RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 PRR20CP86479 221 aa11.96□□□□□ -0.49
GTF3C4-201ENST00000372146 PRR20DP86480 221 aa11.96□□□□□ -0.49
GTF3C4-201ENST00000372146 PRR20BP86481 221 aa11.96□□□□□ -0.49
GTF3C4-201ENST00000372146 PRR20AP86496 221 aa11.96□□□□□ -0.49
GTF3C4-201ENST00000372146 MIAQ16674 131 aa11.96□□□□□ -0.49
GTF3C4-201ENST00000372146 COL8A2P25067 703 aa11.96□□□□□ -0.5
GTF3C4-201ENST00000372146 LRRC75A-AS1Q8N1F1 130 aa11.96□□□□□ -0.5
GTF3C4-201ENST00000372146 COX7BP24311 80 aa11.95□□□□□ -0.5
GTF3C4-201ENST00000372146 NDUFA1O15239 70 aa11.95□□□□□ -0.5
GTF3C4-201ENST00000372146 SERTAD4-AS1Q5TG53 156 aa11.95□□□□□ -0.5
GTF3C4-201ENST00000372146 SERP1Q9Y6X1 66 aa11.95□□□□□ -0.5
GTF3C4-201ENST00000372146 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
GTF3C4-201ENST00000372146 TRBV7-3A0A075B6L6 115 aa11.94□□□□□ -0.5
GTF3C4-201ENST00000372146 E9PLN8 166 aa11.94□□□□□ -0.5
GTF3C4-201ENST00000372146 BPESC1Q9GZL8 116 aa11.94□□□□□ -0.5
GTF3C4-201ENST00000372146 NFE4Q86UQ8 179 aa11.94□□□□□ -0.5
GTF3C4-201ENST00000372146 IGHV3-30P01768 117 aa11.94□□□□□ -0.5
GTF3C4-201ENST00000372146 IGHV3-33P01772 117 aa11.94□□□□□ -0.5
GTF3C4-201ENST00000372146 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
GTF3C4-201ENST00000372146 IGHV3-30-5P0DP03 117 aa11.94□□□□□ -0.5
GTF3C4-201ENST00000372146 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.93□□□□□ -0.5
GTF3C4-201ENST00000372146 A0A0G2JNJ9 132 aa11.93□□□□□ -0.5
GTF3C4-201ENST00000372146 Q9UFV3 132 aa11.93□□□□□ -0.5
GTF3C4-201ENST00000372146 EPOPA6NHQ4 379 aa11.93□□□□□ -0.5
GTF3C4-201ENST00000372146 Q6ZR03 302 aa11.93□□□□□ -0.5
GTF3C4-201ENST00000372146 LRCOL1A6NCL2 159 aa11.92□□□□□ -0.5
GTF3C4-201ENST00000372146 GTSF1Q8WW33 167 aa11.92□□□□□ -0.5
GTF3C4-201ENST00000372146 FAM19A3Q7Z5A8 133 aa11.92□□□□□ -0.5
GTF3C4-201ENST00000372146 IGHV1-58A0A0C4DH39 117 aa11.92□□□□□ -0.5
GTF3C4-201ENST00000372146 RBX1P62877 108 aa11.91□□□□□ -0.5
GTF3C4-201ENST00000372146 IGLV3-12A0A075B6K2 115 aa11.91□□□□□ -0.5
GTF3C4-201ENST00000372146 C17orf58Q2M2W7 97 aa11.91□□□□□ -0.5
GTF3C4-201ENST00000372146 ZMAT4Q9H898 229 aa11.91□□□□□ -0.5
GTF3C4-201ENST00000372146 TMEM263Q8WUH6 116 aaKnown RBP11.91□□□□□ -0.5
GTF3C4-201ENST00000372146 B9D2Q9BPU9 175 aa11.9□□□□□ -0.5
GTF3C4-201ENST00000372146 CTSGP08311 255 aa11.9□□□□□ -0.5
GTF3C4-201ENST00000372146 SMIM9A6NGZ8 99 aa11.9□□□□□ -0.5
GTF3C4-201ENST00000372146 COX7CP15954 63 aa11.9□□□□□ -0.5
GTF3C4-201ENST00000372146 ZFAND3Q9H8U3 227 aa11.9□□□□□ -0.5
GTF3C4-201ENST00000372146 C16orf74Q96GX8 76 aa11.9□□□□□ -0.5
GTF3C4-201ENST00000372146 IGHV4-30-4P0DP06 118 aa11.9□□□□□ -0.5
GTF3C4-201ENST00000372146 IGHV4-31P0DP07 118 aa11.9□□□□□ -0.5
GTF3C4-201ENST00000372146 AGPAT4-IT1Q9H0P7 198 aa11.89□□□□□ -0.51
GTF3C4-201ENST00000372146 DEFB112Q30KQ8 113 aa11.89□□□□□ -0.51
GTF3C4-201ENST00000372146 C3orf84H3BNL1 204 aa11.89□□□□□ -0.51
GTF3C4-201ENST00000372146 MSRB1Q9NZV6 116 aa11.89□□□□□ -0.51
GTF3C4-201ENST00000372146 IMUPQ9GZP8 106 aa11.88□□□□□ -0.51
GTF3C4-201ENST00000372146 SLPIP03973 132 aa11.88□□□□□ -0.51
GTF3C4-201ENST00000372146 LY6DQ14210 128 aa11.88□□□□□ -0.51
GTF3C4-201ENST00000372146 CPAMD8Q8IZJ3 1885 aa11.88□□□□□ -0.51
GTF3C4-201ENST00000372146 LENEPQ9Y5L5 61 aa11.87□□□□□ -0.51
GTF3C4-201ENST00000372146 ACANP16112 2415 aa11.87□□□□□ -0.51
GTF3C4-201ENST00000372146 IGHV1-69P01742 117 aa11.87□□□□□ -0.51
GTF3C4-201ENST00000372146 LTBP1Q14766 1721 aa11.87□□□□□ -0.51
GTF3C4-201ENST00000372146 FAM30AQ9NZY2 134 aa11.86□□□□□ -0.51
GTF3C4-201ENST00000372146 APRG1Q8IVJ8 170 aa11.86□□□□□ -0.51
GTF3C4-201ENST00000372146 SMIM26A0A096LP01 95 aa11.86□□□□□ -0.51
GTF3C4-201ENST00000372146 CCDC168Q8NDH2 2452 aa11.86□□□□□ -0.51
GTF3C4-201ENST00000372146 SOSTDC1Q6X4U4 206 aa11.86□□□□□ -0.51
GTF3C4-201ENST00000372146 COLQQ9Y215 455 aaPredicted RBP11.86□□□□□ -0.51
GTF3C4-201ENST00000372146 FLVCR1-AS1Q8TAF5 88 aa11.85□□□□□ -0.51
GTF3C4-201ENST00000372146 HHLA3Q9XRX5 114 aa11.85□□□□□ -0.51
GTF3C4-201ENST00000372146 FAM19A5Q7Z5A7 132 aaPredicted RBP11.85□□□□□ -0.51
GTF3C4-201ENST00000372146 CRIPAKQ8N1N5 446 aa11.85□□□□□ -0.51
GTF3C4-201ENST00000372146 MRPS36P82909 103 aaKnown RBP11.85□□□□□ -0.51
GTF3C4-201ENST00000372146 SPAG11BQ08648 103 aa11.85□□□□□ -0.51
GTF3C4-201ENST00000372146 MSMBP08118 114 aa11.85□□□□□ -0.51
GTF3C4-201ENST00000372146 PSPHP1O15172 72 aa11.85□□□□□ -0.51
GTF3C4-201ENST00000372146 IGHV4-38-2P0DP08 117 aa11.85□□□□□ -0.51
GTF3C4-201ENST00000372146 IGHV4-61A0A0C4DH41 118 aa11.84□□□□□ -0.51
GTF3C4-201ENST00000372146 TRIAP1O43715 76 aa11.84□□□□□ -0.51
GTF3C4-201ENST00000372146 LOXP28300 417 aaPredicted RBP11.84□□□□□ -0.51
GTF3C4-201ENST00000372146 MAPK1IP1LQ8NDC0 245 aa11.84□□□□□ -0.51
GTF3C4-201ENST00000372146 LMO1P25800 156 aa11.84□□□□□ -0.51
GTF3C4-201ENST00000372146 CD59P13987 128 aa11.84□□□□□ -0.51
GTF3C4-201ENST00000372146 GATA3P23771 443 aa11.84□□□□□ -0.51
GTF3C4-201ENST00000372146 C9orf85Q96MD7 179 aa11.84□□□□□ -0.51
GTF3C4-201ENST00000372146 CSDC2Q9Y534 153 aaKnown RBP11.83□□□□□ -0.52
GTF3C4-201ENST00000372146 SP5Q6BEB4 398 aaPredicted RBP11.83□□□□□ -0.52
GTF3C4-201ENST00000372146 SIRPDQ9H106 197 aa11.83□□□□□ -0.52
GTF3C4-201ENST00000372146 DEFB136Q30KP8 78 aa11.82□□□□□ -0.52
GTF3C4-201ENST00000372146 A0A0J9YXY3 114 aa11.82□□□□□ -0.52
GTF3C4-201ENST00000372146 E7EQL1 145 aa11.82□□□□□ -0.52
GTF3C4-201ENST00000372146 DIAPH2-AS1Q14236 149 aa11.82□□□□□ -0.52
GTF3C4-201ENST00000372146 C15orf65H3BRN8 121 aa11.82□□□□□ -0.52
GTF3C4-201ENST00000372146 Q8N9L7 120 aa11.82□□□□□ -0.52
GTF3C4-201ENST00000372146 TP73-AS1Q9UF72 201 aa11.82□□□□□ -0.52
GTF3C4-201ENST00000372146 MRPS12O15235 138 aaKnown RBP11.82□□□□□ -0.52
GTF3C4-201ENST00000372146 GP9P14770 177 aa11.81□□□□□ -0.52
GTF3C4-201ENST00000372146 C1orf158Q8N1D5 194 aa11.81□□□□□ -0.52
GTF3C4-201ENST00000372146 RNF223E7ERA6 249 aa11.81□□□□□ -0.52
GTF3C4-201ENST00000372146 MIFP14174 115 aa11.81□□□□□ -0.52
GTF3C4-201ENST00000372146 CTRLP40313 264 aa11.81□□□□□ -0.52
GTF3C4-201ENST00000372146 WT1P19544 449 aaPredicted RBP11.81□□□□□ -0.52
GTF3C4-201ENST00000372146 PIEZO1Q92508 2521 aa11.81□□□□□ -0.52
GTF3C4-201ENST00000372146 ZNF883P0CG24 379 aa11.8□□□□□ -0.52
GTF3C4-201ENST00000372146 P0DMU3 169 aa11.8□□□□□ -0.52
GTF3C4-201ENST00000372146 FAM231AP0DMU4 169 aa11.8□□□□□ -0.52
GTF3C4-201ENST00000372146 FAM231CP0DMU5 169 aa11.8□□□□□ -0.52
GTF3C4-201ENST00000372146 ESM1Q9NQ30 184 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms