RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 C11orf53Q8IXP5 236 aa6.94□□□□□ -1.3
CALD1-201ENST00000361675 C14orf178Q8N769 122 aaPredicted RBP6.94□□□□□ -1.3
CALD1-201ENST00000361675 CNEP1R1Q8N9A8 125 aa6.94□□□□□ -1.3
CALD1-201ENST00000361675 CYSTM1Q9H1C7 97 aa6.94□□□□□ -1.3
CALD1-201ENST00000361675 RNF7Q9UBF6 113 aa6.94□□□□□ -1.3
CALD1-201ENST00000361675 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
CALD1-201ENST00000361675 F5H697 171 aa6.93□□□□□ -1.3
CALD1-201ENST00000361675 DEFB109BQ30KR1 87 aa6.93□□□□□ -1.3
CALD1-201ENST00000361675 ZNF672Q499Z4 452 aaPredicted RBP6.93□□□□□ -1.3
CALD1-201ENST00000361675 ZNF625Q96I27 306 aaPredicted RBP6.93□□□□□ -1.3
CALD1-201ENST00000361675 IQCF6A8MYZ5 107 aa6.93□□□□□ -1.3
CALD1-201ENST00000361675 TRGV3P03979 118 aa6.93□□□□□ -1.3
CALD1-201ENST00000361675 PRB1P04280 392 aa6.93□□□□□ -1.3
CALD1-201ENST00000361675 LINC00643Q86TS7 51 aa6.93□□□□□ -1.3
CALD1-201ENST00000361675 DNAL4O96015 105 aa6.93□□□□□ -1.3
CALD1-201ENST00000361675 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
CALD1-201ENST00000361675 ZNF843Q8N446 348 aa6.93□□□□□ -1.3
CALD1-201ENST00000361675 E7EUB6 86 aa6.92□□□□□ -1.3
CALD1-201ENST00000361675 H7C423 109 aa6.92□□□□□ -1.3
CALD1-201ENST00000361675 MSMPQ1L6U9 139 aa6.92□□□□□ -1.3
CALD1-201ENST00000361675 SPTSSBQ8NFR3 76 aa6.92□□□□□ -1.3
CALD1-201ENST00000361675 DPH3P1Q9H4G8 78 aa6.92□□□□□ -1.3
CALD1-201ENST00000361675 C11orf86A6NJI1 115 aa6.92□□□□□ -1.3
CALD1-201ENST00000361675 REG3AQ06141 175 aa6.92□□□□□ -1.3
CALD1-201ENST00000361675 Q6ZSV7 163 aa6.92□□□□□ -1.3
CALD1-201ENST00000361675 SBSPONQ8IVN8 264 aa6.92□□□□□ -1.3
CALD1-201ENST00000361675 ASH1LQ9NR48 2969 aaKnown RBP6.92□□□□□ -1.3
CALD1-201ENST00000361675 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
CALD1-201ENST00000361675 WT1-ASQ06250 92 aa6.91□□□□□ -1.3
CALD1-201ENST00000361675 SOSTDC1Q6X4U4 206 aa6.91□□□□□ -1.3
CALD1-201ENST00000361675 C22orf34Q6ZV56 151 aa6.91□□□□□ -1.3
CALD1-201ENST00000361675 CD177Q8N6Q3 437 aa6.91□□□□□ -1.3
CALD1-201ENST00000361675 DCANP1Q8TF63 244 aa6.91□□□□□ -1.3
CALD1-201ENST00000361675 IGHV3OR16-13A0A075B7E8 117 aa6.91□□□□□ -1.3
CALD1-201ENST00000361675 IGHV3-74A0A0B4J1X5 117 aa6.91□□□□□ -1.3
CALD1-201ENST00000361675 TRBV7-7A0A0K0K1E9 115 aa6.91□□□□□ -1.3
CALD1-201ENST00000361675 C8orf87E5RJ46 101 aa6.91□□□□□ -1.3
CALD1-201ENST00000361675 ACACAQ13085 2346 aa6.91□□□□□ -1.3
CALD1-201ENST00000361675 GHRHP01286 108 aa6.91□□□□□ -1.3
CALD1-201ENST00000361675 C1orf229Q6ZS94 237 aaPredicted RBP6.91□□□□□ -1.3
CALD1-201ENST00000361675 UBE2L6O14933 153 aa6.9□□□□□ -1.3
CALD1-201ENST00000361675 IGHV3-30P01768 117 aa6.9□□□□□ -1.3
CALD1-201ENST00000361675 IGHG3P01860 377 aa6.9□□□□□ -1.3
CALD1-201ENST00000361675 IGHV3-30-5P0DP03 117 aa6.9□□□□□ -1.3
CALD1-201ENST00000361675 CRYGAP11844 174 aa6.9□□□□□ -1.3
CALD1-201ENST00000361675 EIF4EBP1Q13541 118 aaPredicted RBP6.9□□□□□ -1.3
CALD1-201ENST00000361675 M0R1W7 72 aa6.9□□□□□ -1.3
CALD1-201ENST00000361675 FAM223AQ8IWN6 122 aa6.9□□□□□ -1.3
CALD1-201ENST00000361675 KLF14Q8TD94 323 aaPredicted RBP6.9□□□□□ -1.3
CALD1-201ENST00000361675 ICOSQ9Y6W8 199 aa6.9□□□□□ -1.3
CALD1-201ENST00000361675 FAM19A3Q7Z5A8 133 aa6.9□□□□□ -1.31
CALD1-201ENST00000361675 TMEM256-PLSCR3K7ERE1 68 aa6.89□□□□□ -1.31
CALD1-201ENST00000361675 RBMY1FQ15415 496 aaKnown RBP6.89□□□□□ -1.31
CALD1-201ENST00000361675 POM121L12Q8N7R1 296 aa6.89□□□□□ -1.31
CALD1-201ENST00000361675 U3KQK5 164 aa6.89□□□□□ -1.31
CALD1-201ENST00000361675 IGLV2-11P01706 119 aa6.89□□□□□ -1.31
CALD1-201ENST00000361675 SERP1Q9Y6X1 66 aa6.89□□□□□ -1.31
CALD1-201ENST00000361675 A0A0B4J2C4 111 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 RPL27AP46776 148 aaKnown RBP6.88□□□□□ -1.31
CALD1-201ENST00000361675 PRSS33Q8NF86 280 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 RNF185Q96GF1 192 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 TLN1Q9Y490 2541 aaKnown RBP6.88□□□□□ -1.31
CALD1-201ENST00000361675 COL12A1Q99715 3063 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 TRBV19A0A075B6N1 114 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 IGKV1D-37A0A075B6S9 117 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 IGKV3D-20A0A0C4DH25 116 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 DAND5Q8N907 189 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 SMIM2Q9BVW6 85 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 IMUPQ9GZP8 106 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 IGKV3-15P01624 115 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 SERP2Q8N6R1 65 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 RPL39LQ96EH5 51 aaKnown RBP6.88□□□□□ -1.31
CALD1-201ENST00000361675 LAMTOR3Q9UHA4 124 aa6.88□□□□□ -1.31
CALD1-201ENST00000361675 TRAV23DV6A0A075B6W5 121 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 IGHV3-66A0A0C4DH42 116 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 AVPP01185 164 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 ZNF80P51504 273 aaPredicted RBP6.87□□□□□ -1.31
CALD1-201ENST00000361675 CCL8P80075 99 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 SLC25A29Q8N8R3 303 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 RITA1Q96K30 269 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 IGHV1-18A0A0C4DH31 117 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 IGHV3-23P01764 117 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 CXCL5P42830 114 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 RPL18AQ02543 176 aaKnown RBP6.87□□□□□ -1.31
CALD1-201ENST00000361675 EBI3Q14213 229 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 IGF2RP11717 2491 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 DYNLRB1Q9NP97 96 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 FAM215AQ9Y5M1 114 aa6.87□□□□□ -1.31
CALD1-201ENST00000361675 ACYP1P07311 99 aa6.86□□□□□ -1.31
CALD1-201ENST00000361675 TSPEAR-AS2P59090 65 aa6.86□□□□□ -1.31
CALD1-201ENST00000361675 SUMO2P61956 95 aaKnown RBP6.86□□□□□ -1.31
CALD1-201ENST00000361675 SMCR5Q8TEV8 140 aa6.86□□□□□ -1.31
CALD1-201ENST00000361675 ZNF71Q9NQZ8 489 aaPredicted RBP6.86□□□□□ -1.31
CALD1-201ENST00000361675 LINC00474Q9P2X8 69 aa6.86□□□□□ -1.31
CALD1-201ENST00000361675 SLC25A15Q9Y619 301 aa6.86□□□□□ -1.31
CALD1-201ENST00000361675 IGHV3-49A0A0A0MS15 119 aa6.86□□□□□ -1.31
CALD1-201ENST00000361675 RPL39P62891 51 aaKnown RBP6.86□□□□□ -1.31
CALD1-201ENST00000361675 SPANXDQ9BXN6 97 aa6.86□□□□□ -1.31
CALD1-201ENST00000361675 RNASE1P07998 156 aaKnown RBP6.86□□□□□ -1.31
CALD1-201ENST00000361675 ZNF706Q9Y5V0 76 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms