RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 RPL18Q07020 188 aaKnown RBP1.59□□□□□ -2.15
PTPRC-205ENST00000391970 CST6Q15828 149 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 C1orf140Q5VVS0 124 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 RPS27LQ71UM5 84 aaKnown RBP1.59□□□□□ -2.15
PTPRC-205ENST00000391970 RPP25LQ8N5L8 163 aaKnown RBP1.59□□□□□ -2.15
PTPRC-205ENST00000391970 DAND5Q8N907 189 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 LINC00304Q8N9R0 145 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 BORCS8Q96FH0 119 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 CYSTM1Q9H1C7 97 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 ZNF286AQ9HBT8 521 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 CKLFQ9UBR5 152 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 TAC3Q9UHF0 121 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 RPUSD1Q9UJJ7 312 aaKnown RBP1.59□□□□□ -2.15
PTPRC-205ENST00000391970 KLK5Q9Y337 293 aaPredicted RBP1.59□□□□□ -2.15
PTPRC-205ENST00000391970 CEP192Q8TEP8 1941 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 EML5Q05BV3 1969 aa1.59□□□□□ -2.16
PTPRC-205ENST00000391970 TRPM6Q9BX84 2022 aa1.59□□□□□ -2.16
PTPRC-205ENST00000391970 CUL9Q8IWT3 2517 aa1.59□□□□□ -2.16
PTPRC-205ENST00000391970 NCOA6Q14686 2063 aaPredicted RBP1.59□□□□□ -2.16
PTPRC-205ENST00000391970 USP9XQ93008 2570 aaPredicted RBP1.58□□□□□ -2.16
PTPRC-205ENST00000391970 MAST4O15021 2626 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 KIAA1549Q9HCM3 1950 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 TRBV25-1A0A075B6N4 114 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 TRAV2A0A0B4J234 112 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 PGPA6NDG6 321 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 C8orf87E5RJ46 101 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 H7BZZ5 65 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 C19orf84I3L1E1 186 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 K7EQS6 105 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 SYNGR2O43760 224 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 SLC25A20O43772 301 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 HBDP02042 147 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 SCGB1C2P0DMR2 95 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 CCL4P13236 92 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 CSN1S1P47710 185 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 DAD1P61803 113 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 FKBP1AP62942 108 aaKnown RBP1.58□□□□□ -2.16
PTPRC-205ENST00000391970 LINC01590Q5TEZ4 76 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 HES3Q5TGS1 186 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 VN1R4Q7Z5H5 301 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 RPRMLQ8N4K4 120 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 OR8A1Q8NGG7 326 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 OR5C1Q8NGR4 320 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 CCL17Q92583 94 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 RNASE6Q93091 150 aaKnown RBP1.58□□□□□ -2.16
PTPRC-205ENST00000391970 DSCR8Q96T75 97 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 CXCL16Q9H2A7 254 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 RBM12B-AS1Q9P1G2 102 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 LINC00527Q9UJ94 153 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 COL4A1P02462 1669 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 PCDH15Q96QU1 1955 aa1.58□□□□□ -2.16
PTPRC-205ENST00000391970 SCN3AQ9NY46 2000 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 SETXQ7Z333 2677 aaKnown RBP1.57□□□□□ -2.16
PTPRC-205ENST00000391970 SEC16AO15027 2179 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 TRAV8-2A0A0B4J237 113 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 A0A0B4J2C4 111 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 TRBV27A0A0K0K1C4 114 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 TRBV10-3A0A0K0K1G6 114 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 TRBV10-2A0A0K0K1G8 114 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 KNCNA6PVL3 124 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 H3BMM0 161 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 COX7A2P2O60397 106 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 IGKV1D-33P01593 117 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 IGKV1-33P01594 117 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 DYNLT3P51808 116 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 HBBP68871 147 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 ASB16-AS1Q495Z4 193 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.57□□□□□ -2.16
PTPRC-205ENST00000391970 ATP5EP2Q5VTU8 51 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 MIC13Q5XKP0 118 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 Q6JHZ5 121 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 SLC48A1Q6P1K1 146 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 C6orf201Q7Z4U5 140 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 VMO1Q7Z5L0 202 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 LINC00596Q86U02 117 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 FAM19A2Q8N3H0 131 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 Q8N8P6 123 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 TMEM75Q8N9X5 138 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 UBE2WQ96B02 151 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 FAM103A1Q9BTL3 118 aaKnown RBP1.57□□□□□ -2.16
PTPRC-205ENST00000391970 DYNLRB1Q9NP97 96 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 NHP2Q9NX24 153 aaKnown RBP1.57□□□□□ -2.16
PTPRC-205ENST00000391970 EPDR1Q9UM22 224 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 HILPDAQ9Y5L2 63 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 ZNF706Q9Y5V0 76 aaPredicted RBP1.57□□□□□ -2.16
PTPRC-205ENST00000391970 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 NUMA1Q14980 2115 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 SHANK1Q9Y566 2161 aa1.57□□□□□ -2.16
PTPRC-205ENST00000391970 CEP350Q5VT06 3117 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 ABCA2Q9BZC7 2435 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 ZFHX3Q15911 3703 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 TRAV8-1A0A0A6YYK1 113 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 TRAV13-2A0A0B4J235 113 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 TRAV3A0A0B4J244 114 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 A0A0J9YW62 118 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 TRBV30A0A0K0K1B3 111 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 hADV29S1A0JD25 119 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 K7ERJ3 54 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 HMGN4O00479 90 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 NDUFB3O43676 98 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms