RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 MUC22E2RYF6 1773 aaPredicted RBP0.46□□□□□ -2.34
TRAJ40-201ENST00000390497 ZNF462Q96JM2 2506 aa0.46□□□□□ -2.34
TRAJ40-201ENST00000390497 CLPSL1A2RUU4 121 aa0.45□□□□□ -2.34
TRAJ40-201ENST00000390497 SPTBP11277 2137 aa0.45□□□□□ -2.34
TRAJ40-201ENST00000390497 HIST1H1DP16402 221 aaKnown RBP0.45□□□□□ -2.34
TRAJ40-201ENST00000390497 INSL4Q14641 139 aa0.45□□□□□ -2.34
TRAJ40-201ENST00000390497 RPL13AP3Q6NVV1 102 aa0.45□□□□□ -2.34
TRAJ40-201ENST00000390497 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.45□□□□□ -2.34
TRAJ40-201ENST00000390497 AQP10Q96PS8 301 aa0.45□□□□□ -2.34
TRAJ40-201ENST00000390497 PLXNA1Q9UIW2 1896 aa0.45□□□□□ -2.34
TRAJ40-201ENST00000390497 PHIPQ8WWQ0 1821 aa0.45□□□□□ -2.34
TRAJ40-201ENST00000390497 SIPA1L3O60292 1781 aaPredicted RBP0.45□□□□□ -2.34
TRAJ40-201ENST00000390497 NWD2Q9ULI1 1742 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 NINQ8N4C6 2090 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 TRGV1A0A0A0MS02 117 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 TRAV13-2A0A0B4J235 113 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 SIX6O95475 246 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 MEIG1Q5JSS6 88 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 Q5VV11 94 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 SPINK6Q6UWN8 80 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 WFDC6Q9BQY6 131 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 LINC00312Q9Y6C7 94 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 SSC5DA1L4H1 1573 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 EIF4G3O43432 1585 aaKnown RBP0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 MYH13Q9UKX3 1938 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 PHLPP1O60346 1717 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 KNTC1P50748 2209 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
TRAJ40-201ENST00000390497 SPEF2Q9C093 1822 aa0.43□□□□□ -2.34
TRAJ40-201ENST00000390497 TRAV1-2A0A0B4J238 106 aa0.43□□□□□ -2.34
TRAJ40-201ENST00000390497 GCHFRP30047 84 aa0.43□□□□□ -2.34
TRAJ40-201ENST00000390497 Q56UQ5 140 aa0.43□□□□□ -2.34
TRAJ40-201ENST00000390497 Q6ZRX8 168 aa0.43□□□□□ -2.34
TRAJ40-201ENST00000390497 GOLGA3Q08378 1498 aa0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 WDR7Q9Y4E6 1490 aa0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 SMG6Q86US8 1419 aaKnown RBP0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 MIF4GDA9UHW6 222 aaKnown RBP0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 PIN1P1O15428 100 aa0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 NMBP08949 121 aa0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 COX6A2Q02221 97 aa0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 BAGE3Q86Y29 109 aa0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 Q8N8P6 123 aa0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 PPP3R2Q96LZ3 170 aa0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 ROCK2O75116 1388 aaKnown RBP0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 KTN1Q86UP2 1357 aaKnown RBP0.42□□□□□ -2.34
TRAJ40-201ENST00000390497 A2ML1A8K2U0 1454 aa0.41□□□□□ -2.34
TRAJ40-201ENST00000390497 PPIP5K1Q6PFW1 1433 aa0.41□□□□□ -2.34
TRAJ40-201ENST00000390497 HCG22E2RYF7 251 aa0.41□□□□□ -2.34
TRAJ40-201ENST00000390497 APOC2P02655 101 aa0.41□□□□□ -2.34
TRAJ40-201ENST00000390497 C8orf59Q8N0T1 100 aaPredicted RBP0.41□□□□□ -2.34
TRAJ40-201ENST00000390497 LSM10Q969L4 123 aaKnown RBP0.41□□□□□ -2.34
TRAJ40-201ENST00000390497 LENEPQ9Y5L5 61 aa0.41□□□□□ -2.34
TRAJ40-201ENST00000390497 TENM3Q9P273 2699 aa0.41□□□□□ -2.34
TRAJ40-201ENST00000390497 MYH6P13533 1939 aa0.4□□□□□ -2.34
TRAJ40-201ENST00000390497 ABCA4P78363 2273 aa0.4□□□□□ -2.34
TRAJ40-201ENST00000390497 ZNF609O15014 1411 aa0.4□□□□□ -2.34
TRAJ40-201ENST00000390497 NAV3Q8IVL0 2385 aa0.4□□□□□ -2.34
TRAJ40-201ENST00000390497 CCL18P55774 89 aa0.4□□□□□ -2.35
TRAJ40-201ENST00000390497 RBM3P98179 157 aaKnown RBP0.4□□□□□ -2.35
TRAJ40-201ENST00000390497 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
TRAJ40-201ENST00000390497 R4GMQ9 66 aa0.4□□□□□ -2.35
TRAJ40-201ENST00000390497 NALCNQ8IZF0 1738 aa0.4□□□□□ -2.35
TRAJ40-201ENST00000390497 FRAS1Q86XX4 4008 aa0.4□□□□□ -2.35
TRAJ40-201ENST00000390497 CPSF1Q10570 1443 aaKnown RBP0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 PARP14Q460N5 1801 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 IFNGP01579 166 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 KRTAP2-3P0C7H8 128 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 AKAIN1P0CW23 69 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 UBE2DNLQ8IWF7 75 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 PP6455Q8WZ26 134 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 SPANXDQ9BXN6 97 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 KRTAP2-4Q9BYR9 128 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 KRTAP2-1Q9BYU5 128 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 CYP4F30PQ9H0H9 118 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 MRC1P22897 1456 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 QRICH2Q9H0J4 1663 aa0.39□□□□□ -2.35
TRAJ40-201ENST00000390497 FAM135AQ9P2D6 1515 aa0.38□□□□□ -2.35
TRAJ40-201ENST00000390497 MYOM2P54296 1465 aa0.38□□□□□ -2.35
TRAJ40-201ENST00000390497 DLEU1O43261 78 aa0.38□□□□□ -2.35
TRAJ40-201ENST00000390497 SSSCA1O60232 199 aa0.38□□□□□ -2.35
TRAJ40-201ENST00000390497 PPP1R17O96001 155 aa0.38□□□□□ -2.35
TRAJ40-201ENST00000390497 TNFP01375 233 aa0.38□□□□□ -2.35
TRAJ40-201ENST00000390497 C10orf128Q5T292 105 aa0.38□□□□□ -2.35
TRAJ40-201ENST00000390497 SMIM4Q8WVI0 70 aa0.38□□□□□ -2.35
TRAJ40-201ENST00000390497 JMJD1CQ15652 2540 aa0.38□□□□□ -2.35
TRAJ40-201ENST00000390497 G3V318 75 aa0.37□□□□□ -2.35
TRAJ40-201ENST00000390497 CATR1Q13166 79 aa0.37□□□□□ -2.35
TRAJ40-201ENST00000390497 CFAP126Q5VTH2 177 aa0.37□□□□□ -2.35
TRAJ40-201ENST00000390497 TTC9CQ8N5M4 171 aa0.37□□□□□ -2.35
TRAJ40-201ENST00000390497 V9GYH0 126 aa0.37□□□□□ -2.35
TRAJ40-201ENST00000390497 IFT172Q9UG01 1749 aa0.37□□□□□ -2.35
TRAJ40-201ENST00000390497 ZMYM4Q5VZL5 1548 aa0.37□□□□□ -2.35
TRAJ40-201ENST00000390497 KIAA0100Q14667 2235 aaKnown RBP0.37□□□□□ -2.35
TRAJ40-201ENST00000390497 MEGF8Q7Z7M0 2845 aa0.37□□□□□ -2.35
TRAJ40-201ENST00000390497 LOC100130705A0A1B0GUX0 176 aa0.36□□□□□ -2.35
TRAJ40-201ENST00000390497 ATP5EP56381 51 aaPredicted RBP0.36□□□□□ -2.35
TRAJ40-201ENST00000390497 COX17Q14061 63 aa0.36□□□□□ -2.35
TRAJ40-201ENST00000390497 COMMD6Q7Z4G1 85 aa0.36□□□□□ -2.35
TRAJ40-201ENST00000390497 C5orf38Q86SI9 138 aa0.36□□□□□ -2.35
TRAJ40-201ENST00000390497 TMEM203Q969S6 136 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms