RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 DAND5Q8N907 189 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 GATD1Q8NB37 220 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 PSMG3-AS1Q96PY0 264 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 ZNF469Q96JG9 3925 aaPredicted RBP6.04□□□□□ -1.44
CKAP2-203ENST00000378037 ZNF815PA8K554 130 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 F5H768 121 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 GPHB5Q86YW7 130 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 SPAG8Q99932 426 aaPredicted RBP6.04□□□□□ -1.44
CKAP2-203ENST00000378037 ZNF747Q9BV97 191 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 MAP6D1Q9H9H5 199 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 IGKCP01834 107 aa6.03□□□□□ -1.44
CKAP2-203ENST00000378037 MEIG1Q5JSS6 88 aa6.03□□□□□ -1.44
CKAP2-203ENST00000378037 COL5A1-AS1Q5SY13 56 aa6.03□□□□□ -1.44
CKAP2-203ENST00000378037 NXT2Q9NPJ8 142 aaKnown RBP6.03□□□□□ -1.44
CKAP2-203ENST00000378037 TSSC4Q9Y5U2 329 aaPredicted RBP6.03□□□□□ -1.44
CKAP2-203ENST00000378037 A8MZ25 164 aa6.03□□□□□ -1.44
CKAP2-203ENST00000378037 CRLF1O75462 422 aa6.03□□□□□ -1.44
CKAP2-203ENST00000378037 IGLC3P0DOY3 106 aa6.03□□□□□ -1.44
CKAP2-203ENST00000378037 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.03□□□□□ -1.44
CKAP2-203ENST00000378037 SMIM2Q9BVW6 85 aa6.03□□□□□ -1.44
CKAP2-203ENST00000378037 LOC100131303A0A0U1RQF7 123 aa6.02□□□□□ -1.45
CKAP2-203ENST00000378037 A0A1B0GXF2 115 aa6.02□□□□□ -1.45
CKAP2-203ENST00000378037 DPM2O94777 84 aa6.02□□□□□ -1.45
CKAP2-203ENST00000378037 LGALS3P17931 250 aaKnown RBP6.02□□□□□ -1.45
CKAP2-203ENST00000378037 URB1-AS1Q96HZ7 61 aa6.02□□□□□ -1.45
CKAP2-203ENST00000378037 TMEM238C9JI98 176 aa6.02□□□□□ -1.45
CKAP2-203ENST00000378037 IGLV1-40P01703 118 aa6.02□□□□□ -1.45
CKAP2-203ENST00000378037 DCANP1Q8TF63 244 aa6.02□□□□□ -1.45
CKAP2-203ENST00000378037 CHCHD1Q96BP2 118 aaKnown RBP6.02□□□□□ -1.45
CKAP2-203ENST00000378037 MRAP2Q96G30 205 aa6.02□□□□□ -1.45
CKAP2-203ENST00000378037 VPS25Q9BRG1 176 aa6.02□□□□□ -1.45
CKAP2-203ENST00000378037 GFRA4Q9GZZ7 299 aa6.02□□□□□ -1.45
CKAP2-203ENST00000378037 CD5LO43866 347 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 DEFB114Q30KQ6 69 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 ZNF479Q96JC4 524 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 K7EQG2 157 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 NDUFA7O95182 113 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 CT83Q5H943 113 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 TRGV11A0A075B6L2 103 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 A0A0J9YXV3 536 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 PPBPP02775 128 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 C19orf54Q5BKX5 351 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 AMTNQ6UX39 209 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 C9orf47Q6ZRZ4 202 aa6.01□□□□□ -1.45
CKAP2-203ENST00000378037 LBHQ53QV2 105 aaPredicted RBP6□□□□□ -1.45
CKAP2-203ENST00000378037 MRPL53Q96EL3 112 aaKnown RBP6□□□□□ -1.45
CKAP2-203ENST00000378037 H3BMM0 161 aa6□□□□□ -1.45
CKAP2-203ENST00000378037 ATP5LO75964 103 aa6□□□□□ -1.45
CKAP2-203ENST00000378037 RNASE3P12724 160 aaKnown RBP6□□□□□ -1.45
CKAP2-203ENST00000378037 SPINK8P0C7L1 97 aa6□□□□□ -1.45
CKAP2-203ENST00000378037 FOXI2Q6ZQN5 318 aa6□□□□□ -1.45
CKAP2-203ENST00000378037 CHAC1Q9BUX1 264 aa6□□□□□ -1.45
CKAP2-203ENST00000378037 TENM2Q9NT68 2774 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 TRAV8-3A0A0A6YYJ7 113 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 PPP1R17O96001 155 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 LINC01559Q495D7 138 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 RASL11AQ6T310 242 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 SPATA3Q8NHX4 192 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 RETNQ9HD89 108 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 IGKV2D-26A0A0A0MRZ7 120 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 HERVK_113P61574 105 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 ODF3L2Q3SX64 289 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 PET117Q6UWS5 81 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 Q8N976 141 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 RASL10AQ92737 203 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 A0A1B0GW15 77 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 GAGE10A6NGK3 116 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 VCYO14598 125 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 NXPH4O95158 308 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 HLA-DRB4P13762 266 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 PFN2P35080 140 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 C12orf54Q6X4T0 127 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 RNF185Q96GF1 192 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 ATP6V0BQ99437 205 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 HLA-DRB4X5D2U9 266 aa5.99□□□□□ -1.45
CKAP2-203ENST00000378037 TRRAPQ9Y4A5 3859 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 IGLC6P0CF74 106 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 ORMDL2Q53FV1 153 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 C5orf38Q86SI9 138 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 OR13C6PQ8NH95 151 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 LINC00526Q96FQ7 95 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 A0A087WX48 190 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 COA6Q5JTJ3 125 aaKnown RBP5.98□□□□□ -1.45
CKAP2-203ENST00000378037 PRADC1Q9BSG0 188 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 FAM231BA6NCW3 169 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 H7C1H1 209 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 RPL36AP83881 106 aaKnown RBP5.98□□□□□ -1.45
CKAP2-203ENST00000378037 KLF5Q13887 457 aaPredicted RBP5.98□□□□□ -1.45
CKAP2-203ENST00000378037 Q8N8P6 123 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 C4orf3Q8WVX3 66 aa5.98□□□□□ -1.45
CKAP2-203ENST00000378037 RPL36ALQ969Q0 106 aaKnown RBP5.98□□□□□ -1.45
CKAP2-203ENST00000378037 CR1P17927 2039 aa5.97□□□□□ -1.45
CKAP2-203ENST00000378037 H3BUA1 57 aa5.97□□□□□ -1.45
CKAP2-203ENST00000378037 RBMY1A1P0DJD3 496 aaKnown RBP5.97□□□□□ -1.45
CKAP2-203ENST00000378037 RBMY1CP0DJD4 496 aa5.97□□□□□ -1.45
CKAP2-203ENST00000378037 XCL1P47992 114 aa5.97□□□□□ -1.45
CKAP2-203ENST00000378037 RBMY1FQ15415 496 aaKnown RBP5.97□□□□□ -1.45
CKAP2-203ENST00000378037 TEX29Q8N6K0 151 aa5.97□□□□□ -1.45
CKAP2-203ENST00000378037 ZNF580Q9UK33 172 aa5.97□□□□□ -1.45
CKAP2-203ENST00000378037 CTRLP40313 264 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms