RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 IGHV3-33P01772 117 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 IGHV3-30-3P0DP02 117 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 IGHV3-30-5P0DP03 117 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 SSTP61278 116 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 PKIAP61925 76 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 CT83Q5H943 113 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 TEX261Q6UWH6 196 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 LYZL1Q6UWQ5 148 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 RNASE7Q9H1E1 156 aaKnown RBP8.54□□□□□ -1.04
GGPS1-203ENST00000391855 URGCP-MRPS24S4R325 110 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 ZNF727A8MUV8 499 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 A8MWL6 223 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 MGPP08493 103 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 SRP19P09132 144 aaKnown RBP8.54□□□□□ -1.04
GGPS1-203ENST00000391855 FAM74A3Q4VXF1 159 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 KCNIP4Q6PIL6 250 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 SPATA12Q7Z6I5 190 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 DAZ4Q86SG3 579 aaKnown RBP8.54□□□□□ -1.04
GGPS1-203ENST00000391855 DNAJC30Q96LL9 226 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 DPH3P1Q9H4G8 78 aa8.54□□□□□ -1.04
GGPS1-203ENST00000391855 DAZ3Q9NR90 486 aaKnown RBP8.54□□□□□ -1.04
GGPS1-203ENST00000391855 TRAV8-3A0A0A6YYJ7 113 aa8.53□□□□□ -1.04
GGPS1-203ENST00000391855 FAM229AH3BQW9 127 aa8.53□□□□□ -1.04
GGPS1-203ENST00000391855 PSCAO43653 123 aa8.53□□□□□ -1.04
GGPS1-203ENST00000391855 ELOBQ15370 118 aa8.53□□□□□ -1.04
GGPS1-203ENST00000391855 LINC01551Q86U37 167 aa8.53□□□□□ -1.04
GGPS1-203ENST00000391855 TM2D2Q9BX73 214 aa8.53□□□□□ -1.04
GGPS1-203ENST00000391855 SMDT1Q9H4I9 107 aa8.53□□□□□ -1.04
GGPS1-203ENST00000391855 TNFRSF18Q9Y5U5 241 aa8.53□□□□□ -1.04
GGPS1-203ENST00000391855 PKHD1P08F94 4074 aa8.52□□□□□ -1.05
GGPS1-203ENST00000391855 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.05
GGPS1-203ENST00000391855 NTF3P20783 257 aa8.52□□□□□ -1.05
GGPS1-203ENST00000391855 CDPF1Q6NVV7 123 aa8.52□□□□□ -1.05
GGPS1-203ENST00000391855 SMIM15Q7Z3B0 74 aa8.52□□□□□ -1.05
GGPS1-203ENST00000391855 NIT1Q86X76 327 aa8.52□□□□□ -1.05
GGPS1-203ENST00000391855 A0A087WTM6 91 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 A0A087WX48 190 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 M0QY20 66 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 PEA15Q15121 130 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 TWIST1Q15672 202 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 SUMO4Q6EEV6 95 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 FRZBQ92765 325 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 BORCS7Q96B45 105 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 RMI2Q96E14 147 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 Q9HAA7 133 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 OSTCQ9NRP0 149 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 COX11Q9Y6N1 276 aa8.51□□□□□ -1.05
GGPS1-203ENST00000391855 FAM231BA6NCW3 169 aa8.5□□□□□ -1.05
GGPS1-203ENST00000391855 FOXA3P55318 350 aaPredicted RBP8.5□□□□□ -1.05
GGPS1-203ENST00000391855 RASL11AQ6T310 242 aa8.5□□□□□ -1.05
GGPS1-203ENST00000391855 C15orf54Q8N8G6 183 aa8.5□□□□□ -1.05
GGPS1-203ENST00000391855 GTSF1Q8WW33 167 aa8.5□□□□□ -1.05
GGPS1-203ENST00000391855 GFRA4Q9GZZ7 299 aa8.5□□□□□ -1.05
GGPS1-203ENST00000391855 HERC2O95714 4834 aa8.5□□□□□ -1.05
GGPS1-203ENST00000391855 KIAA1109Q2LD37 5005 aa8.49□□□□□ -1.05
GGPS1-203ENST00000391855 TRBV25-1A0A075B6N4 114 aa8.48□□□□□ -1.05
GGPS1-203ENST00000391855 CDK2AP2O75956 126 aa8.48□□□□□ -1.05
GGPS1-203ENST00000391855 KRTAP10-2P60368 255 aa8.48□□□□□ -1.05
GGPS1-203ENST00000391855 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
GGPS1-203ENST00000391855 Q8N3U1 123 aa8.48□□□□□ -1.05
GGPS1-203ENST00000391855 TSKUQ8WUA8 353 aa8.48□□□□□ -1.05
GGPS1-203ENST00000391855 NIT2Q9NQR4 276 aa8.48□□□□□ -1.05
GGPS1-203ENST00000391855 NAT8Q9UHE5 227 aa8.48□□□□□ -1.05
GGPS1-203ENST00000391855 CHCHD5Q9BSY4 110 aa8.47□□□□□ -1.05
GGPS1-203ENST00000391855 IGHV1-24A0A0C4DH33 117 aa8.46□□□□□ -1.05
GGPS1-203ENST00000391855 TMEM262E9PQX1 116 aa8.46□□□□□ -1.05
GGPS1-203ENST00000391855 Q0VG73 95 aa8.46□□□□□ -1.05
GGPS1-203ENST00000391855 IQCJQ1A5X6 159 aa8.46□□□□□ -1.05
GGPS1-203ENST00000391855 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.05
GGPS1-203ENST00000391855 ISOC2Q96AB3 205 aa8.46□□□□□ -1.05
GGPS1-203ENST00000391855 PGLYRP4Q96LB8 373 aa8.46□□□□□ -1.05
GGPS1-203ENST00000391855 KLK12Q9UKR0 248 aa8.46□□□□□ -1.05
GGPS1-203ENST00000391855 A0A1B0GUT8 65 aa8.46□□□□□ -1.06
GGPS1-203ENST00000391855 LRCOL1A6NCL2 159 aa8.46□□□□□ -1.06
GGPS1-203ENST00000391855 HIGD1CA8MV81 97 aa8.46□□□□□ -1.06
GGPS1-203ENST00000391855 CRPP02741 224 aa8.46□□□□□ -1.06
GGPS1-203ENST00000391855 RAB14P61106 215 aa8.46□□□□□ -1.06
GGPS1-203ENST00000391855 RPL23P62829 140 aaKnown RBP8.46□□□□□ -1.06
GGPS1-203ENST00000391855 LRP1BQ9NZR2 4599 aa8.45□□□□□ -1.06
GGPS1-203ENST00000391855 ADIRFQ15847 76 aa8.45□□□□□ -1.06
GGPS1-203ENST00000391855 ATRAIDQ6UW56 229 aa8.45□□□□□ -1.06
GGPS1-203ENST00000391855 NTM-AS1Q6ZSK4 140 aa8.45□□□□□ -1.06
GGPS1-203ENST00000391855 UBE2WQ96B02 151 aa8.45□□□□□ -1.06
GGPS1-203ENST00000391855 V9GYV3 84 aa8.45□□□□□ -1.06
GGPS1-203ENST00000391855 C9JQL5 133 aa8.44□□□□□ -1.06
GGPS1-203ENST00000391855 MPV17L2Q567V2 206 aa8.44□□□□□ -1.06
GGPS1-203ENST00000391855 Q8N814 137 aa8.44□□□□□ -1.06
GGPS1-203ENST00000391855 TMEM191AQ9H0A3 160 aa8.44□□□□□ -1.06
GGPS1-203ENST00000391855 IGKV2D-24A0A075B6R9 120 aa8.43□□□□□ -1.06
GGPS1-203ENST00000391855 ANGP03950 147 aaKnown RBP8.43□□□□□ -1.06
GGPS1-203ENST00000391855 SRSF3P84103 164 aaKnown RBP8.43□□□□□ -1.06
GGPS1-203ENST00000391855 RIGQ13278 110 aa8.43□□□□□ -1.06
GGPS1-203ENST00000391855 COTL1Q14019 142 aa8.43□□□□□ -1.06
GGPS1-203ENST00000391855 GATD1Q8NB37 220 aa8.43□□□□□ -1.06
GGPS1-203ENST00000391855 TMEM243Q9BU79 118 aa8.43□□□□□ -1.06
GGPS1-203ENST00000391855 NAT8BQ9UHF3 227 aa8.43□□□□□ -1.06
GGPS1-203ENST00000391855 RYR1P21817 5038 aa8.43□□□□□ -1.06
GGPS1-203ENST00000391855 NCR2O95944 276 aa8.42□□□□□ -1.06
GGPS1-203ENST00000391855 RBX1P62877 108 aa8.42□□□□□ -1.06
GGPS1-203ENST00000391855 GAGE6Q13070 117 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms