RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 RHOHQ15669 191 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 C19orf54Q5BKX5 351 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 Q8N1Y9 231 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 SS18L2Q9UHA2 77 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 CELSR2Q9HCU4 2923 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 ARL3P36405 182 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 NSUN5P1Q3KNT7 163 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 LINC01620Q4KN68 170 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 RAX2Q96IS3 184 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 BPESC1Q9GZL8 116 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 MAP1AP78559 2803 aaPredicted RBP13.02□□□□□ -0.32
CHTOP-203ENST00000368690 TRBV30A0A0K0K1B3 111 aa13.02□□□□□ -0.33
CHTOP-203ENST00000368690 PLA2G2AP14555 144 aa13.02□□□□□ -0.33
CHTOP-203ENST00000368690 TRPT1Q86TN4 253 aaKnown RBP13.02□□□□□ -0.33
CHTOP-203ENST00000368690 USP9YO00507 2555 aaPredicted RBP13.02□□□□□ -0.33
CHTOP-203ENST00000368690 MUC4Q99102 2169 aa13.02□□□□□ -0.33
CHTOP-203ENST00000368690 ZFP36P26651 326 aaKnown RBP13.01□□□□□ -0.33
CHTOP-203ENST00000368690 ATP5J2P56134 94 aa13.01□□□□□ -0.33
CHTOP-203ENST00000368690 C5orf56Q8N8D9 126 aa13.01□□□□□ -0.33
CHTOP-203ENST00000368690 TRBV10-2A0A0K0K1G8 114 aa13.01□□□□□ -0.33
CHTOP-203ENST00000368690 KLLNB2CW77 178 aa13.01□□□□□ -0.33
CHTOP-203ENST00000368690 J3QKU1 62 aa13.01□□□□□ -0.33
CHTOP-203ENST00000368690 M0R2P5 195 aa13.01□□□□□ -0.33
CHTOP-203ENST00000368690 IFITM1P13164 125 aa13.01□□□□□ -0.33
CHTOP-203ENST00000368690 MRPL23Q16540 153 aaKnown RBP13.01□□□□□ -0.33
CHTOP-203ENST00000368690 NTN5Q8WTR8 489 aaPredicted RBP13.01□□□□□ -0.33
CHTOP-203ENST00000368690 GAGE12JA6NER3 117 aa13□□□□□ -0.33
CHTOP-203ENST00000368690 GAGE7O76087 117 aa13□□□□□ -0.33
CHTOP-203ENST00000368690 GAGE12FP0CL80 117 aa13□□□□□ -0.33
CHTOP-203ENST00000368690 GAGE12GP0CL81 117 aa13□□□□□ -0.33
CHTOP-203ENST00000368690 GAGE12IP0CL82 117 aa13□□□□□ -0.33
CHTOP-203ENST00000368690 GAGE4Q13068 117 aa13□□□□□ -0.33
CHTOP-203ENST00000368690 MDFICQ9P1T7 246 aa13□□□□□ -0.33
CHTOP-203ENST00000368690 B5MCH6 92 aa13□□□□□ -0.33
CHTOP-203ENST00000368690 MUSTN1Q8IVN3 82 aa13□□□□□ -0.33
CHTOP-203ENST00000368690 TRAV41A0A0B4J266 112 aa12.99□□□□□ -0.33
CHTOP-203ENST00000368690 TRAV4A0A0B4J268 109 aa12.99□□□□□ -0.33
CHTOP-203ENST00000368690 TTC32Q5I0X7 151 aa12.99□□□□□ -0.33
CHTOP-203ENST00000368690 TRAV8-4A0A0B4J246 113 aa12.98□□□□□ -0.33
CHTOP-203ENST00000368690 TRAV2A0A0B4J234 112 aa12.98□□□□□ -0.33
CHTOP-203ENST00000368690 BRI3O95415 125 aa12.98□□□□□ -0.33
CHTOP-203ENST00000368690 SAA4P35542 130 aa12.98□□□□□ -0.33
CHTOP-203ENST00000368690 FAM159AQ6UWV7 190 aa12.98□□□□□ -0.33
CHTOP-203ENST00000368690 MED13LQ71F56 2210 aa12.98□□□□□ -0.33
CHTOP-203ENST00000368690 FBN2P35556 2912 aa12.97□□□□□ -0.33
CHTOP-203ENST00000368690 ZNF22P17026 224 aaPredicted RBP12.97□□□□□ -0.33
CHTOP-203ENST00000368690 UNQ9165/PRO28630Q6UXU0 137 aa12.97□□□□□ -0.33
CHTOP-203ENST00000368690 ODF3Q96PU9 254 aa12.97□□□□□ -0.33
CHTOP-203ENST00000368690 DOPEY2Q9Y3R5 2298 aa12.97□□□□□ -0.33
CHTOP-203ENST00000368690 PIMREGQ9BSJ6 248 aa12.97□□□□□ -0.33
CHTOP-203ENST00000368690 SVEP1Q4LDE5 3571 aa12.97□□□□□ -0.33
CHTOP-203ENST00000368690 POLQO75417 2590 aa12.96□□□□□ -0.33
CHTOP-203ENST00000368690 F5H697 171 aa12.96□□□□□ -0.33
CHTOP-203ENST00000368690 CRLF1O75462 422 aa12.96□□□□□ -0.33
CHTOP-203ENST00000368690 H3BMM0 161 aa12.96□□□□□ -0.34
CHTOP-203ENST00000368690 Q1RN00 199 aa12.96□□□□□ -0.34
CHTOP-203ENST00000368690 UBE2WQ96B02 151 aa12.96□□□□□ -0.34
CHTOP-203ENST00000368690 HELZ2Q9BYK8 2649 aaKnown RBP12.95□□□□□ -0.34
CHTOP-203ENST00000368690 FAM240AA0A1B0GVK7 77 aa12.95□□□□□ -0.34
CHTOP-203ENST00000368690 H3BT86 120 aa12.95□□□□□ -0.34
CHTOP-203ENST00000368690 JPT2Q9H910 190 aa12.95□□□□□ -0.34
CHTOP-203ENST00000368690 MOB4Q9Y3A3 225 aa12.95□□□□□ -0.34
CHTOP-203ENST00000368690 A0A0J9YXY3 114 aa12.94□□□□□ -0.34
CHTOP-203ENST00000368690 DEFB1P60022 68 aa12.94□□□□□ -0.34
CHTOP-203ENST00000368690 C9orf85Q96MD7 179 aa12.94□□□□□ -0.34
CHTOP-203ENST00000368690 ABCA12Q86UK0 2595 aa12.94□□□□□ -0.34
CHTOP-203ENST00000368690 ANKRD17O75179 2603 aaKnown RBP12.94□□□□□ -0.34
CHTOP-203ENST00000368690 A0A087WWL8 130 aa12.94□□□□□ -0.34
CHTOP-203ENST00000368690 F6UB75 175 aa12.94□□□□□ -0.34
CHTOP-203ENST00000368690 H3BUA1 57 aa12.94□□□□□ -0.34
CHTOP-203ENST00000368690 M0QY20 66 aa12.94□□□□□ -0.34
CHTOP-203ENST00000368690 ELANEP08246 267 aa12.94□□□□□ -0.34
CHTOP-203ENST00000368690 C20orf203Q8NBC4 194 aa12.94□□□□□ -0.34
CHTOP-203ENST00000368690 USMG5Q96IX5 58 aa12.94□□□□□ -0.34
CHTOP-203ENST00000368690 NPFFO15130 113 aa12.93□□□□□ -0.34
CHTOP-203ENST00000368690 TRIAP1O43715 76 aa12.93□□□□□ -0.34
CHTOP-203ENST00000368690 PTPN13Q12923 2485 aa12.93□□□□□ -0.34
CHTOP-203ENST00000368690 TEX49A0A1B0GTD5 131 aa12.93□□□□□ -0.34
CHTOP-203ENST00000368690 H7C2G1 150 aa12.93□□□□□ -0.34
CHTOP-203ENST00000368690 KRTAP10-9P60411 292 aa12.93□□□□□ -0.34
CHTOP-203ENST00000368690 DEFB121Q5J5C9 76 aa12.93□□□□□ -0.34
CHTOP-203ENST00000368690 C15orf53Q8NAA6 179 aa12.93□□□□□ -0.34
CHTOP-203ENST00000368690 SPANXDQ9BXN6 97 aa12.93□□□□□ -0.34
CHTOP-203ENST00000368690 SPANXCQ9NY87 97 aa12.93□□□□□ -0.34
CHTOP-203ENST00000368690 C10orf105Q8TEF2 133 aa12.92□□□□□ -0.34
CHTOP-203ENST00000368690 LITAFQ99732 161 aa12.92□□□□□ -0.34
CHTOP-203ENST00000368690 IGHV4-30-2A0A087WSY4 118 aa12.91□□□□□ -0.34
CHTOP-203ENST00000368690 LMO4P61968 165 aa12.91□□□□□ -0.34
CHTOP-203ENST00000368690 ZNF256Q9Y2P7 627 aaPredicted RBP12.91□□□□□ -0.34
CHTOP-203ENST00000368690 CCDC179H3BU77 68 aa12.91□□□□□ -0.34
CHTOP-203ENST00000368690 TRBV12-3P01733 135 aa12.91□□□□□ -0.34
CHTOP-203ENST00000368690 RPL11P62913 178 aaKnown RBP12.91□□□□□ -0.34
CHTOP-203ENST00000368690 HIST2H2BCQ6DN03 193 aa12.91□□□□□ -0.34
CHTOP-203ENST00000368690 FAM110AQ9BQ89 295 aa12.91□□□□□ -0.34
CHTOP-203ENST00000368690 IGLV4-3A0A075B6K6 122 aa12.9□□□□□ -0.34
CHTOP-203ENST00000368690 IGHV3-16A0A0C4DH30 117 aa12.9□□□□□ -0.34
CHTOP-203ENST00000368690 IGHV4-61A0A0C4DH41 118 aa12.9□□□□□ -0.34
CHTOP-203ENST00000368690 COX6CP09669 75 aa12.9□□□□□ -0.34
CHTOP-203ENST00000368690 C2orf82Q6UX34 121 aa12.9□□□□□ -0.34
CHTOP-203ENST00000368690 PYGO1Q9Y3Y4 419 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms