□□□□□ -0.81
NFKB1-202ENST00000394820 AJUBAQ96IF1 538 aa9.99□□□□□ -0.81
NFKB1-202ENST00000394820 DAZ1Q9NQZ3 744 aaKnown RBP9.99□□□□□ -0.81
NFKB1-202ENST00000394820 ANKRD17O75179 2603 aaKnown RBP9.99□□□□□ -0.81
NFKB1-202ENST00000394820 IGHV7-4-1A0A0J9YVY3 117 aa9.98□□□□□ -0.81
NFKB1-202ENST00000394820 CLEC2BQ92478 149 aa9.98□□□□□ -0.81
NFKB1-202ENST00000394820 OOSP1A8MZH6 123 aa9.98□□□□□ -0.81
NFKB1-202ENST00000394820 XGP55808 180 aa9.98□□□□□ -0.81
NFKB1-202ENST00000394820 PAPPA-AS1Q5QFB9 102 aa9.98□□□□□ -0.81
NFKB1-202ENST00000394820 PROK1P58294 105 aa9.98□□□□□ -0.81
NFKB1-202ENST00000394820 Q6ZSV7 163 aa9.98□□□□□ -0.81
NFKB1-202ENST00000394820 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
NFKB1-202ENST00000394820 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
NFKB1-202ENST00000394820 CRIP2P52943 208 aaPredicted RBP9.97□□□□□ -0.81
NFKB1-202ENST00000394820 CFC1BP0CG36 223 aa9.97□□□□□ -0.81
NFKB1-202ENST00000394820 CFC1P0CG37 223 aa9.97□□□□□ -0.81
NFKB1-202ENST00000394820 NDUFA11Q86Y39 141 aa9.97□□□□□ -0.81
NFKB1-202ENST00000394820 XCL2Q9UBD3 114 aa9.97□□□□□ -0.81
NFKB1-202ENST00000394820 IGSF10Q6WRI0 2623 aa9.97□□□□□ -0.81
NFKB1-202ENST00000394820 CLPSL1A2RUU4 121 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 Q8N1Y9 231 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 Q8N6K4 173 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 C15orf53Q8NAA6 179 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 TOMM6Q96B49 74 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 NDUFA12Q9UI09 145 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 IGHV1-69DA0A0B4J2H0 117 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 IGHV1-69P01742 117 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 TAL2Q16559 108 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 Q6ZUT4 128 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 TEN1Q86WV5 123 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 C10orf126Q8N4M7 172 aa9.96□□□□□ -0.81
NFKB1-202ENST00000394820 TRBV6-1A0A0K0K1D8 114 aa9.96□□□□□ -0.82
NFKB1-202ENST00000394820 HOXD3P31249 432 aaPredicted RBP9.95□□□□□ -0.82
NFKB1-202ENST00000394820 NFE4Q86UQ8 179 aa9.95□□□□□ -0.82
NFKB1-202ENST00000394820 NEXN-AS1Q8NBZ9 246 aa9.95□□□□□ -0.82
NFKB1-202ENST00000394820 CHD6Q8TD26 2715 aa9.95□□□□□ -0.82
NFKB1-202ENST00000394820 SMIM20Q8N5G0 67 aa9.95□□□□□ -0.82
NFKB1-202ENST00000394820 C5orf56Q8N8D9 126 aa9.95□□□□□ -0.82
NFKB1-202ENST00000394820 GATA3P23771 443 aa9.95□□□□□ -0.82
NFKB1-202ENST00000394820 MORN3Q6PF18 240 aaPredicted RBP9.95□□□□□ -0.82
NFKB1-202ENST00000394820 ZFAND2AQ8N6M9 145 aa9.95□□□□□ -0.82
NFKB1-202ENST00000394820 CIRBPQ14011 172 aaKnown RBP9.94□□□□□ -0.82
NFKB1-202ENST00000394820 TMEM262E9PQX1 116 aa9.94□□□□□ -0.82
NFKB1-202ENST00000394820 C19orf54Q5BKX5 351 aa9.94□□□□□ -0.82
NFKB1-202ENST00000394820 C9orf47Q6ZRZ4 202 aa9.94□□□□□ -0.82
NFKB1-202ENST00000394820 A0A0J9YY99 117 aa9.93□□□□□ -0.82
NFKB1-202ENST00000394820 PRSS47A8MTI9 375 aa9.93□□□□□ -0.82
NFKB1-202ENST00000394820 ATXN8Q156A1 80 aa9.93□□□□□ -0.82
NFKB1-202ENST00000394820 C16orf54Q6UWD8 224 aa9.93□□□□□ -0.82
NFKB1-202ENST00000394820 TRBV7-3A0A075B6L6 115 aa9.93□□□□□ -0.82
NFKB1-202ENST00000394820 MUC4Q99102 2169 aa9.93□□□□□ -0.82
NFKB1-202ENST00000394820 TRGV1A0A0A0MS02 117 aa9.93□□□□□ -0.82
NFKB1-202ENST00000394820 IGHV4-59P01825 116 aa9.93□□□□□ -0.82
NFKB1-202ENST00000394820 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
NFKB1-202ENST00000394820 TSPEAR-AS2P59090 65 aa9.92□□□□□ -0.82
NFKB1-202ENST00000394820 APRG1Q8IVJ8 170 aa9.92□□□□□ -0.82
NFKB1-202ENST00000394820 EBI3Q14213 229 aa9.92□□□□□ -0.82
NFKB1-202ENST00000394820 H3BMM0 161 aa9.92□□□□□ -0.82
NFKB1-202ENST00000394820 UBE2WQ96B02 151 aa9.92□□□□□ -0.82
NFKB1-202ENST00000394820 IGHV1OR15-1A0A075B7D0 117 aa9.91□□□□□ -0.82
NFKB1-202ENST00000394820 PRORYQ9H606 182 aa9.91□□□□□ -0.82
NFKB1-202ENST00000394820 RNASE3P12724 160 aaKnown RBP9.91□□□□□ -0.82
NFKB1-202ENST00000394820 PRIMA1Q86XR5 153 aa9.91□□□□□ -0.82
NFKB1-202ENST00000394820 ZNRF2Q8NHG8 242 aa9.91□□□□□ -0.82
NFKB1-202ENST00000394820 TRBV7-9A0A0J9YWB2 115 aa9.91□□□□□ -0.82
NFKB1-202ENST00000394820 NDUFA4O00483 81 aa9.91□□□□□ -0.82
NFKB1-202ENST00000394820 UBE2L6O14933 153 aa9.9□□□□□ -0.82
NFKB1-202ENST00000394820 MSMBP08118 114 aa9.9□□□□□ -0.82
NFKB1-202ENST00000394820 I3L3M4 83 aa9.89□□□□□ -0.83
NFKB1-202ENST00000394820 AVPP01185 164 aa9.89□□□□□ -0.83
NFKB1-202ENST00000394820 CFAP126Q5VTH2 177 aa9.89□□□□□ -0.83
NFKB1-202ENST00000394820 TRAV4A0A0B4J268 109 aa9.89□□□□□ -0.83
NFKB1-202ENST00000394820 FAM223BA6NKX1 122 aa9.89□□□□□ -0.83
NFKB1-202ENST00000394820 LINC01620Q4KN68 170 aa9.89□□□□□ -0.83
NFKB1-202ENST00000394820 FAM223AQ8IWN6 122 aa9.89□□□□□ -0.83
NFKB1-202ENST00000394820 IGLV2-18A0A075B6J9 118 aa9.89□□□□□ -0.83
NFKB1-202ENST00000394820 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.89□□□□□ -0.83
NFKB1-202ENST00000394820 TRAV12-1A0A0B4J245 112 aa9.89□□□□□ -0.83
NFKB1-202ENST00000394820 TCTEX1D4Q5JR98 221 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms