RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 LINC01556Q5JQF7 62 aa10.78□□□□□ -0.68
C11orf88-202ENST00000375618 NAT8Q9UHE5 227 aa10.78□□□□□ -0.68
C11orf88-202ENST00000375618 DNAH11Q96DT5 4516 aa10.78□□□□□ -0.68
C11orf88-202ENST00000375618 TRAV8-6A0A0B4J262 113 aa10.77□□□□□ -0.69
C11orf88-202ENST00000375618 IGHV3-30P01768 117 aa10.77□□□□□ -0.69
C11orf88-202ENST00000375618 IGHV3-33P01772 117 aa10.77□□□□□ -0.69
C11orf88-202ENST00000375618 TRGC1P0CF51 173 aa10.77□□□□□ -0.69
C11orf88-202ENST00000375618 IGHV3-30-3P0DP02 117 aa10.77□□□□□ -0.69
C11orf88-202ENST00000375618 IGHV3-30-5P0DP03 117 aa10.77□□□□□ -0.69
C11orf88-202ENST00000375618 CLLU1Q5K131 121 aa10.77□□□□□ -0.69
C11orf88-202ENST00000375618 TSKUQ8WUA8 353 aa10.77□□□□□ -0.69
C11orf88-202ENST00000375618 DPH3P1Q9H4G8 78 aa10.77□□□□□ -0.69
C11orf88-202ENST00000375618 RAB14P61106 215 aa10.76□□□□□ -0.69
C11orf88-202ENST00000375618 HIGD1CA8MV81 97 aa10.75□□□□□ -0.69
C11orf88-202ENST00000375618 BTF3P20290 206 aaKnown RBP10.75□□□□□ -0.69
C11orf88-202ENST00000375618 NTM-AS1Q6ZSK4 140 aa10.75□□□□□ -0.69
C11orf88-202ENST00000375618 DYNC1H1Q14204 4646 aaKnown RBP10.74□□□□□ -0.69
C11orf88-202ENST00000375618 A0A087WWC5 75 aa10.74□□□□□ -0.69
C11orf88-202ENST00000375618 TRAV26-2A0A0B4J265 109 aa10.74□□□□□ -0.69
C11orf88-202ENST00000375618 C15orf54Q8N8G6 183 aa10.74□□□□□ -0.69
C11orf88-202ENST00000375618 GFRA4Q9GZZ7 299 aa10.74□□□□□ -0.69
C11orf88-202ENST00000375618 TRAV9-2A0A087WT02 112 aa10.73□□□□□ -0.69
C11orf88-202ENST00000375618 IBA57-AS1B1ANH7 110 aa10.73□□□□□ -0.69
C11orf88-202ENST00000375618 DAZ4Q86SG3 579 aaKnown RBP10.73□□□□□ -0.69
C11orf88-202ENST00000375618 NIT1Q86X76 327 aa10.73□□□□□ -0.69
C11orf88-202ENST00000375618 GATD1Q8NB37 220 aa10.73□□□□□ -0.69
C11orf88-202ENST00000375618 NUP35Q8NFH5 326 aa10.73□□□□□ -0.69
C11orf88-202ENST00000375618 DAZ3Q9NR90 486 aaKnown RBP10.73□□□□□ -0.69
C11orf88-202ENST00000375618 TRBV6-8A0A0A6YYG3 113 aa10.72□□□□□ -0.69
C11orf88-202ENST00000375618 K7EP13 123 aa10.72□□□□□ -0.69
C11orf88-202ENST00000375618 RASL11AQ6T310 242 aa10.72□□□□□ -0.69
C11orf88-202ENST00000375618 PKHD1P08F94 4074 aa10.72□□□□□ -0.69
C11orf88-202ENST00000375618 A0A1B0GUT8 65 aa10.71□□□□□ -0.69
C11orf88-202ENST00000375618 FAM231BA6NCW3 169 aa10.71□□□□□ -0.69
C11orf88-202ENST00000375618 GAS8-AS1O95177 125 aa10.71□□□□□ -0.69
C11orf88-202ENST00000375618 C10orf126Q8N4M7 172 aa10.71□□□□□ -0.69
C11orf88-202ENST00000375618 DEFB104AQ8WTQ1 72 aa10.71□□□□□ -0.69
C11orf88-202ENST00000375618 RPL39LQ96EH5 51 aaKnown RBP10.71□□□□□ -0.69
C11orf88-202ENST00000375618 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.69
C11orf88-202ENST00000375618 SMIM27A0A1W2PRY6 76 aa10.7□□□□□ -0.7
C11orf88-202ENST00000375618 H7C1H1 209 aa10.7□□□□□ -0.7
C11orf88-202ENST00000375618 RNF185Q96GF1 192 aa10.7□□□□□ -0.7
C11orf88-202ENST00000375618 Q9HAA7 133 aa10.7□□□□□ -0.7
C11orf88-202ENST00000375618 NIT2Q9NQR4 276 aa10.7□□□□□ -0.7
C11orf88-202ENST00000375618 KRTAP10-2P60368 255 aa10.69□□□□□ -0.7
C11orf88-202ENST00000375618 ADCYAP1P18509 176 aa10.68□□□□□ -0.7
C11orf88-202ENST00000375618 FUSP35637 526 aaKnown RBP eCLIP10.68□□□□□ -0.7
C11orf88-202ENST00000375618 NFE4Q86UQ8 179 aa10.68□□□□□ -0.7
C11orf88-202ENST00000375618 BORCS7Q96B45 105 aa10.68□□□□□ -0.7
C11orf88-202ENST00000375618 AMN1Q8IY45 258 aa10.67□□□□□ -0.7
C11orf88-202ENST00000375618 TMEM191AQ9H0A3 160 aa10.67□□□□□ -0.7
C11orf88-202ENST00000375618 NAT8BQ9UHF3 227 aa10.67□□□□□ -0.7
C11orf88-202ENST00000375618 RAB4AP20338 218 aa10.66□□□□□ -0.7
C11orf88-202ENST00000375618 RIGQ13278 110 aa10.66□□□□□ -0.7
C11orf88-202ENST00000375618 LAGE3Q14657 143 aa10.66□□□□□ -0.7
C11orf88-202ENST00000375618 MPV17L2Q567V2 206 aa10.66□□□□□ -0.7
C11orf88-202ENST00000375618 SMIM15Q7Z3B0 74 aa10.66□□□□□ -0.7
C11orf88-202ENST00000375618 SPATA12Q7Z6I5 190 aa10.66□□□□□ -0.7
C11orf88-202ENST00000375618 KLK12Q9UKR0 248 aa10.66□□□□□ -0.7
C11orf88-202ENST00000375618 A0A087WTM6 91 aa10.65□□□□□ -0.7
C11orf88-202ENST00000375618 RPS10P46783 165 aaKnown RBP10.65□□□□□ -0.7
C11orf88-202ENST00000375618 IQCJQ1A5X6 159 aa10.65□□□□□ -0.7
C11orf88-202ENST00000375618 Q8N976 141 aa10.65□□□□□ -0.7
C11orf88-202ENST00000375618 CHCHD5Q9BSY4 110 aa10.65□□□□□ -0.7
C11orf88-202ENST00000375618 KIAA1109Q2LD37 5005 aa10.64□□□□□ -0.71
C11orf88-202ENST00000375618 LRCOL1A6NCL2 159 aa10.64□□□□□ -0.71
C11orf88-202ENST00000375618 GAGE6Q13070 117 aa10.64□□□□□ -0.71
C11orf88-202ENST00000375618 TMEM97Q5BJF2 176 aa10.64□□□□□ -0.71
C11orf88-202ENST00000375618 ATRAIDQ6UW56 229 aa10.64□□□□□ -0.71
C11orf88-202ENST00000375618 MAPKAPK5-AS1Q8N8E1 139 aa10.64□□□□□ -0.71
C11orf88-202ENST00000375618 A0A087WX48 190 aa10.63□□□□□ -0.71
C11orf88-202ENST00000375618 IGHV1-24A0A0C4DH33 117 aa10.63□□□□□ -0.71
C11orf88-202ENST00000375618 A0A1B0GXF2 115 aa10.63□□□□□ -0.71
C11orf88-202ENST00000375618 TMEM262E9PQX1 116 aa10.63□□□□□ -0.71
C11orf88-202ENST00000375618 SMKR1H3BMG3 65 aa10.63□□□□□ -0.71
C11orf88-202ENST00000375618 NCR2O95944 276 aa10.63□□□□□ -0.71
C11orf88-202ENST00000375618 WFDC2Q14508 124 aa10.63□□□□□ -0.71
C11orf88-202ENST00000375618 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.63□□□□□ -0.71
C11orf88-202ENST00000375618 FRZBQ92765 325 aa10.63□□□□□ -0.71
C11orf88-202ENST00000375618 CHCHD7Q9BUK0 85 aa10.63□□□□□ -0.71
C11orf88-202ENST00000375618 URGCP-MRPS24S4R325 110 aa10.63□□□□□ -0.71
C11orf88-202ENST00000375618 TRBV25-1A0A075B6N4 114 aa10.62□□□□□ -0.71
C11orf88-202ENST00000375618 TMEM218A2RU14 115 aa10.62□□□□□ -0.71
C11orf88-202ENST00000375618 CAMPP49913 170 aa10.62□□□□□ -0.71
C11orf88-202ENST00000375618 RBX1P62877 108 aa10.62□□□□□ -0.71
C11orf88-202ENST00000375618 PNRC1Q12796 327 aaPredicted RBP10.62□□□□□ -0.71
C11orf88-202ENST00000375618 MRPL54Q6P161 138 aaKnown RBP10.62□□□□□ -0.71
C11orf88-202ENST00000375618 UQCC3Q6UW78 93 aa10.62□□□□□ -0.71
C11orf88-202ENST00000375618 ENHOQ6UWT2 76 aa10.62□□□□□ -0.71
C11orf88-202ENST00000375618 COMMD7Q86VX2 200 aa10.62□□□□□ -0.71
C11orf88-202ENST00000375618 UBE2WQ96B02 151 aa10.62□□□□□ -0.71
C11orf88-202ENST00000375618 DNAH5Q8TE73 4624 aa10.62□□□□□ -0.71
C11orf88-202ENST00000375618 HERC2O95714 4834 aa10.61□□□□□ -0.71
C11orf88-202ENST00000375618 TRBV6-5A0A0K0K1A5 114 aa10.61□□□□□ -0.71
C11orf88-202ENST00000375618 SDHAF1A6NFY7 115 aa10.61□□□□□ -0.71
C11orf88-202ENST00000375618 C16orf90A8MZG2 172 aa10.61□□□□□ -0.71
C11orf88-202ENST00000375618 TRAV8-3A0A0A6YYJ7 113 aa10.6□□□□□ -0.71
C11orf88-202ENST00000375618 COTL1Q14019 142 aa10.6□□□□□ -0.71
C11orf88-202ENST00000375618 FAM104BQ5XKR9 115 aa10.6□□□□□ -0.71
C11orf88-202ENST00000375618 KCNIP4Q6PIL6 250 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms