RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 CTRLP40313 264 aa13.54□□□□□ -0.24
HCFC1R1-202ENST00000354679 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.54□□□□□ -0.24
HCFC1R1-202ENST00000354679 PGPEP1Q9NXJ5 209 aa13.54□□□□□ -0.24
HCFC1R1-202ENST00000354679 URGCP-MRPS24S4R325 110 aa13.54□□□□□ -0.24
HCFC1R1-202ENST00000354679 TRGC1P0CF51 173 aa13.53□□□□□ -0.24
HCFC1R1-202ENST00000354679 NTF3P20783 257 aa13.53□□□□□ -0.24
HCFC1R1-202ENST00000354679 WDR73Q6P4I2 378 aa13.53□□□□□ -0.24
HCFC1R1-202ENST00000354679 CDK2AP2O75956 126 aa13.52□□□□□ -0.25
HCFC1R1-202ENST00000354679 FUSP35637 526 aaKnown RBP eCLIP13.52□□□□□ -0.25
HCFC1R1-202ENST00000354679 SUMO4Q6EEV6 95 aa13.52□□□□□ -0.25
HCFC1R1-202ENST00000354679 CDPF1Q6NVV7 123 aa13.52□□□□□ -0.25
HCFC1R1-202ENST00000354679 SMIM7Q9BQ49 75 aa13.52□□□□□ -0.25
HCFC1R1-202ENST00000354679 TRBV6-8A0A0A6YYG3 113 aa13.51□□□□□ -0.25
HCFC1R1-202ENST00000354679 TRAV8-3A0A0A6YYJ7 113 aa13.51□□□□□ -0.25
HCFC1R1-202ENST00000354679 H7C1H1 209 aa13.51□□□□□ -0.25
HCFC1R1-202ENST00000354679 M0QY20 66 aa13.51□□□□□ -0.25
HCFC1R1-202ENST00000354679 GATCO43716 136 aaKnown RBP13.51□□□□□ -0.25
HCFC1R1-202ENST00000354679 KCNIP4Q6PIL6 250 aa13.51□□□□□ -0.25
HCFC1R1-202ENST00000354679 FAM231DQ6ZW35 169 aa13.51□□□□□ -0.25
HCFC1R1-202ENST00000354679 CHCHD7Q9BUK0 85 aa13.51□□□□□ -0.25
HCFC1R1-202ENST00000354679 TM2D2Q9BX73 214 aa13.51□□□□□ -0.25
HCFC1R1-202ENST00000354679 CNFNQ9BYD5 112 aa13.51□□□□□ -0.25
HCFC1R1-202ENST00000354679 DPH3P1Q9H4G8 78 aa13.51□□□□□ -0.25
HCFC1R1-202ENST00000354679 A0A087WX48 190 aa13.5□□□□□ -0.25
HCFC1R1-202ENST00000354679 LRCOL1A6NCL2 159 aa13.5□□□□□ -0.25
HCFC1R1-202ENST00000354679 SRP19P09132 144 aaKnown RBP13.5□□□□□ -0.25
HCFC1R1-202ENST00000354679 TWIST1Q15672 202 aa13.49□□□□□ -0.25
HCFC1R1-202ENST00000354679 GTSF1Q8WW33 167 aa13.49□□□□□ -0.25
HCFC1R1-202ENST00000354679 DNAJC30Q96LL9 226 aa13.49□□□□□ -0.25
HCFC1R1-202ENST00000354679 ZNF727A8MUV8 499 aa13.48□□□□□ -0.25
HCFC1R1-202ENST00000354679 TMEM97Q5BJF2 176 aa13.48□□□□□ -0.25
HCFC1R1-202ENST00000354679 TEX261Q6UWH6 196 aa13.48□□□□□ -0.25
HCFC1R1-202ENST00000354679 LINC01551Q86U37 167 aa13.48□□□□□ -0.25
HCFC1R1-202ENST00000354679 KLK12Q9UKR0 248 aa13.48□□□□□ -0.25
HCFC1R1-202ENST00000354679 A8MWL6 223 aa13.47□□□□□ -0.25
HCFC1R1-202ENST00000354679 TMEM262E9PQX1 116 aa13.47□□□□□ -0.25
HCFC1R1-202ENST00000354679 ELOBQ15370 118 aa13.47□□□□□ -0.25
HCFC1R1-202ENST00000354679 CT83Q5H943 113 aa13.47□□□□□ -0.25
HCFC1R1-202ENST00000354679 RASL11AQ6T310 242 aa13.46□□□□□ -0.25
HCFC1R1-202ENST00000354679 NTM-AS1Q6ZSK4 140 aa13.46□□□□□ -0.25
HCFC1R1-202ENST00000354679 CHCHD5Q9BSY4 110 aa13.46□□□□□ -0.25
HCFC1R1-202ENST00000354679 UBE2WQ96B02 151 aa13.45□□□□□ -0.26
HCFC1R1-202ENST00000354679 RMI2Q96E14 147 aa13.45□□□□□ -0.26
HCFC1R1-202ENST00000354679 PCLOQ9Y6V0 5065 aa13.44□□□□□ -0.26
HCFC1R1-202ENST00000354679 ABCA13Q86UQ4 5058 aa13.44□□□□□ -0.26
HCFC1R1-202ENST00000354679 PKIAP61925 76 aa13.44□□□□□ -0.26
HCFC1R1-202ENST00000354679 Q8N814 137 aa13.44□□□□□ -0.26
HCFC1R1-202ENST00000354679 PGLYRP4Q96LB8 373 aa13.44□□□□□ -0.26
HCFC1R1-202ENST00000354679 COX11Q9Y6N1 276 aa13.44□□□□□ -0.26
HCFC1R1-202ENST00000354679 TRBV25-1A0A075B6N4 114 aa13.43□□□□□ -0.26
HCFC1R1-202ENST00000354679 MPV17L2Q567V2 206 aa13.43□□□□□ -0.26
HCFC1R1-202ENST00000354679 SMIM15Q7Z3B0 74 aa13.43□□□□□ -0.26
HCFC1R1-202ENST00000354679 NIT2Q9NQR4 276 aa13.43□□□□□ -0.26
HCFC1R1-202ENST00000354679 OSTCQ9NRP0 149 aa13.43□□□□□ -0.26
HCFC1R1-202ENST00000354679 IGKV2D-24A0A075B6R9 120 aa13.42□□□□□ -0.26
HCFC1R1-202ENST00000354679 FOXA3P55318 350 aaPredicted RBP13.42□□□□□ -0.26
HCFC1R1-202ENST00000354679 C15orf54Q8N8G6 183 aa13.42□□□□□ -0.26
HCFC1R1-202ENST00000354679 NTN5Q8WTR8 489 aaPredicted RBP13.42□□□□□ -0.26
HCFC1R1-202ENST00000354679 IGLV5-52A0A0A0MRZ9 124 aa13.41□□□□□ -0.26
HCFC1R1-202ENST00000354679 IGHV1-24A0A0C4DH33 117 aa13.41□□□□□ -0.26
HCFC1R1-202ENST00000354679 Q0VG73 95 aa13.41□□□□□ -0.26
HCFC1R1-202ENST00000354679 WFDC2Q14508 124 aa13.41□□□□□ -0.26
HCFC1R1-202ENST00000354679 IQCJQ1A5X6 159 aa13.41□□□□□ -0.26
HCFC1R1-202ENST00000354679 FAM74A3Q4VXF1 159 aa13.41□□□□□ -0.26
HCFC1R1-202ENST00000354679 TSKUQ8WUA8 353 aa13.41□□□□□ -0.26
HCFC1R1-202ENST00000354679 TRAV26-2A0A0B4J265 109 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 C9JQL5 133 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 GCSHP23434 173 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 KRTAP10-1P60331 282 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 SRSF3P84103 164 aaKnown RBP13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 GAGE6Q13070 117 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 PEA15Q15121 130 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 TMEM241Q24JQ0 296 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 ATRAIDQ6UW56 229 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 MAPKAPK5-AS1Q8N8E1 139 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 Q8N976 141 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 GATD1Q8NB37 220 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 BORCS7Q96B45 105 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 GFRA4Q9GZZ7 299 aa13.4□□□□□ -0.26
HCFC1R1-202ENST00000354679 HIGD1CA8MV81 97 aa13.39□□□□□ -0.27
HCFC1R1-202ENST00000354679 CRPP02741 224 aa13.39□□□□□ -0.27
HCFC1R1-202ENST00000354679 ANGP03950 147 aaKnown RBP13.39□□□□□ -0.27
HCFC1R1-202ENST00000354679 FRZBQ92765 325 aa13.39□□□□□ -0.27
HCFC1R1-202ENST00000354679 ISOC2Q96AB3 205 aa13.39□□□□□ -0.27
HCFC1R1-202ENST00000354679 FAM231BA6NCW3 169 aa13.38□□□□□ -0.27
HCFC1R1-202ENST00000354679 LECT2O14960 151 aa13.38□□□□□ -0.27
HCFC1R1-202ENST00000354679 RPL23P62829 140 aaKnown RBP13.38□□□□□ -0.27
HCFC1R1-202ENST00000354679 RBX1P62877 108 aa13.38□□□□□ -0.27
HCFC1R1-202ENST00000354679 ENHOQ6UWT2 76 aa13.38□□□□□ -0.27
HCFC1R1-202ENST00000354679 BAALCQ8WXS3 180 aa13.38□□□□□ -0.27
HCFC1R1-202ENST00000354679 KRTAP17-1Q9BYP8 105 aa13.38□□□□□ -0.27
HCFC1R1-202ENST00000354679 SMDT1Q9H4I9 107 aa13.38□□□□□ -0.27
HCFC1R1-202ENST00000354679 DNAH8Q96JB1 4490 aa13.38□□□□□ -0.27
HCFC1R1-202ENST00000354679 A0A1B0GUT8 65 aa13.37□□□□□ -0.27
HCFC1R1-202ENST00000354679 NAT8Q9UHE5 227 aa13.37□□□□□ -0.27
HCFC1R1-202ENST00000354679 V9GYV3 84 aa13.37□□□□□ -0.27
HCFC1R1-202ENST00000354679 ADIRFQ15847 76 aa13.36□□□□□ -0.27
HCFC1R1-202ENST00000354679 DEFB104AQ8WTQ1 72 aa13.36□□□□□ -0.27
HCFC1R1-202ENST00000354679 TMEM243Q9BU79 118 aa13.36□□□□□ -0.27
HCFC1R1-202ENST00000354679 C1orf43Q9BWL3 253 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms