RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 TRBV20-1A0A075B6N2 111 aa11.18□□□□□ -0.62
NDC1-201ENST00000371429 K7EQG2 157 aa11.18□□□□□ -0.62
NDC1-201ENST00000371429 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
NDC1-201ENST00000371429 C10orf99Q6UWK7 81 aa11.18□□□□□ -0.62
NDC1-201ENST00000371429 CRIP3Q6Q6R5 217 aa11.18□□□□□ -0.62
NDC1-201ENST00000371429 GTSF1Q8WW33 167 aa11.18□□□□□ -0.62
NDC1-201ENST00000371429 PLA2G2EQ9NZK7 142 aa11.18□□□□□ -0.62
NDC1-201ENST00000371429 TIRAPP58753 221 aa11.18□□□□□ -0.62
NDC1-201ENST00000371429 GAGE2BQ13066 116 aa11.18□□□□□ -0.62
NDC1-201ENST00000371429 LINC01006Q8NI28 216 aa11.17□□□□□ -0.62
NDC1-201ENST00000371429 ETDCA0A1B0GVM5 59 aa11.17□□□□□ -0.62
NDC1-201ENST00000371429 SIGMAR1Q99720 223 aa11.17□□□□□ -0.62
NDC1-201ENST00000371429 SETD2Q9BYW2 2564 aaPredicted RBP11.16□□□□□ -0.62
NDC1-201ENST00000371429 HILS1P60008 231 aa11.16□□□□□ -0.62
NDC1-201ENST00000371429 MUC22E2RYF6 1773 aaPredicted RBP11.16□□□□□ -0.62
NDC1-201ENST00000371429 RPL39P62891 51 aaKnown RBP11.16□□□□□ -0.62
NDC1-201ENST00000371429 MRPL52Q86TS9 123 aaKnown RBP11.16□□□□□ -0.62
NDC1-201ENST00000371429 FAM222AQ5U5X8 452 aa11.16□□□□□ -0.62
NDC1-201ENST00000371429 PLXNB1O43157 2135 aa11.15□□□□□ -0.62
NDC1-201ENST00000371429 NDUFA1O15239 70 aa11.15□□□□□ -0.62
NDC1-201ENST00000371429 CRYGBP07316 175 aa11.15□□□□□ -0.62
NDC1-201ENST00000371429 CTRLP40313 264 aa11.15□□□□□ -0.62
NDC1-201ENST00000371429 PSMG3-AS1Q96PY0 264 aa11.15□□□□□ -0.62
NDC1-201ENST00000371429 TRBV10-1A0A0K0K1A3 114 aa11.15□□□□□ -0.62
NDC1-201ENST00000371429 SPATA25Q9BR10 227 aa11.15□□□□□ -0.62
NDC1-201ENST00000371429 TRBV6-1A0A0K0K1D8 114 aa11.15□□□□□ -0.63
NDC1-201ENST00000371429 PCP4P48539 62 aa11.15□□□□□ -0.63
NDC1-201ENST00000371429 Q6ZTI0 123 aa11.15□□□□□ -0.63
NDC1-201ENST00000371429 SMIM9A6NGZ8 99 aa11.14□□□□□ -0.63
NDC1-201ENST00000371429 TRAV26-1A0A087WT03 109 aa11.14□□□□□ -0.63
NDC1-201ENST00000371429 LINC00482Q8N8I6 264 aa11.14□□□□□ -0.63
NDC1-201ENST00000371429 KRTAP10-9P60411 292 aa11.14□□□□□ -0.63
NDC1-201ENST00000371429 ZNF702PQ9H963 129 aa11.14□□□□□ -0.63
NDC1-201ENST00000371429 FN1P02751 2386 aaKnown RBP11.13□□□□□ -0.63
NDC1-201ENST00000371429 CEND1Q8N111 149 aa11.13□□□□□ -0.63
NDC1-201ENST00000371429 COX7B2Q8TF08 81 aa11.13□□□□□ -0.63
NDC1-201ENST00000371429 DSCR8Q96T75 97 aa11.13□□□□□ -0.63
NDC1-201ENST00000371429 C11orf1Q9H5F2 150 aa11.13□□□□□ -0.63
NDC1-201ENST00000371429 DLEU1O43261 78 aa11.12□□□□□ -0.63
NDC1-201ENST00000371429 UBE2V1Q13404 147 aa11.12□□□□□ -0.63
NDC1-201ENST00000371429 RBMY1FQ15415 496 aaKnown RBP11.12□□□□□ -0.63
NDC1-201ENST00000371429 DEFB105AQ8NG35 78 aa11.12□□□□□ -0.63
NDC1-201ENST00000371429 SPAG11BQ08648 103 aa11.12□□□□□ -0.63
NDC1-201ENST00000371429 HIST2H2BDQ6DRA6 164 aa11.12□□□□□ -0.63
NDC1-201ENST00000371429 ODF3Q96PU9 254 aa11.12□□□□□ -0.63
NDC1-201ENST00000371429 ANAPC13Q9BS18 74 aa11.12□□□□□ -0.63
NDC1-201ENST00000371429 DEFB131BA0A096LNP1 70 aa11.11□□□□□ -0.63
NDC1-201ENST00000371429 LYRM9A8MSI8 78 aa11.11□□□□□ -0.63
NDC1-201ENST00000371429 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
NDC1-201ENST00000371429 FAM110AQ9BQ89 295 aa11.11□□□□□ -0.63
NDC1-201ENST00000371429 COX11Q9Y6N1 276 aa11.11□□□□□ -0.63
NDC1-201ENST00000371429 ARHGAP21Q5T5U3 1957 aa11.11□□□□□ -0.63
NDC1-201ENST00000371429 IGHV4-4A0A075B6R2 117 aa11.11□□□□□ -0.63
NDC1-201ENST00000371429 UBL5Q9BZL1 73 aa11.11□□□□□ -0.63
NDC1-201ENST00000371429 PSMB8P28062 276 aa11.11□□□□□ -0.63
NDC1-201ENST00000371429 HAMPP81172 84 aa11.11□□□□□ -0.63
NDC1-201ENST00000371429 RNF183Q96D59 192 aa11.11□□□□□ -0.63
NDC1-201ENST00000371429 EIF4EBP1Q13541 118 aaPredicted RBP11.1□□□□□ -0.63
NDC1-201ENST00000371429 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.1□□□□□ -0.63
NDC1-201ENST00000371429 SND1-IT1Q9HBX3 110 aa11.1□□□□□ -0.63
NDC1-201ENST00000371429 CCL25O15444 150 aa11.1□□□□□ -0.63
NDC1-201ENST00000371429 ZNF80P51504 273 aaPredicted RBP11.1□□□□□ -0.63
NDC1-201ENST00000371429 BVES-AS1Q5T3Y7 98 aa11.1□□□□□ -0.63
NDC1-201ENST00000371429 PCP2Q8IVA1 136 aa11.1□□□□□ -0.63
NDC1-201ENST00000371429 TP53TG3Q9ULZ0 132 aa11.1□□□□□ -0.63
NDC1-201ENST00000371429 C9orf118A6NHY6 69 aa11.09□□□□□ -0.63
NDC1-201ENST00000371429 SIVA1O15304 175 aa11.09□□□□□ -0.63
NDC1-201ENST00000371429 ZFAND6Q6FIF0 208 aa11.09□□□□□ -0.63
NDC1-201ENST00000371429 TIMM17AQ99595 171 aa11.09□□□□□ -0.63
NDC1-201ENST00000371429 SMR3AQ99954 134 aa11.09□□□□□ -0.63
NDC1-201ENST00000371429 ZFAND3Q9H8U3 227 aa11.09□□□□□ -0.63
NDC1-201ENST00000371429 ARHGAP32A7KAX9 2087 aa11.09□□□□□ -0.63
NDC1-201ENST00000371429 C19orf71A6NCJ1 209 aa11.09□□□□□ -0.63
NDC1-201ENST00000371429 IFITM1P13164 125 aa11.09□□□□□ -0.63
NDC1-201ENST00000371429 MAJINQ3KP22 176 aa11.09□□□□□ -0.63
NDC1-201ENST00000371429 ZNF124Q15973 351 aa11.08□□□□□ -0.64
NDC1-201ENST00000371429 CARD19Q96LW7 228 aa11.08□□□□□ -0.64
NDC1-201ENST00000371429 Q8N6K4 173 aa11.08□□□□□ -0.64
NDC1-201ENST00000371429 C20orf203Q8NBC4 194 aa11.08□□□□□ -0.64
NDC1-201ENST00000371429 CFC1BP0CG36 223 aa11.08□□□□□ -0.64
NDC1-201ENST00000371429 CFC1P0CG37 223 aa11.08□□□□□ -0.64
NDC1-201ENST00000371429 K7ERJ3 54 aa11.07□□□□□ -0.64
NDC1-201ENST00000371429 CXCL5P42830 114 aa11.07□□□□□ -0.64
NDC1-201ENST00000371429 PTPRSQ13332 1948 aa11.07□□□□□ -0.64
NDC1-201ENST00000371429 AVPP01185 164 aa11.07□□□□□ -0.64
NDC1-201ENST00000371429 MIFP14174 115 aa11.07□□□□□ -0.64
NDC1-201ENST00000371429 LINC00173Q6ZV60 143 aa11.07□□□□□ -0.64
NDC1-201ENST00000371429 C20orf173Q96LM9 149 aa11.06□□□□□ -0.64
NDC1-201ENST00000371429 CENPFP49454 3210 aa11.06□□□□□ -0.64
NDC1-201ENST00000371429 TOMM6Q96B49 74 aa11.06□□□□□ -0.64
NDC1-201ENST00000371429 TINCRA0A1B0GVN0 87 aa11.06□□□□□ -0.64
NDC1-201ENST00000371429 UBE2AP49459 152 aa11.06□□□□□ -0.64
NDC1-201ENST00000371429 MBD6Q96DN6 1003 aa11.06□□□□□ -0.64
NDC1-201ENST00000371429 C12orf74Q32Q52 190 aa11.06□□□□□ -0.64
NDC1-201ENST00000371429 Q6ZS46 218 aa11.05□□□□□ -0.64
NDC1-201ENST00000371429 BAALCQ8WXS3 180 aa11.05□□□□□ -0.64
NDC1-201ENST00000371429 NUP210LQ5VU65 1888 aa11.05□□□□□ -0.64
NDC1-201ENST00000371429 P0DMU3 169 aa11.05□□□□□ -0.64
NDC1-201ENST00000371429 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
NDC1-201ENST00000371429 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms