RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 COL4A5P29400 1685 aa6.48□□□□□ -1.37
MCPH1-201ENST00000344683 BPTFQ12830 3046 aa6.48□□□□□ -1.37
MCPH1-201ENST00000344683 NFE4Q86UQ8 179 aa6.48□□□□□ -1.37
MCPH1-201ENST00000344683 IGHV3-30-3P0DP02 117 aa6.48□□□□□ -1.37
MCPH1-201ENST00000344683 GP9P14770 177 aa6.48□□□□□ -1.37
MCPH1-201ENST00000344683 H7C423 109 aa6.48□□□□□ -1.37
MCPH1-201ENST00000344683 B3GALT5-AS1P59052 145 aa6.48□□□□□ -1.37
MCPH1-201ENST00000344683 HHLA3Q9XRX5 114 aa6.48□□□□□ -1.37
MCPH1-201ENST00000344683 CCL18P55774 89 aa6.48□□□□□ -1.37
MCPH1-201ENST00000344683 ROS1P08922 2347 aa6.48□□□□□ -1.37
MCPH1-201ENST00000344683 E7EQL1 145 aa6.47□□□□□ -1.37
MCPH1-201ENST00000344683 M0QXV9 152 aa6.47□□□□□ -1.37
MCPH1-201ENST00000344683 PTPRBP23467 1997 aa6.47□□□□□ -1.37
MCPH1-201ENST00000344683 USP34Q70CQ2 3546 aa6.47□□□□□ -1.37
MCPH1-201ENST00000344683 RPL39P62891 51 aaKnown RBP6.47□□□□□ -1.37
MCPH1-201ENST00000344683 RUSC1-AS1Q66K80 236 aa6.47□□□□□ -1.37
MCPH1-201ENST00000344683 A0A0J9YXY3 114 aa6.47□□□□□ -1.37
MCPH1-201ENST00000344683 SPART-AS1P0CW21 52 aa6.47□□□□□ -1.37
MCPH1-201ENST00000344683 ZNRD1Q9P1U0 126 aa6.47□□□□□ -1.37
MCPH1-201ENST00000344683 SMIM9A6NGZ8 99 aa6.47□□□□□ -1.37
MCPH1-201ENST00000344683 RBX1P62877 108 aa6.46□□□□□ -1.37
MCPH1-201ENST00000344683 SPAG11BQ08648 103 aa6.46□□□□□ -1.37
MCPH1-201ENST00000344683 TET2Q6N021 2002 aaPredicted RBP6.46□□□□□ -1.37
MCPH1-201ENST00000344683 EP300Q09472 2414 aaPredicted RBP6.46□□□□□ -1.37
MCPH1-201ENST00000344683 C14orf177Q52M58 125 aa6.46□□□□□ -1.38
MCPH1-201ENST00000344683 UFSP1Q6NVU6 142 aa6.46□□□□□ -1.38
MCPH1-201ENST00000344683 CCDC179H3BU77 68 aa6.46□□□□□ -1.38
MCPH1-201ENST00000344683 NPBQ8NG41 125 aa6.46□□□□□ -1.38
MCPH1-201ENST00000344683 IGLV10-54A0A075B6I4 117 aa6.46□□□□□ -1.38
MCPH1-201ENST00000344683 WFDC10BQ8IUB3 73 aa6.46□□□□□ -1.38
MCPH1-201ENST00000344683 SNURFQ9Y675 71 aa6.46□□□□□ -1.38
MCPH1-201ENST00000344683 SORL1Q92673 2214 aa6.45□□□□□ -1.38
MCPH1-201ENST00000344683 KAAG1Q9UBP8 84 aa6.45□□□□□ -1.38
MCPH1-201ENST00000344683 A0A0J9YY99 117 aa6.45□□□□□ -1.38
MCPH1-201ENST00000344683 LOXL1Q08397 574 aaPredicted RBP6.45□□□□□ -1.38
MCPH1-201ENST00000344683 TPSG1Q9NRR2 321 aa6.45□□□□□ -1.38
MCPH1-201ENST00000344683 TRBV27A0A0K0K1C4 114 aa6.45□□□□□ -1.38
MCPH1-201ENST00000344683 C1orf147Q96MC9 270 aaPredicted RBP6.45□□□□□ -1.38
MCPH1-201ENST00000344683 LOXP28300 417 aaPredicted RBP6.45□□□□□ -1.38
MCPH1-201ENST00000344683 MALRD1Q5VYJ5 2156 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 CCL24O00175 119 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 Q8N9L7 120 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 TRAV7A0A075B6U4 112 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 CEP350Q5VT06 3117 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 C9orf66Q5T8R8 295 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 RNF138Q8WVD3 245 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 MUC4Q99102 2169 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 COL5A1P20908 1838 aaPredicted RBP6.44□□□□□ -1.38
MCPH1-201ENST00000344683 MIFP14174 115 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 PTPRSQ13332 1948 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 TRBV10-1A0A0K0K1A3 114 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 C2orf70A6NJV1 201 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 FHL1Q13642 323 aa6.44□□□□□ -1.38
MCPH1-201ENST00000344683 CSRP1P21291 193 aaKnown RBP6.43□□□□□ -1.38
MCPH1-201ENST00000344683 IGLV3-9A0A075B6K5 115 aa6.43□□□□□ -1.38
MCPH1-201ENST00000344683 IGLV3-1P01715 115 aa6.43□□□□□ -1.38
MCPH1-201ENST00000344683 ARTNQ5T4W7 220 aa6.43□□□□□ -1.38
MCPH1-201ENST00000344683 DSCAMO60469 2012 aa6.43□□□□□ -1.38
MCPH1-201ENST00000344683 TMEM263Q8WUH6 116 aaKnown RBP6.43□□□□□ -1.38
MCPH1-201ENST00000344683 Q6ZR03 302 aa6.43□□□□□ -1.38
MCPH1-201ENST00000344683 TRIAP1O43715 76 aa6.43□□□□□ -1.38
MCPH1-201ENST00000344683 I3L2K1 104 aa6.42□□□□□ -1.38
MCPH1-201ENST00000344683 GVINP1Q7Z2Y8 2422 aa6.42□□□□□ -1.38
MCPH1-201ENST00000344683 IGHV4-59P01825 116 aa6.42□□□□□ -1.38
MCPH1-201ENST00000344683 FAM167A-AS1Q96KT0 104 aa6.42□□□□□ -1.38
MCPH1-201ENST00000344683 IBA57-AS1B1ANH7 110 aa6.42□□□□□ -1.38
MCPH1-201ENST00000344683 VPREB3Q9UKI3 123 aa6.42□□□□□ -1.38
MCPH1-201ENST00000344683 HRCT1Q6UXD1 115 aa6.42□□□□□ -1.38
MCPH1-201ENST00000344683 WFDC10AQ9H1F0 79 aa6.42□□□□□ -1.38
MCPH1-201ENST00000344683 UBE2D2P62837 147 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 Q0VFX4 171 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 DEFB112Q30KQ8 113 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 NRACQ8N912 160 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 CLUHP3Q96NS8 147 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 TMEM223A0PJW6 202 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 FAM222AQ5U5X8 452 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 IGLV11-55A0A075B6I3 123 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 Q6JHZ5 121 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 C20orf203Q8NBC4 194 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 C19orf71A6NCJ1 209 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 IGHV3-30P01768 117 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 IGHV3-33P01772 117 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 IGHV3-30-5P0DP03 117 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 NEXN-AS1Q8NBZ9 246 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 A0A1B0GXF2 115 aa6.41□□□□□ -1.38
MCPH1-201ENST00000344683 CPAMD8Q8IZJ3 1885 aa6.4□□□□□ -1.38
MCPH1-201ENST00000344683 IGLV1-44P01699 117 aa6.4□□□□□ -1.38
MCPH1-201ENST00000344683 C9orf85Q96MD7 179 aa6.4□□□□□ -1.38
MCPH1-201ENST00000344683 K7ENP7 123 aa6.4□□□□□ -1.38
MCPH1-201ENST00000344683 FAM19A5Q7Z5A7 132 aaPredicted RBP6.4□□□□□ -1.38
MCPH1-201ENST00000344683 MSRB1Q9NZV6 116 aa6.4□□□□□ -1.38
MCPH1-201ENST00000344683 K7EMT4 169 aa6.4□□□□□ -1.39
MCPH1-201ENST00000344683 MRPS12O15235 138 aaKnown RBP6.4□□□□□ -1.39
MCPH1-201ENST00000344683 ZFAND2AQ8N6M9 145 aa6.4□□□□□ -1.39
MCPH1-201ENST00000344683 ACACAQ13085 2346 aa6.39□□□□□ -1.39
MCPH1-201ENST00000344683 CCKP06307 115 aa6.39□□□□□ -1.39
MCPH1-201ENST00000344683 C17orf82Q86X59 251 aaPredicted RBP6.39□□□□□ -1.39
MCPH1-201ENST00000344683 TP73-AS1Q9UF72 201 aa6.39□□□□□ -1.39
MCPH1-201ENST00000344683 CSDC2Q9Y534 153 aaKnown RBP6.39□□□□□ -1.39
MCPH1-201ENST00000344683 LRP4O75096 1905 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms