RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 K7EQG2 157 aa9.25□□□□□ -0.93
SMAD9-201ENST00000350148 TRAV12-1A0A0B4J245 112 aa9.24□□□□□ -0.93
SMAD9-201ENST00000350148 GNRH2O43555 120 aa9.24□□□□□ -0.93
SMAD9-201ENST00000350148 HLA-DRB4P13762 266 aa9.24□□□□□ -0.93
SMAD9-201ENST00000350148 Q71RC1 249 aaPredicted RBP9.24□□□□□ -0.93
SMAD9-201ENST00000350148 TP53TG1Q9Y2A0 90 aa9.24□□□□□ -0.93
SMAD9-201ENST00000350148 HLA-DRB4X5D2U9 266 aa9.24□□□□□ -0.93
SMAD9-201ENST00000350148 Q6ZSV7 163 aa9.24□□□□□ -0.93
SMAD9-201ENST00000350148 DEFB104AQ8WTQ1 72 aa9.24□□□□□ -0.93
SMAD9-201ENST00000350148 TRBV25-1A0A075B6N4 114 aa9.24□□□□□ -0.93
SMAD9-201ENST00000350148 PAX4O43316 350 aa9.24□□□□□ -0.93
SMAD9-201ENST00000350148 HERVK_113P63121 156 aa9.24□□□□□ -0.93
SMAD9-201ENST00000350148 A0A087WX48 190 aa9.23□□□□□ -0.93
SMAD9-201ENST00000350148 A0A0B4J2C4 111 aa9.23□□□□□ -0.93
SMAD9-201ENST00000350148 A0A1B0GXF2 115 aa9.23□□□□□ -0.93
SMAD9-201ENST00000350148 IGHV3-53P01767 116 aa9.23□□□□□ -0.93
SMAD9-201ENST00000350148 FAM110AQ9BQ89 295 aa9.23□□□□□ -0.93
SMAD9-201ENST00000350148 MALP21145 153 aa9.23□□□□□ -0.93
SMAD9-201ENST00000350148 MKI67P46013 3256 aaKnown RBP9.22□□□□□ -0.93
SMAD9-201ENST00000350148 MED13LQ71F56 2210 aa9.22□□□□□ -0.93
SMAD9-201ENST00000350148 NDUFA7O95182 113 aa9.22□□□□□ -0.93
SMAD9-201ENST00000350148 JPT2Q9H910 190 aa9.21□□□□□ -0.93
SMAD9-201ENST00000350148 ARFGEF3Q5TH69 2177 aa9.21□□□□□ -0.93
SMAD9-201ENST00000350148 DEFB130BP0DP73 79 aa9.21□□□□□ -0.93
SMAD9-201ENST00000350148 DEFB130AP0DP74 79 aa9.21□□□□□ -0.93
SMAD9-201ENST00000350148 HILS1P60008 231 aa9.21□□□□□ -0.93
SMAD9-201ENST00000350148 TMEM61Q8N0U2 210 aa9.21□□□□□ -0.93
SMAD9-201ENST00000350148 TIMM21Q9BVV7 248 aa9.21□□□□□ -0.93
SMAD9-201ENST00000350148 SS18Q15532 418 aa9.21□□□□□ -0.94
SMAD9-201ENST00000350148 C3orf22Q8N5N4 141 aa9.21□□□□□ -0.94
SMAD9-201ENST00000350148 TLN1Q9Y490 2541 aaKnown RBP9.21□□□□□ -0.94
SMAD9-201ENST00000350148 NDUFC2-KCTD14E9PQ53 114 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 IGLC6P0CF74 106 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 MAP6D1Q9H9H5 199 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 F8VRH5 84 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 ZNF747Q9BV97 191 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 SMAD5-AS1Q9Y6J3 95 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 LAMA2P24043 3122 aaKnown RBP9.2□□□□□ -0.94
SMAD9-201ENST00000350148 SEC61GP60059 68 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 MPLKIPQ8TAP9 179 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 HCFC1P51610 2035 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 CFC1BP0CG36 223 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 CFC1P0CG37 223 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 DEFB114Q30KQ6 69 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 SCRT2Q9NQ03 307 aa9.2□□□□□ -0.94
SMAD9-201ENST00000350148 TRAV26-2A0A0B4J265 109 aa9.19□□□□□ -0.94
SMAD9-201ENST00000350148 SUMO4Q6EEV6 95 aa9.19□□□□□ -0.94
SMAD9-201ENST00000350148 APRG1Q8IVJ8 170 aa9.19□□□□□ -0.94
SMAD9-201ENST00000350148 ZNRF2Q8NHG8 242 aa9.19□□□□□ -0.94
SMAD9-201ENST00000350148 CDH23Q9H251 3354 aa9.19□□□□□ -0.94
SMAD9-201ENST00000350148 FAM236DA0A1B0GTK5 79 aa9.19□□□□□ -0.94
SMAD9-201ENST00000350148 FAM236CP0DP71 79 aa9.19□□□□□ -0.94
SMAD9-201ENST00000350148 LINC00310P59036 64 aa9.19□□□□□ -0.94
SMAD9-201ENST00000350148 TINCRA0A1B0GVN0 87 aa9.18□□□□□ -0.94
SMAD9-201ENST00000350148 IGKV3D-7A0A0C4DH55 119 aa9.18□□□□□ -0.94
SMAD9-201ENST00000350148 CXCL5P42830 114 aa9.18□□□□□ -0.94
SMAD9-201ENST00000350148 PCP2Q8IVA1 136 aa9.18□□□□□ -0.94
SMAD9-201ENST00000350148 Q8N1Y9 231 aa9.18□□□□□ -0.94
SMAD9-201ENST00000350148 WFDC9Q8NEX5 89 aa9.18□□□□□ -0.94
SMAD9-201ENST00000350148 SPATA12Q7Z6I5 190 aa9.18□□□□□ -0.94
SMAD9-201ENST00000350148 AVPP01185 164 aa9.17□□□□□ -0.94
SMAD9-201ENST00000350148 ABCA1O95477 2261 aa9.17□□□□□ -0.94
SMAD9-201ENST00000350148 DAZ2Q13117 558 aaKnown RBP9.17□□□□□ -0.94
SMAD9-201ENST00000350148 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
SMAD9-201ENST00000350148 DAZ4Q86SG3 579 aaKnown RBP9.17□□□□□ -0.94
SMAD9-201ENST00000350148 DAZ3Q9NR90 486 aaKnown RBP9.17□□□□□ -0.94
SMAD9-201ENST00000350148 CACNA1AO00555 2505 aa9.16□□□□□ -0.94
SMAD9-201ENST00000350148 RAI1Q7Z5J4 1906 aaPredicted RBP9.16□□□□□ -0.94
SMAD9-201ENST00000350148 LY6G6DO95868 133 aa9.16□□□□□ -0.94
SMAD9-201ENST00000350148 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
SMAD9-201ENST00000350148 SHISA2Q6UWI4 295 aa9.16□□□□□ -0.94
SMAD9-201ENST00000350148 IGLV2-11P01706 119 aa9.16□□□□□ -0.94
SMAD9-201ENST00000350148 MUSTN1Q8IVN3 82 aa9.16□□□□□ -0.94
SMAD9-201ENST00000350148 TMEM263Q8WUH6 116 aaKnown RBP9.16□□□□□ -0.94
SMAD9-201ENST00000350148 NOP10Q9NPE3 64 aaKnown RBP9.16□□□□□ -0.94
SMAD9-201ENST00000350148 TNCP24821 2201 aa9.16□□□□□ -0.94
SMAD9-201ENST00000350148 BAALC-AS2P0C853 105 aa9.16□□□□□ -0.94
SMAD9-201ENST00000350148 BBC3Q96PG8 261 aaPredicted RBP9.16□□□□□ -0.94
SMAD9-201ENST00000350148 MRPS12O15235 138 aaKnown RBP9.15□□□□□ -0.94
SMAD9-201ENST00000350148 TANC2Q9HCD6 1990 aa9.15□□□□□ -0.94
SMAD9-201ENST00000350148 CCDC179H3BU77 68 aa9.15□□□□□ -0.94
SMAD9-201ENST00000350148 BAALCQ8WXS3 180 aa9.15□□□□□ -0.94
SMAD9-201ENST00000350148 MRPL35Q9NZE8 188 aaKnown RBP9.15□□□□□ -0.94
SMAD9-201ENST00000350148 IGHV3-16A0A0C4DH30 117 aa9.15□□□□□ -0.94
SMAD9-201ENST00000350148 K7EQD1 137 aa9.15□□□□□ -0.94
SMAD9-201ENST00000350148 CRLF1O75462 422 aa9.15□□□□□ -0.94
SMAD9-201ENST00000350148 ZNF80P51504 273 aaPredicted RBP9.15□□□□□ -0.94
SMAD9-201ENST00000350148 MRGPRG-AS1Q2M3A8 158 aa9.15□□□□□ -0.94
SMAD9-201ENST00000350148 C16orf95Q9H693 158 aa9.15□□□□□ -0.94
SMAD9-201ENST00000350148 KRTAP10-9P60411 292 aa9.15□□□□□ -0.95
SMAD9-201ENST00000350148 HTTP42858 3142 aa9.15□□□□□ -0.95
SMAD9-201ENST00000350148 PRB2P02812 416 aaPredicted RBP9.14□□□□□ -0.95
SMAD9-201ENST00000350148 FXYD2P54710 66 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 TTTY13Q9BZ97 58 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 TRBV10-1A0A0K0K1A3 114 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 hADV29S1A0JD25 119 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 ODF1Q14990 250 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 GDF5OSQ5U4N7 250 aa9.14□□□□□ -0.95
SMAD9-201ENST00000350148 LINC00322Q6ZN03 302 aaPredicted RBP9.14□□□□□ -0.95
SMAD9-201ENST00000350148 PIFOQ8TCI5 191 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms