RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 NOP10Q9NPE3 64 aaKnown RBP8.4□□□□□ -1.07
HDAC6-203ENST00000376619 TRGV11A0A075B6L2 103 aa8.39□□□□□ -1.07
HDAC6-203ENST00000376619 HSD52Q0P140 79 aa8.39□□□□□ -1.07
HDAC6-203ENST00000376619 UBE2V1Q13404 147 aa8.39□□□□□ -1.07
HDAC6-203ENST00000376619 IGKV2D-26A0A0A0MRZ7 120 aa8.39□□□□□ -1.07
HDAC6-203ENST00000376619 HLA-DRB4P13762 266 aa8.39□□□□□ -1.07
HDAC6-203ENST00000376619 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
HDAC6-203ENST00000376619 HLA-DRB4X5D2U9 266 aa8.39□□□□□ -1.07
HDAC6-203ENST00000376619 MRPS12O15235 138 aaKnown RBP8.38□□□□□ -1.07
HDAC6-203ENST00000376619 OR13C6PQ8NH95 151 aa8.38□□□□□ -1.07
HDAC6-203ENST00000376619 IGHV4-31P0DP07 118 aa8.38□□□□□ -1.07
HDAC6-203ENST00000376619 C9orf47Q6ZRZ4 202 aa8.38□□□□□ -1.07
HDAC6-203ENST00000376619 ZFAND2AQ8N6M9 145 aa8.38□□□□□ -1.07
HDAC6-203ENST00000376619 PGPEP1Q9NXJ5 209 aa8.38□□□□□ -1.07
HDAC6-203ENST00000376619 U3KQE9 123 aa8.38□□□□□ -1.07
HDAC6-203ENST00000376619 ELANEP08246 267 aa8.38□□□□□ -1.07
HDAC6-203ENST00000376619 ZNF415Q09FC8 603 aa8.38□□□□□ -1.07
HDAC6-203ENST00000376619 FXYD2P54710 66 aa8.37□□□□□ -1.07
HDAC6-203ENST00000376619 LGALS9BQ3B8N2 356 aa8.37□□□□□ -1.07
HDAC6-203ENST00000376619 LINC01545Q5VT33 79 aa8.37□□□□□ -1.07
HDAC6-203ENST00000376619 LGALS9CQ6DKI2 356 aa8.37□□□□□ -1.07
HDAC6-203ENST00000376619 OR9G4Q8NGQ1 327 aa8.37□□□□□ -1.07
HDAC6-203ENST00000376619 A0A0J9YXV3 536 aa8.37□□□□□ -1.07
HDAC6-203ENST00000376619 J3QR89 54 aa8.37□□□□□ -1.07
HDAC6-203ENST00000376619 IGLC6P0CF74 106 aa8.37□□□□□ -1.07
HDAC6-203ENST00000376619 CTRLP40313 264 aa8.37□□□□□ -1.07
HDAC6-203ENST00000376619 NIPBLQ6KC79 2804 aaeCLIP8.37□□□□□ -1.07
HDAC6-203ENST00000376619 TRBV25-1A0A075B6N4 114 aa8.37□□□□□ -1.07
HDAC6-203ENST00000376619 DAND5Q8N907 189 aa8.37□□□□□ -1.07
HDAC6-203ENST00000376619 TMEM238LA0A1B0GVL6 79 aa8.36□□□□□ -1.07
HDAC6-203ENST00000376619 A6NJY4 79 aa8.36□□□□□ -1.07
HDAC6-203ENST00000376619 INSP01308 110 aa8.36□□□□□ -1.07
HDAC6-203ENST00000376619 IGHG4P01861 327 aa8.36□□□□□ -1.07
HDAC6-203ENST00000376619 AZU1P20160 251 aa8.36□□□□□ -1.07
HDAC6-203ENST00000376619 PAX2Q02962 417 aa8.36□□□□□ -1.07
HDAC6-203ENST00000376619 F8VRH5 84 aa8.36□□□□□ -1.07
HDAC6-203ENST00000376619 H3BMG7 143 aa8.36□□□□□ -1.07
HDAC6-203ENST00000376619 LINC01549A6NIU2 74 aa8.36□□□□□ -1.07
HDAC6-203ENST00000376619 ETDBQ3ZM63 59 aa8.36□□□□□ -1.07
HDAC6-203ENST00000376619 RNF185Q96GF1 192 aa8.36□□□□□ -1.07
HDAC6-203ENST00000376619 A0A0J9YY99 117 aa8.35□□□□□ -1.07
HDAC6-203ENST00000376619 PLNP26678 52 aa8.35□□□□□ -1.07
HDAC6-203ENST00000376619 LURAP1LQ8IV03 231 aa8.35□□□□□ -1.07
HDAC6-203ENST00000376619 SPINK8P0C7L1 97 aa8.35□□□□□ -1.07
HDAC6-203ENST00000376619 Q8N976 141 aa8.35□□□□□ -1.07
HDAC6-203ENST00000376619 RASL10AQ92737 203 aa8.35□□□□□ -1.07
HDAC6-203ENST00000376619 A0A0J9YX75 114 aa8.34□□□□□ -1.07
HDAC6-203ENST00000376619 DNAJC9-AS1A6NH13 148 aa8.34□□□□□ -1.07
HDAC6-203ENST00000376619 SEC11AP67812 179 aa8.34□□□□□ -1.07
HDAC6-203ENST00000376619 ODF1Q14990 250 aa8.34□□□□□ -1.07
HDAC6-203ENST00000376619 MRPL53Q96EL3 112 aaKnown RBP8.34□□□□□ -1.07
HDAC6-203ENST00000376619 ZNF48Q96MX3 618 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-203ENST00000376619 SCRT2Q9NQ03 307 aa8.34□□□□□ -1.07
HDAC6-203ENST00000376619 GAGE6Q13070 117 aa8.34□□□□□ -1.07
HDAC6-203ENST00000376619 RBAKDNA6NC62 111 aa8.34□□□□□ -1.07
HDAC6-203ENST00000376619 RPL36AP83881 106 aaKnown RBP8.33□□□□□ -1.08
HDAC6-203ENST00000376619 ZFP2Q6ZN57 461 aa8.33□□□□□ -1.08
HDAC6-203ENST00000376619 GPHB5Q86YW7 130 aa8.33□□□□□ -1.08
HDAC6-203ENST00000376619 RPL36ALQ969Q0 106 aaKnown RBP8.33□□□□□ -1.08
HDAC6-203ENST00000376619 A0A087WX48 190 aa8.33□□□□□ -1.08
HDAC6-203ENST00000376619 J3QLI3 93 aa8.33□□□□□ -1.08
HDAC6-203ENST00000376619 PMVKQ15126 192 aa8.33□□□□□ -1.08
HDAC6-203ENST00000376619 PAPPA-AS1Q5QFB9 102 aa8.33□□□□□ -1.08
HDAC6-203ENST00000376619 MXRA5Q9NR99 2828 aa8.33□□□□□ -1.08
HDAC6-203ENST00000376619 TRPT1Q86TN4 253 aaKnown RBP8.32□□□□□ -1.08
HDAC6-203ENST00000376619 ATP6V0BQ99437 205 aa8.32□□□□□ -1.08
HDAC6-203ENST00000376619 TRAV8-3A0A0A6YYJ7 113 aa8.32□□□□□ -1.08
HDAC6-203ENST00000376619 RNASE8Q8TDE3 154 aaKnown RBP8.32□□□□□ -1.08
HDAC6-203ENST00000376619 C11orf86A6NJI1 115 aa8.32□□□□□ -1.08
HDAC6-203ENST00000376619 A8MZ25 164 aa8.32□□□□□ -1.08
HDAC6-203ENST00000376619 Q6ZSV7 163 aa8.32□□□□□ -1.08
HDAC6-203ENST00000376619 I3L3M4 83 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 RNASE3P12724 160 aaKnown RBP8.31□□□□□ -1.08
HDAC6-203ENST00000376619 PSMB8P28062 276 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 MAPKAPK5-AS1Q8N8E1 139 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 TMEM101Q96IK0 257 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 PFN2P35080 140 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 SMAGPQ0VAQ4 97 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 SAMD13Q5VXD3 122 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 FOXI2Q6ZQN5 318 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 ZNF493Q6ZR52 646 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 SPAG8Q99932 426 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-203ENST00000376619 TIMM21Q9BVV7 248 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 TAX1BP3O14907 124 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 SH2D6Q7Z4S9 175 aa8.31□□□□□ -1.08
HDAC6-203ENST00000376619 GTSF1LQ9H1H1 148 aa8.3□□□□□ -1.08
HDAC6-203ENST00000376619 CST9LQ9H4G1 147 aa8.3□□□□□ -1.08
HDAC6-203ENST00000376619 MYMXA0A1B0GTQ4 84 aa8.3□□□□□ -1.08
HDAC6-203ENST00000376619 FGF6P10767 208 aa8.3□□□□□ -1.08
HDAC6-203ENST00000376619 H3BUA1 57 aa8.3□□□□□ -1.08
HDAC6-203ENST00000376619 DEFB125Q8N687 156 aa8.3□□□□□ -1.08
HDAC6-203ENST00000376619 BAALCQ8WXS3 180 aa8.3□□□□□ -1.08
HDAC6-203ENST00000376619 CIRBPQ14011 172 aaKnown RBP8.29□□□□□ -1.08
HDAC6-203ENST00000376619 Q6YL49 198 aa8.29□□□□□ -1.08
HDAC6-203ENST00000376619 Q6ZTI0 123 aa8.29□□□□□ -1.08
HDAC6-203ENST00000376619 PRIMA1Q86XR5 153 aa8.29□□□□□ -1.08
HDAC6-203ENST00000376619 CSMD2Q7Z408 3487 aa8.29□□□□□ -1.08
HDAC6-203ENST00000376619 APCP25054 2843 aa8.29□□□□□ -1.08
HDAC6-203ENST00000376619 IGLV10-54A0A075B6I4 117 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms