RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 G3V318 75 aa6.11□□□□□ -1.43
PTPRR-203ENST00000378778 CCDC179H3BU77 68 aa6.11□□□□□ -1.43
PTPRR-203ENST00000378778 NPFFO15130 113 aa6.11□□□□□ -1.43
PTPRR-203ENST00000378778 SETXQ7Z333 2677 aaKnown RBP6.1□□□□□ -1.43
PTPRR-203ENST00000378778 FRYQ5TBA9 3013 aa6.1□□□□□ -1.43
PTPRR-203ENST00000378778 ASPMQ8IZT6 3477 aa6.1□□□□□ -1.43
PTPRR-203ENST00000378778 TRGV11A0A075B6L2 103 aa6.1□□□□□ -1.43
PTPRR-203ENST00000378778 TEX49A0A1B0GTD5 131 aa6.1□□□□□ -1.43
PTPRR-203ENST00000378778 CRLF1O75462 422 aa6.1□□□□□ -1.43
PTPRR-203ENST00000378778 IGHV3-30-3P0DP02 117 aa6.1□□□□□ -1.43
PTPRR-203ENST00000378778 CXCL5P42830 114 aa6.1□□□□□ -1.43
PTPRR-203ENST00000378778 IGHV3-49A0A0A0MS15 119 aa6.1□□□□□ -1.43
PTPRR-203ENST00000378778 IGHV4-39P01824 125 aa6.1□□□□□ -1.43
PTPRR-203ENST00000378778 SAA4P35542 130 aa6.1□□□□□ -1.43
PTPRR-203ENST00000378778 LINC01560Q8TB33 94 aa6.1□□□□□ -1.43
PTPRR-203ENST00000378778 DAZ1Q9NQZ3 744 aaKnown RBP6.1□□□□□ -1.43
PTPRR-203ENST00000378778 USP24Q9UPU5 2620 aa6.09□□□□□ -1.43
PTPRR-203ENST00000378778 SPEGQ15772 3267 aa6.09□□□□□ -1.43
PTPRR-203ENST00000378778 GPR179Q6PRD1 2367 aa6.09□□□□□ -1.43
PTPRR-203ENST00000378778 EMP1P54849 157 aa6.09□□□□□ -1.43
PTPRR-203ENST00000378778 MEIG1Q5JSS6 88 aa6.09□□□□□ -1.43
PTPRR-203ENST00000378778 TMEM61Q8N0U2 210 aa6.09□□□□□ -1.43
PTPRR-203ENST00000378778 PRORYQ9H606 182 aa6.09□□□□□ -1.43
PTPRR-203ENST00000378778 TGFAP01135 160 aa6.09□□□□□ -1.44
PTPRR-203ENST00000378778 ZFP36P26651 326 aaKnown RBP6.09□□□□□ -1.44
PTPRR-203ENST00000378778 LINC00643Q86TS7 51 aa6.09□□□□□ -1.44
PTPRR-203ENST00000378778 ARHGAP32A7KAX9 2087 aa6.09□□□□□ -1.44
PTPRR-203ENST00000378778 MUC4Q99102 2169 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 CIRBPQ14011 172 aaKnown RBP6.08□□□□□ -1.44
PTPRR-203ENST00000378778 ZNF56Q15929 161 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 VSIG2Q96IQ7 327 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 RHPN1-AS1Q9BWJ2 59 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 NDUFA12Q9UI09 145 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 NBEAQ8NFP9 2946 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 IGHV1OR15-1A0A075B7D0 117 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 A0A0J9YXV3 536 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 TIRAPP58753 221 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 FAM222AQ5U5X8 452 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 SDIM1Q6ZPB5 146 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 TNFRSF18Q9Y5U5 241 aa6.08□□□□□ -1.44
PTPRR-203ENST00000378778 TMEM89A2RUT3 159 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 TRACP01848 142 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 IGHG2P01859 326 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 UNQ9165/PRO28630Q6UXU0 137 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 DNAJC30Q96LL9 226 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 FAM208BQ5VWN6 2430 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 A0A087WWL8 130 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 H7C2G1 150 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 NDUFA1O15239 70 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 CD28P10747 220 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 NBL1P41271 181 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 DAND5Q8N907 189 aa6.07□□□□□ -1.44
PTPRR-203ENST00000378778 IGLV5-45A0A087WSX0 123 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 ELANEP08246 267 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 HERV-K104P63124 156 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 SMIM20Q8N5G0 67 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 DCANP1Q8TF63 244 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 OVOL2Q9BRP0 275 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 C1orf43Q9BWL3 253 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 PEMTQ9UBM1 199 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 ZFYVE26Q68DK2 2539 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 FLNBO75369 2602 aaKnown RBP6.06□□□□□ -1.44
PTPRR-203ENST00000378778 COX7A2LO14548 114 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 UQCRQO14949 82 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 INAFM2P0DMQ5 153 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 SNRPD3P62318 126 aaKnown RBP6.06□□□□□ -1.44
PTPRR-203ENST00000378778 RPL11P62913 178 aaKnown RBP6.06□□□□□ -1.44
PTPRR-203ENST00000378778 ZNF415Q09FC8 603 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 LINC01587Q99440 93 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 PIMREGQ9BSJ6 248 aa6.06□□□□□ -1.44
PTPRR-203ENST00000378778 A0A1B0GX51 115 aa6.05□□□□□ -1.44
PTPRR-203ENST00000378778 IGLV1-40P01703 118 aa6.05□□□□□ -1.44
PTPRR-203ENST00000378778 PRSS2P07478 247 aa6.05□□□□□ -1.44
PTPRR-203ENST00000378778 FAM19A3Q7Z5A8 133 aa6.05□□□□□ -1.44
PTPRR-203ENST00000378778 C3orf22Q8N5N4 141 aa6.05□□□□□ -1.44
PTPRR-203ENST00000378778 JPT2Q9H910 190 aa6.05□□□□□ -1.44
PTPRR-203ENST00000378778 PKDREJQ9NTG1 2253 aa6.05□□□□□ -1.44
PTPRR-203ENST00000378778 TRAV12-3A0A0B4J271 114 aa6.04□□□□□ -1.44
PTPRR-203ENST00000378778 LMO4P61968 165 aa6.04□□□□□ -1.44
PTPRR-203ENST00000378778 LRRC75A-AS1Q8N1F1 130 aa6.04□□□□□ -1.44
PTPRR-203ENST00000378778 LINC00526Q96FQ7 95 aa6.04□□□□□ -1.44
PTPRR-203ENST00000378778 SPXQ9BT56 116 aa6.04□□□□□ -1.44
PTPRR-203ENST00000378778 BEX4Q9NWD9 120 aaPredicted RBP6.04□□□□□ -1.44
PTPRR-203ENST00000378778 F6UB75 175 aa6.04□□□□□ -1.44
PTPRR-203ENST00000378778 SPRY2O43597 315 aa6.04□□□□□ -1.44
PTPRR-203ENST00000378778 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
PTPRR-203ENST00000378778 FAM74A4Q5TZK3 123 aa6.04□□□□□ -1.44
PTPRR-203ENST00000378778 FREM2Q5SZK8 3169 aa6.03□□□□□ -1.44
PTPRR-203ENST00000378778 KHDC1LQ5JSQ8 128 aa6.03□□□□□ -1.44
PTPRR-203ENST00000378778 LINC00467Q9BRT7 94 aa6.03□□□□□ -1.44
PTPRR-203ENST00000378778 DSPP15924 2871 aaKnown RBP6.03□□□□□ -1.44
PTPRR-203ENST00000378778 LY6HO94772 140 aa6.03□□□□□ -1.44
PTPRR-203ENST00000378778 ADAMTSL4-AS1Q5T5F5 129 aa6.03□□□□□ -1.44
PTPRR-203ENST00000378778 SHISA2Q6UWI4 295 aa6.03□□□□□ -1.44
PTPRR-203ENST00000378778 C5orf38Q86SI9 138 aa6.03□□□□□ -1.44
PTPRR-203ENST00000378778 UNC79Q9P2D8 2635 aa6.03□□□□□ -1.44
PTPRR-203ENST00000378778 A6NDX4 124 aa6.02□□□□□ -1.45
PTPRR-203ENST00000378778 A8MTW9 85 aa6.02□□□□□ -1.45
PTPRR-203ENST00000378778 OPRPNQ99935 248 aaPredicted RBP6.02□□□□□ -1.45
PTPRR-203ENST00000378778 ZZEF1O43149 2961 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms