RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 PLXNB3Q9ULL4 1909 aa13.84□□□□□ -0.19
SNX27-202ENST00000368841 LINC01620Q4KN68 170 aa13.83□□□□□ -0.19
SNX27-202ENST00000368841 Q6ZTI0 123 aa13.83□□□□□ -0.19
SNX27-202ENST00000368841 PKIGQ9Y2B9 76 aa13.83□□□□□ -0.19
SNX27-202ENST00000368841 TRAV23DV6A0A075B6W5 121 aa13.83□□□□□ -0.2
SNX27-202ENST00000368841 FAM19A5Q7Z5A7 132 aaPredicted RBP13.83□□□□□ -0.2
SNX27-202ENST00000368841 FAM167A-AS1Q96KT0 104 aa13.83□□□□□ -0.2
SNX27-202ENST00000368841 IGLV2-14P01704 120 aa13.82□□□□□ -0.2
SNX27-202ENST00000368841 MYCNOSP40205 109 aa13.82□□□□□ -0.2
SNX27-202ENST00000368841 SEC61GP60059 68 aa13.82□□□□□ -0.2
SNX27-202ENST00000368841 MPLKIPQ8TAP9 179 aa13.82□□□□□ -0.2
SNX27-202ENST00000368841 MLST8Q9BVC4 326 aa13.82□□□□□ -0.2
SNX27-202ENST00000368841 EP300Q09472 2414 aaPredicted RBP13.82□□□□□ -0.2
SNX27-202ENST00000368841 A0A087WZ39 114 aa13.82□□□□□ -0.2
SNX27-202ENST00000368841 H0YGX0 51 aa13.82□□□□□ -0.2
SNX27-202ENST00000368841 FAM19A1Q7Z5A9 133 aa13.82□□□□□ -0.2
SNX27-202ENST00000368841 ROS1P08922 2347 aa13.81□□□□□ -0.2
SNX27-202ENST00000368841 FOXI1Q12951 378 aa13.81□□□□□ -0.2
SNX27-202ENST00000368841 SMIM20Q8N5G0 67 aa13.81□□□□□ -0.2
SNX27-202ENST00000368841 ZGRF1Q86YA3 2104 aa13.81□□□□□ -0.2
SNX27-202ENST00000368841 CRYGDP07320 174 aa13.81□□□□□ -0.2
SNX27-202ENST00000368841 LOXL1Q08397 574 aaPredicted RBP13.81□□□□□ -0.2
SNX27-202ENST00000368841 COL4A3Q01955 1670 aa13.81□□□□□ -0.2
SNX27-202ENST00000368841 COX7BP24311 80 aa13.81□□□□□ -0.2
SNX27-202ENST00000368841 KRTAP27-1Q3LI81 207 aa13.81□□□□□ -0.2
SNX27-202ENST00000368841 TNRC6AQ8NDV7 1962 aaKnown RBP13.8□□□□□ -0.2
SNX27-202ENST00000368841 LINC01545Q5VT33 79 aa13.8□□□□□ -0.2
SNX27-202ENST00000368841 LYPD6Q86Y78 171 aa13.8□□□□□ -0.2
SNX27-202ENST00000368841 MSMPQ1L6U9 139 aa13.8□□□□□ -0.2
SNX27-202ENST00000368841 IGKV1D-37A0A075B6S9 117 aa13.8□□□□□ -0.2
SNX27-202ENST00000368841 TRBV6-1A0A0K0K1D8 114 aa13.8□□□□□ -0.2
SNX27-202ENST00000368841 IGFL2Q6UWQ7 119 aa13.8□□□□□ -0.2
SNX27-202ENST00000368841 SPTSSBQ8NFR3 76 aa13.79□□□□□ -0.2
SNX27-202ENST00000368841 WFDC10BQ8IUB3 73 aa13.79□□□□□ -0.2
SNX27-202ENST00000368841 CNOT1A5YKK6 2376 aaKnown RBP13.78□□□□□ -0.2
SNX27-202ENST00000368841 IGF1P05019 195 aa13.78□□□□□ -0.2
SNX27-202ENST00000368841 REG3AQ06141 175 aa13.78□□□□□ -0.2
SNX27-202ENST00000368841 ZNF80P51504 273 aaPredicted RBP13.78□□□□□ -0.2
SNX27-202ENST00000368841 FAM222AQ5U5X8 452 aa13.78□□□□□ -0.2
SNX27-202ENST00000368841 IL15RAQ13261 267 aa13.78□□□□□ -0.2
SNX27-202ENST00000368841 BRK1Q8WUW1 75 aa13.78□□□□□ -0.2
SNX27-202ENST00000368841 CASC2Q6XLA1 102 aa13.77□□□□□ -0.2
SNX27-202ENST00000368841 C20orf173Q96LM9 149 aa13.77□□□□□ -0.2
SNX27-202ENST00000368841 C10orf99Q6UWK7 81 aa13.77□□□□□ -0.21
SNX27-202ENST00000368841 CCDC140Q96MF4 163 aa13.77□□□□□ -0.21
SNX27-202ENST00000368841 IGHV1-58A0A0C4DH39 117 aa13.76□□□□□ -0.21
SNX27-202ENST00000368841 PROK1P58294 105 aa13.76□□□□□ -0.21
SNX27-202ENST00000368841 TP73-AS1Q9UF72 201 aa13.76□□□□□ -0.21
SNX27-202ENST00000368841 LINC00467Q9BRT7 94 aa13.76□□□□□ -0.21
SNX27-202ENST00000368841 A6NDX4 124 aa13.76□□□□□ -0.21
SNX27-202ENST00000368841 UPK3BQ9BT76 320 aa13.76□□□□□ -0.21
SNX27-202ENST00000368841 PPDPFQ9H3Y8 114 aa13.76□□□□□ -0.21
SNX27-202ENST00000368841 PRO0255Q9UI72 69 aa13.75□□□□□ -0.21
SNX27-202ENST00000368841 A0A0J9YX75 114 aa13.75□□□□□ -0.21
SNX27-202ENST00000368841 LINC00526Q96FQ7 95 aa13.75□□□□□ -0.21
SNX27-202ENST00000368841 TMEM131Q92545 1883 aa13.75□□□□□ -0.21
SNX27-202ENST00000368841 TRBV10-2A0A0K0K1G8 114 aa13.75□□□□□ -0.21
SNX27-202ENST00000368841 E9PLD3 99 aa13.75□□□□□ -0.21
SNX27-202ENST00000368841 SDIM1Q6ZPB5 146 aa13.74□□□□□ -0.21
SNX27-202ENST00000368841 MED13Q9UHV7 2174 aa13.74□□□□□ -0.21
SNX27-202ENST00000368841 ZFAND2AQ8N6M9 145 aa13.74□□□□□ -0.21
SNX27-202ENST00000368841 GVINP1Q7Z2Y8 2422 aa13.74□□□□□ -0.21
SNX27-202ENST00000368841 DEFB131BA0A096LNP1 70 aa13.74□□□□□ -0.21
SNX27-202ENST00000368841 ODF1Q14990 250 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 KIR2DL5BA0A0G2JN68 375 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 KIR2DL5BA0A0G2JPC4 375 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 ATOX1O00244 68 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 IGHV4-31P0DP07 118 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 KIR2DL5AQ8N109 375 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 ACACAQ13085 2346 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 C2orf16Q68DN1 1984 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 TANC2Q9HCD6 1990 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 TMEM256-PLSCR3K7ERE1 68 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 ABCA1O95477 2261 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 TCL1BO95988 128 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 CHCHD10Q8WYQ3 142 aaPredicted RBP13.73□□□□□ -0.21
SNX27-202ENST00000368841 Q8NA96 180 aa13.73□□□□□ -0.21
SNX27-202ENST00000368841 NCOR1O75376 2440 aa13.72□□□□□ -0.21
SNX27-202ENST00000368841 K7EMT4 169 aa13.72□□□□□ -0.21
SNX27-202ENST00000368841 XAGE1AQ9HD64 81 aa13.72□□□□□ -0.21
SNX27-202ENST00000368841 TAX1BP3O14907 124 aa13.72□□□□□ -0.21
SNX27-202ENST00000368841 GDF5OSQ5U4N7 250 aa13.71□□□□□ -0.21
SNX27-202ENST00000368841 KIAA1549LQ6ZVL6 1849 aa13.71□□□□□ -0.21
SNX27-202ENST00000368841 PRM2P04554 102 aa13.71□□□□□ -0.21
SNX27-202ENST00000368841 SPINK6Q6UWN8 80 aa13.71□□□□□ -0.21
SNX27-202ENST00000368841 LINC00322Q6ZN03 302 aaPredicted RBP13.71□□□□□ -0.21
SNX27-202ENST00000368841 Q8NFD4 153 aa13.71□□□□□ -0.21
SNX27-202ENST00000368841 IGKV2-28A0A075B6P5 120 aa13.7□□□□□ -0.22
SNX27-202ENST00000368841 IGKV2D-28P01615 120 aa13.7□□□□□ -0.22
SNX27-202ENST00000368841 IGHV4-30-4P0DP06 118 aa13.7□□□□□ -0.22
SNX27-202ENST00000368841 PIK3CD-AS1Q5SR53 167 aa13.7□□□□□ -0.22
SNX27-202ENST00000368841 CTRLP40313 264 aa13.7□□□□□ -0.22
SNX27-202ENST00000368841 TEN1Q86WV5 123 aa13.7□□□□□ -0.22
SNX27-202ENST00000368841 NDUFA11Q86Y39 141 aa13.7□□□□□ -0.22
SNX27-202ENST00000368841 DSCAML1Q8TD84 2053 aa13.7□□□□□ -0.22
SNX27-202ENST00000368841 CXCL5P42830 114 aa13.7□□□□□ -0.22
SNX27-202ENST00000368841 TRBV10-1A0A0K0K1A3 114 aa13.69□□□□□ -0.22
SNX27-202ENST00000368841 IGLV1-47P01700 117 aa13.69□□□□□ -0.22
SNX27-202ENST00000368841 C18orf65Q6ZTR6 163 aa13.69□□□□□ -0.22
SNX27-202ENST00000368841 DAZAP2Q15038 168 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms