RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TRAV8-4A0A0B4J246 113 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 TSPEAR-AS2P59090 65 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 C10orf99Q6UWK7 81 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 NFE4Q86UQ8 179 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 SS18L2Q9UHA2 77 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 SPENQ96T58 3664 aaKnown RBP4.94□□□□□ -1.62
CSDE1-203ENST00000358528 XGP55808 180 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 CFAP126Q5VTH2 177 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 C11orf71Q6IPW1 123 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 Q6ZUT4 128 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 LINC01587Q99440 93 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 DCHS2Q6V1P9 2916 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 IGHV1OR15-1A0A075B7D0 117 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 B5MCH6 92 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 TMEM262E9PQX1 116 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 M0R2P5 195 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 UCNP55089 124 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 ZNF575Q86XF7 245 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 DYNLRB2Q8TF09 96 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 RNF183Q96D59 192 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 SVEP1Q4LDE5 3571 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-203ENST00000358528 IGKV2-29A2NJV5 120 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-203ENST00000358528 A8MZ25 164 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 IGHV3-53P01767 116 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 SCGB1A1P11684 91 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 DEFB131AP59861 70 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 ATXN8Q156A1 80 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 HIST2H2BDQ6DRA6 164 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 ZNRF2Q8NHG8 242 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 PSMG3-AS1Q96PY0 264 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 ZNF580Q9UK33 172 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 I3L3M4 83 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 NDUFA12Q9UI09 145 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 NAV2Q8IVL1 2488 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 ZFYVE26Q68DK2 2539 aa4.93□□□□□ -1.62
CSDE1-203ENST00000358528 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-203ENST00000358528 DEFB136Q30KP8 78 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 NRGNQ92686 78 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 SPATA25Q9BR10 227 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 PRRC2AP48634 2157 aaKnown RBP4.92□□□□□ -1.62
CSDE1-203ENST00000358528 CRIP2P52943 208 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-203ENST00000358528 PROK1P58294 105 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 TOMM7Q9P0U1 55 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 IGHV4-4A0A075B6R2 117 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 IGHV4-59P01825 116 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 FBXL19-AS1Q494R0 122 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 GPHB5Q86YW7 130 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 C3orf56Q8N813 242 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 JMJD1CQ15652 2540 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 TRAV13-1A0A0B4J241 112 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 C19orf84I3L1E1 186 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 SMCPP49901 116 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-203ENST00000358528 SLC25A29Q8N8R3 303 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 UBE2E2Q96LR5 201 aa4.92□□□□□ -1.62
CSDE1-203ENST00000358528 MUC4Q99102 2169 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 TEX49A0A1B0GTD5 131 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 A0A1W2PRX2 142 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 IGHV3-30P01768 117 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 CRYGDP07320 174 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 IGHV3-30-5P0DP03 117 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 CIRBPQ14011 172 aaKnown RBP4.91□□□□□ -1.62
CSDE1-203ENST00000358528 CLEC2BQ92478 149 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 FN1P02751 2386 aaKnown RBP4.91□□□□□ -1.62
CSDE1-203ENST00000358528 ABCA12Q86UK0 2595 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 IGLV4-69A0A075B6H9 119 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 IGHV4-30-2A0A087WSY4 118 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 H3BMM0 161 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 LEPROTO15243 131 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 TSHBP01222 138 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 UBE2WQ96B02 151 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 PRO0461Q9UI25 63 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 U3KQE9 123 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 TRGV11A0A075B6L2 103 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 RHODO00212 210 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 UBE2D1P51668 147 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 Q6ZSV7 163 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 C15orf53Q8NAA6 179 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 TIMM17AQ99595 171 aa4.91□□□□□ -1.62
CSDE1-203ENST00000358528 IGIPA6NJ69 53 aa4.9□□□□□ -1.62
CSDE1-203ENST00000358528 IGHV3-30-3P0DP02 117 aa4.9□□□□□ -1.62
CSDE1-203ENST00000358528 POLR2KP53803 58 aaKnown RBP4.9□□□□□ -1.62
CSDE1-203ENST00000358528 LINC01620Q4KN68 170 aa4.9□□□□□ -1.62
CSDE1-203ENST00000358528 LRRK2Q5S007 2527 aa4.9□□□□□ -1.62
CSDE1-203ENST00000358528 ABCA2Q9BZC7 2435 aa4.9□□□□□ -1.62
CSDE1-203ENST00000358528 MSMBP08118 114 aa4.9□□□□□ -1.63
CSDE1-203ENST00000358528 ZNF22P17026 224 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-203ENST00000358528 TCTEX1D4Q5JR98 221 aa4.9□□□□□ -1.63
CSDE1-203ENST00000358528 CARD19Q96LW7 228 aa4.9□□□□□ -1.63
CSDE1-203ENST00000358528 LINC01546A6NGU7 62 aa4.9□□□□□ -1.63
CSDE1-203ENST00000358528 C20orf203Q8NBC4 194 aa4.9□□□□□ -1.63
CSDE1-203ENST00000358528 XCL2Q9UBD3 114 aa4.9□□□□□ -1.63
CSDE1-203ENST00000358528 IGHG2P01859 326 aa4.89□□□□□ -1.63
CSDE1-203ENST00000358528 DEFB112Q30KQ8 113 aa4.89□□□□□ -1.63
CSDE1-203ENST00000358528 CDIP1Q9H305 208 aa4.89□□□□□ -1.63
CSDE1-203ENST00000358528 A0A0J9YXY3 114 aa4.89□□□□□ -1.63
CSDE1-203ENST00000358528 PRSS47A8MTI9 375 aa4.89□□□□□ -1.63
CSDE1-203ENST00000358528 IGHV3-33P01772 117 aa4.89□□□□□ -1.63
CSDE1-203ENST00000358528 ATP6V0E2Q8NHE4 81 aa4.89□□□□□ -1.63
CSDE1-203ENST00000358528 TRGV1A0A0A0MS02 117 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms