RNA–Protein interactions for RNA: ENST00000383897.1

RNU1-39P-201, Transcript of RNA, U1 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU1-39P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-39P-201ENST00000383897 LAMC3Q9Y6N6 1575 aa0.55□□□□□ -2.32
RNU1-39P-201ENST00000383897 PIN1P1O15428 100 aa0.55□□□□□ -2.32
RNU1-39P-201ENST00000383897 GNG7O60262 68 aa0.55□□□□□ -2.32
RNU1-39P-201ENST00000383897 SIX6O95475 246 aa0.55□□□□□ -2.32
RNU1-39P-201ENST00000383897 PRH1P02810 166 aa0.55□□□□□ -2.32
RNU1-39P-201ENST00000383897 S100A7L2Q5SY68 101 aa0.55□□□□□ -2.32
RNU1-39P-201ENST00000383897 Q5VV11 94 aa0.55□□□□□ -2.32
RNU1-39P-201ENST00000383897 BAGE3Q86Y29 109 aa0.55□□□□□ -2.32
RNU1-39P-201ENST00000383897 RBBP6Q7Z6E9 1792 aaKnown RBP0.55□□□□□ -2.32
RNU1-39P-201ENST00000383897 JMJD1CQ15652 2540 aa0.55□□□□□ -2.32
RNU1-39P-201ENST00000383897 TRGV1A0A0A0MS02 117 aa0.54□□□□□ -2.32
RNU1-39P-201ENST00000383897 TRAV13-2A0A0B4J235 113 aa0.54□□□□□ -2.32
RNU1-39P-201ENST00000383897 Q56UQ5 140 aa0.54□□□□□ -2.32
RNU1-39P-201ENST00000383897 Q6AWC8 147 aa0.54□□□□□ -2.32
RNU1-39P-201ENST00000383897 RPL13AP3Q6NVV1 102 aa0.54□□□□□ -2.32
RNU1-39P-201ENST00000383897 Q6ZRX8 168 aa0.54□□□□□ -2.32
RNU1-39P-201ENST00000383897 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.54□□□□□ -2.32
RNU1-39P-201ENST00000383897 Q96NJ1 140 aa0.54□□□□□ -2.32
RNU1-39P-201ENST00000383897 WFDC6Q9BQY6 131 aa0.54□□□□□ -2.32
RNU1-39P-201ENST00000383897 SPANXDQ9BXN6 97 aa0.54□□□□□ -2.32
RNU1-39P-201ENST00000383897 LINC00312Q9Y6C7 94 aa0.54□□□□□ -2.32
RNU1-39P-201ENST00000383897 ABCA1O95477 2261 aa0.53□□□□□ -2.32
RNU1-39P-201ENST00000383897 IFNGP01579 166 aa0.53□□□□□ -2.32
RNU1-39P-201ENST00000383897 APOC2P02655 101 aa0.53□□□□□ -2.32
RNU1-39P-201ENST00000383897 R4GMQ9 66 aa0.53□□□□□ -2.32
RNU1-39P-201ENST00000383897 LRRC37A3O60309 1634 aa0.53□□□□□ -2.33
RNU1-39P-201ENST00000383897 TANC1Q9C0D5 1861 aa0.52□□□□□ -2.33
RNU1-39P-201ENST00000383897 NMBP08949 121 aa0.52□□□□□ -2.33
RNU1-39P-201ENST00000383897 C8orf59Q8N0T1 100 aaPredicted RBP0.52□□□□□ -2.33
RNU1-39P-201ENST00000383897 LAMB1P07942 1786 aa0.52□□□□□ -2.33
RNU1-39P-201ENST00000383897 MYO7AQ13402 2215 aa0.52□□□□□ -2.33
RNU1-39P-201ENST00000383897 CACNA1EQ15878 2313 aa0.52□□□□□ -2.33
RNU1-39P-201ENST00000383897 BDP1A6H8Y1 2624 aa0.51□□□□□ -2.33
RNU1-39P-201ENST00000383897 SPAARA0A1B0GVQ0 90 aa0.51□□□□□ -2.33
RNU1-39P-201ENST00000383897 HCG22E2RYF7 251 aa0.51□□□□□ -2.33
RNU1-39P-201ENST00000383897 UNC13BO14795 1591 aa0.51□□□□□ -2.33
RNU1-39P-201ENST00000383897 AKAIN1P0CW23 69 aa0.51□□□□□ -2.33
RNU1-39P-201ENST00000383897 UBE2DNLQ8IWF7 75 aa0.51□□□□□ -2.33
RNU1-39P-201ENST00000383897 PXDNQ92626 1479 aa0.51□□□□□ -2.33
RNU1-39P-201ENST00000383897 BICRAQ9NZM4 1560 aa0.51□□□□□ -2.33
RNU1-39P-201ENST00000383897 NRXN2Q9P2S2 1712 aa0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 KTN1Q86UP2 1357 aaKnown RBP0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 USP24Q9UPU5 2620 aa0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 TRAV1-2A0A0B4J238 106 aa0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 A0A0D9SFI3 127 aa0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 PPP1R17O96001 155 aa0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 S100A3P33764 101 aa0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 RBM3P98179 157 aaKnown RBP0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 C10orf128Q5T292 105 aa0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 FAM213BQ8TBF2 198 aa0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 SMIM4Q8WVI0 70 aa0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 MYH6P13533 1939 aa0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 MAP2P11137 1827 aaKnown RBP0.5□□□□□ -2.33
RNU1-39P-201ENST00000383897 AKAP11Q9UKA4 1901 aa0.49□□□□□ -2.33
RNU1-39P-201ENST00000383897 CLPSL1A2RUU4 121 aa0.49□□□□□ -2.33
RNU1-39P-201ENST00000383897 SSSCA1O60232 199 aa0.49□□□□□ -2.33
RNU1-39P-201ENST00000383897 TTC9CQ8N5M4 171 aa0.49□□□□□ -2.33
RNU1-39P-201ENST00000383897 CYP4F30PQ9H0H9 118 aa0.49□□□□□ -2.33
RNU1-39P-201ENST00000383897 LENEPQ9Y5L5 61 aa0.49□□□□□ -2.33
RNU1-39P-201ENST00000383897 MED13LQ71F56 2210 aa0.49□□□□□ -2.33
RNU1-39P-201ENST00000383897 CASKIN1Q8WXD9 1431 aa0.48□□□□□ -2.33
RNU1-39P-201ENST00000383897 CADP27708 2225 aa0.48□□□□□ -2.33
RNU1-39P-201ENST00000383897 SPINK1P00995 79 aa0.48□□□□□ -2.33
RNU1-39P-201ENST00000383897 SPINK8P0C7L1 97 aa0.48□□□□□ -2.33
RNU1-39P-201ENST00000383897 Q8N8P6 123 aa0.48□□□□□ -2.33
RNU1-39P-201ENST00000383897 PP6455Q8WZ26 134 aa0.48□□□□□ -2.33
RNU1-39P-201ENST00000383897 PHIPQ8WWQ0 1821 aa0.48□□□□□ -2.33
RNU1-39P-201ENST00000383897 PPIP5K1Q6PFW1 1433 aa0.47□□□□□ -2.33
RNU1-39P-201ENST00000383897 MIF4GDA9UHW6 222 aaKnown RBP0.47□□□□□ -2.33
RNU1-39P-201ENST00000383897 CFAP126Q5VTH2 177 aa0.47□□□□□ -2.33
RNU1-39P-201ENST00000383897 F5P12259 2224 aa0.47□□□□□ -2.33
RNU1-39P-201ENST00000383897 PLXNA1Q9UIW2 1896 aa0.47□□□□□ -2.33
RNU1-39P-201ENST00000383897 TNS1Q9HBL0 1735 aaKnown RBP0.47□□□□□ -2.33
RNU1-39P-201ENST00000383897 ZNF609O15014 1411 aa0.47□□□□□ -2.33
RNU1-39P-201ENST00000383897 ROCK2O75116 1388 aaKnown RBP0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 MEGF8Q7Z7M0 2845 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 LOC285095A0A1B0GVY8 99 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 TNFP01375 233 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 CCL18P55774 89 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 SPAG11BQ08648 103 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 CATR1Q13166 79 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 COX17Q14061 63 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 Q5BKY6 102 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 SPAG11AQ6PDA7 123 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 MYOZ3Q8TDC0 251 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 LSM10Q969L4 123 aaKnown RBP0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 NPVFQ9HCQ7 196 aa0.46□□□□□ -2.34
RNU1-39P-201ENST00000383897 CTXND1A0A1B0GTU2 59 aa0.45□□□□□ -2.34
RNU1-39P-201ENST00000383897 TPPP2P59282 170 aa0.45□□□□□ -2.34
RNU1-39P-201ENST00000383897 MRPS10P82664 201 aaKnown RBP0.45□□□□□ -2.34
RNU1-39P-201ENST00000383897 MRPL54Q6P161 138 aaKnown RBP0.45□□□□□ -2.34
RNU1-39P-201ENST00000383897 TMEM203Q969S6 136 aa0.45□□□□□ -2.34
RNU1-39P-201ENST00000383897 MGST2Q99735 147 aa0.45□□□□□ -2.34
RNU1-39P-201ENST00000383897 SMG6Q86US8 1419 aaKnown RBP0.45□□□□□ -2.34
RNU1-39P-201ENST00000383897 TPRP12270 2363 aaKnown RBP0.45□□□□□ -2.34
RNU1-39P-201ENST00000383897 BCL9LQ86UU0 1499 aa0.44□□□□□ -2.34
RNU1-39P-201ENST00000383897 ABCA12Q86UK0 2595 aa0.44□□□□□ -2.34
RNU1-39P-201ENST00000383897 PARP14Q460N5 1801 aa0.44□□□□□ -2.34
RNU1-39P-201ENST00000383897 APOC3P02656 99 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms