RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 TRPT1Q86TN4 253 aaKnown RBP13.39□□□□□ -0.27
HNF4A-203ENST00000372920 CLUHP3Q96NS8 147 aa13.39□□□□□ -0.27
HNF4A-203ENST00000372920 VPS13CQ709C8 3753 aa13.39□□□□□ -0.27
HNF4A-203ENST00000372920 RHODO00212 210 aa13.38□□□□□ -0.27
HNF4A-203ENST00000372920 SLC25A20O43772 301 aa13.38□□□□□ -0.27
HNF4A-203ENST00000372920 MUSTN1Q8IVN3 82 aa13.38□□□□□ -0.27
HNF4A-203ENST00000372920 C20orf203Q8NBC4 194 aa13.38□□□□□ -0.27
HNF4A-203ENST00000372920 C9JAW5 83 aa13.38□□□□□ -0.27
HNF4A-203ENST00000372920 C19orf84I3L1E1 186 aa13.38□□□□□ -0.27
HNF4A-203ENST00000372920 ERG28Q9UKR5 140 aa13.38□□□□□ -0.27
HNF4A-203ENST00000372920 A0A0J9YXV3 536 aa13.37□□□□□ -0.27
HNF4A-203ENST00000372920 ZNF580Q9UK33 172 aa13.37□□□□□ -0.27
HNF4A-203ENST00000372920 HIVEP3Q5T1R4 2406 aa13.37□□□□□ -0.27
HNF4A-203ENST00000372920 CFHR3Q02985 330 aa13.37□□□□□ -0.27
HNF4A-203ENST00000372920 A0A0B4J2C4 111 aa13.36□□□□□ -0.27
HNF4A-203ENST00000372920 A0A0J9YX75 114 aa13.36□□□□□ -0.27
HNF4A-203ENST00000372920 ODF3Q96PU9 254 aa13.36□□□□□ -0.27
HNF4A-203ENST00000372920 IGLV4-3A0A075B6K6 122 aa13.36□□□□□ -0.27
HNF4A-203ENST00000372920 TMEM95Q3KNT9 176 aa13.36□□□□□ -0.27
HNF4A-203ENST00000372920 IGHV1OR15-1A0A075B7D0 117 aa13.35□□□□□ -0.27
HNF4A-203ENST00000372920 I3L3M4 83 aa13.35□□□□□ -0.27
HNF4A-203ENST00000372920 SPINK13Q1W4C9 94 aa13.35□□□□□ -0.27
HNF4A-203ENST00000372920 Q5PR19 223 aa13.34□□□□□ -0.27
HNF4A-203ENST00000372920 ELANEP08246 267 aa13.34□□□□□ -0.27
HNF4A-203ENST00000372920 PIMREGQ9BSJ6 248 aa13.34□□□□□ -0.27
HNF4A-203ENST00000372920 M0R2P5 195 aa13.33□□□□□ -0.28
HNF4A-203ENST00000372920 COL12A1Q99715 3063 aa13.33□□□□□ -0.28
HNF4A-203ENST00000372920 A0A0J9YXY3 114 aa13.33□□□□□ -0.28
HNF4A-203ENST00000372920 M0QXV9 152 aa13.33□□□□□ -0.28
HNF4A-203ENST00000372920 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.28
HNF4A-203ENST00000372920 TMEM262E9PQX1 116 aa13.33□□□□□ -0.28
HNF4A-203ENST00000372920 Q1RN00 199 aa13.33□□□□□ -0.28
HNF4A-203ENST00000372920 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.32□□□□□ -0.28
HNF4A-203ENST00000372920 ADARB2-AS1A8MUL3 147 aa13.32□□□□□ -0.28
HNF4A-203ENST00000372920 SPXQ9BT56 116 aa13.31□□□□□ -0.28
HNF4A-203ENST00000372920 K7EQG2 157 aa13.31□□□□□ -0.28
HNF4A-203ENST00000372920 IGHV3-30-3P0DP02 117 aa13.31□□□□□ -0.28
HNF4A-203ENST00000372920 PSMB8P28062 276 aa13.3□□□□□ -0.28
HNF4A-203ENST00000372920 C10orf99Q6UWK7 81 aa13.3□□□□□ -0.28
HNF4A-203ENST00000372920 C10orf105Q8TEF2 133 aa13.3□□□□□ -0.28
HNF4A-203ENST00000372920 ATXN8Q156A1 80 aa13.29□□□□□ -0.28
HNF4A-203ENST00000372920 LY6DQ14210 128 aa13.29□□□□□ -0.28
HNF4A-203ENST00000372920 FAM104AQ969W3 186 aa13.29□□□□□ -0.28
HNF4A-203ENST00000372920 RNF183Q96D59 192 aa13.29□□□□□ -0.28
HNF4A-203ENST00000372920 BEX4Q9NWD9 120 aaPredicted RBP13.29□□□□□ -0.28
HNF4A-203ENST00000372920 CD28P10747 220 aa13.29□□□□□ -0.28
HNF4A-203ENST00000372920 LINC01620Q4KN68 170 aa13.29□□□□□ -0.28
HNF4A-203ENST00000372920 NTN5Q8WTR8 489 aaPredicted RBP13.29□□□□□ -0.28
HNF4A-203ENST00000372920 LITAFQ99732 161 aa13.29□□□□□ -0.28
HNF4A-203ENST00000372920 TIMM21Q9BVV7 248 aa13.29□□□□□ -0.28
HNF4A-203ENST00000372920 IGHV3-73A0A0B4J1V6 119 aa13.28□□□□□ -0.28
HNF4A-203ENST00000372920 ZFAND6Q6FIF0 208 aa13.28□□□□□ -0.28
HNF4A-203ENST00000372920 CEMP1Q6PRD7 247 aaPredicted RBP13.28□□□□□ -0.28
HNF4A-203ENST00000372920 TRAV8-3A0A0A6YYJ7 113 aa13.27□□□□□ -0.28
HNF4A-203ENST00000372920 TRIAP1O43715 76 aa13.27□□□□□ -0.29
HNF4A-203ENST00000372920 CITED1Q99966 193 aa13.27□□□□□ -0.29
HNF4A-203ENST00000372920 PROK1P58294 105 aa13.26□□□□□ -0.29
HNF4A-203ENST00000372920 MRPS36P82909 103 aaKnown RBP13.26□□□□□ -0.29
HNF4A-203ENST00000372920 TEX29Q8N6K0 151 aa13.26□□□□□ -0.29
HNF4A-203ENST00000372920 PYGO1Q9Y3Y4 419 aa13.26□□□□□ -0.29
HNF4A-203ENST00000372920 IGHV4-30-2A0A087WSY4 118 aa13.26□□□□□ -0.29
HNF4A-203ENST00000372920 AVPP01185 164 aa13.26□□□□□ -0.29
HNF4A-203ENST00000372920 PRSS2P07478 247 aa13.26□□□□□ -0.29
HNF4A-203ENST00000372920 TRGV11A0A075B6L2 103 aa13.26□□□□□ -0.29
HNF4A-203ENST00000372920 TRBV30A0A0K0K1B3 111 aa13.26□□□□□ -0.29
HNF4A-203ENST00000372920 MSMBP08118 114 aa13.26□□□□□ -0.29
HNF4A-203ENST00000372920 RNASE13Q5GAN3 156 aaKnown RBP13.26□□□□□ -0.29
HNF4A-203ENST00000372920 ADAMTSL4-AS1Q5T5F5 129 aa13.25□□□□□ -0.29
HNF4A-203ENST00000372920 ANAPC13Q9BS18 74 aa13.25□□□□□ -0.29
HNF4A-203ENST00000372920 SYNJ2BPP57105 145 aa13.25□□□□□ -0.29
HNF4A-203ENST00000372920 RBMY1A1P0DJD3 496 aaKnown RBP13.24□□□□□ -0.29
HNF4A-203ENST00000372920 RBMY1CP0DJD4 496 aa13.24□□□□□ -0.29
HNF4A-203ENST00000372920 HTN1P15515 57 aa13.24□□□□□ -0.29
HNF4A-203ENST00000372920 RBMY1FQ15415 496 aaKnown RBP13.24□□□□□ -0.29
HNF4A-203ENST00000372920 CCL19Q99731 98 aa13.24□□□□□ -0.29
HNF4A-203ENST00000372920 TEX49A0A1B0GTD5 131 aa13.24□□□□□ -0.29
HNF4A-203ENST00000372920 GATA3P23771 443 aa13.24□□□□□ -0.29
HNF4A-203ENST00000372920 IGHV1-58A0A0C4DH39 117 aa13.23□□□□□ -0.29
HNF4A-203ENST00000372920 TRBV10-2A0A0K0K1G8 114 aa13.23□□□□□ -0.29
HNF4A-203ENST00000372920 DUX5Q96PT3 197 aa13.23□□□□□ -0.29
HNF4A-203ENST00000372920 NDUFA12Q9UI09 145 aa13.23□□□□□ -0.29
HNF4A-203ENST00000372920 LINC01600Q96MT4 127 aa13.23□□□□□ -0.29
HNF4A-203ENST00000372920 IGHV4-59P01825 116 aa13.22□□□□□ -0.29
HNF4A-203ENST00000372920 EDA2RQ9HAV5 297 aa13.22□□□□□ -0.29
HNF4A-203ENST00000372920 A8MZ25 164 aa13.22□□□□□ -0.29
HNF4A-203ENST00000372920 Q9UF83 564 aa13.22□□□□□ -0.29
HNF4A-203ENST00000372920 GNLYP22749 145 aa13.21□□□□□ -0.29
HNF4A-203ENST00000372920 RPL13AP40429 203 aaKnown RBP13.21□□□□□ -0.29
HNF4A-203ENST00000372920 ICOSQ9Y6W8 199 aa13.21□□□□□ -0.29
HNF4A-203ENST00000372920 CRLF1O75462 422 aa13.21□□□□□ -0.29
HNF4A-203ENST00000372920 ATP5J2P56134 94 aa13.21□□□□□ -0.29
HNF4A-203ENST00000372920 RNF152Q8N8N0 203 aa13.21□□□□□ -0.29
HNF4A-203ENST00000372920 SPANXDQ9BXN6 97 aa13.21□□□□□ -0.29
HNF4A-203ENST00000372920 SPANXCQ9NY87 97 aa13.21□□□□□ -0.29
HNF4A-203ENST00000372920 TNFRSF18Q9Y5U5 241 aa13.21□□□□□ -0.29
HNF4A-203ENST00000372920 MAP1AP78559 2803 aaPredicted RBP13.21□□□□□ -0.29
HNF4A-203ENST00000372920 VSIG2Q96IQ7 327 aa13.21□□□□□ -0.3
HNF4A-203ENST00000372920 TRAV4A0A0B4J268 109 aa13.2□□□□□ -0.3
HNF4A-203ENST00000372920 KNCNA6PVL3 124 aa13.2□□□□□ -0.3
HNF4A-203ENST00000372920 SNCGO76070 127 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms