RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 LYZL1Q6UWQ5 148 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 TPPP3Q9BW30 176 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 OSTCQ9NRP0 149 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 FAT2Q9NYQ8 4349 aa8.94□□□□□ -0.98
HLA-DQA1-201ENST00000343139 TRAV9-1A0A075B6T8 112 aa8.94□□□□□ -0.98
HLA-DQA1-201ENST00000343139 RTL8CO15255 209 aa8.94□□□□□ -0.98
HLA-DQA1-201ENST00000343139 S100A6P06703 90 aa8.94□□□□□ -0.98
HLA-DQA1-201ENST00000343139 TRGC1P0CF51 173 aa8.94□□□□□ -0.98
HLA-DQA1-201ENST00000343139 LINC00315P59091 139 aa8.94□□□□□ -0.98
HLA-DQA1-201ENST00000343139 LELP1Q5T871 98 aa8.94□□□□□ -0.98
HLA-DQA1-201ENST00000343139 GFRA4Q9GZZ7 299 aa8.94□□□□□ -0.98
HLA-DQA1-201ENST00000343139 URGCP-MRPS24S4R325 110 aa8.94□□□□□ -0.98
HLA-DQA1-201ENST00000343139 TRAV9-2A0A087WT02 112 aa8.93□□□□□ -0.98
HLA-DQA1-201ENST00000343139 TGIF2-C20orf24A0A0A6YYL0 155 aa8.93□□□□□ -0.98
HLA-DQA1-201ENST00000343139 MUC21A0A0G2JKD1 596 aa8.93□□□□□ -0.98
HLA-DQA1-201ENST00000343139 MUC21A0A140T8X8 626 aa8.93□□□□□ -0.98
HLA-DQA1-201ENST00000343139 DNAH10OSP0CZ25 163 aa8.93□□□□□ -0.98
HLA-DQA1-201ENST00000343139 C6orf223Q8N319 242 aa8.93□□□□□ -0.98
HLA-DQA1-201ENST00000343139 DNAH17Q9UFH2 4485 aa8.93□□□□□ -0.98
HLA-DQA1-201ENST00000343139 TRBV7-3A0A075B6L6 115 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 GAGE12JA6NER3 117 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 NTF3P20783 257 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 RPL36AP83881 106 aaKnown RBP8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 GAGE1Q13065 139 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 GAGE4Q13068 117 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 GAGE5Q13069 117 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 ZNF56Q15929 161 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 GAGE13Q4V321 117 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 TSKUQ8WUA8 353 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 GTSF1Q8WW33 167 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 RPL36ALQ969Q0 106 aaKnown RBP8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 KRTAP1-5Q9BYS1 174 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
HLA-DQA1-201ENST00000343139 TRAV8-6A0A0B4J262 113 aa8.91□□□□□ -0.98
HLA-DQA1-201ENST00000343139 C5orf52A6NGY3 159 aa8.91□□□□□ -0.98
HLA-DQA1-201ENST00000343139 MSRB1Q9NZV6 116 aa8.91□□□□□ -0.98
HLA-DQA1-201ENST00000343139 Q9UF83 564 aa8.91□□□□□ -0.98
HLA-DQA1-201ENST00000343139 IGHV3-38A0A0C4DH36 116 aa8.9□□□□□ -0.98
HLA-DQA1-201ENST00000343139 H7C1H1 209 aa8.9□□□□□ -0.98
HLA-DQA1-201ENST00000343139 EVI2AP22794 236 aa8.9□□□□□ -0.98
HLA-DQA1-201ENST00000343139 UBE2D3P61077 147 aa8.9□□□□□ -0.98
HLA-DQA1-201ENST00000343139 UBE2D2P62837 147 aa8.9□□□□□ -0.98
HLA-DQA1-201ENST00000343139 LINC01556Q5JQF7 62 aa8.9□□□□□ -0.98
HLA-DQA1-201ENST00000343139 WFDC10BQ8IUB3 73 aa8.9□□□□□ -0.98
HLA-DQA1-201ENST00000343139 C10orf126Q8N4M7 172 aa8.9□□□□□ -0.98
HLA-DQA1-201ENST00000343139 DPH3P1Q9H4G8 78 aa8.9□□□□□ -0.98
HLA-DQA1-201ENST00000343139 F5H697 171 aa8.9□□□□□ -0.99
HLA-DQA1-201ENST00000343139 SSTP61278 116 aa8.9□□□□□ -0.99
HLA-DQA1-201ENST00000343139 TWIST1Q15672 202 aa8.9□□□□□ -0.99
HLA-DQA1-201ENST00000343139 V9GYV3 84 aa8.9□□□□□ -0.99
HLA-DQA1-201ENST00000343139 PRSS29PA6NIE9 313 aa8.89□□□□□ -0.99
HLA-DQA1-201ENST00000343139 M0QY20 66 aa8.89□□□□□ -0.99
HLA-DQA1-201ENST00000343139 OR10J3Q5JRS4 329 aa8.89□□□□□ -0.99
HLA-DQA1-201ENST00000343139 NEXN-AS1Q8NBZ9 246 aa8.89□□□□□ -0.99
HLA-DQA1-201ENST00000343139 FRZBQ92765 325 aa8.89□□□□□ -0.99
HLA-DQA1-201ENST00000343139 DNAJC30Q96LL9 226 aa8.89□□□□□ -0.99
HLA-DQA1-201ENST00000343139 S100A8P05109 93 aa8.88□□□□□ -0.99
HLA-DQA1-201ENST00000343139 SNRPEP62304 92 aaKnown RBP8.88□□□□□ -0.99
HLA-DQA1-201ENST00000343139 SMIM15Q7Z3B0 74 aa8.88□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIGD1CA8MV81 97 aa8.87□□□□□ -0.99
HLA-DQA1-201ENST00000343139 PHOX2AO14813 284 aa8.87□□□□□ -0.99
HLA-DQA1-201ENST00000343139 TRGC2P03986 189 aa8.87□□□□□ -0.99
HLA-DQA1-201ENST00000343139 TMEM97Q5BJF2 176 aa8.87□□□□□ -0.99
HLA-DQA1-201ENST00000343139 DAZ4Q86SG3 579 aaKnown RBP8.87□□□□□ -0.99
HLA-DQA1-201ENST00000343139 NFE4Q86UQ8 179 aa8.87□□□□□ -0.99
HLA-DQA1-201ENST00000343139 BORCS7Q96B45 105 aa8.87□□□□□ -0.99
HLA-DQA1-201ENST00000343139 DAZ3Q9NR90 486 aaKnown RBP8.87□□□□□ -0.99
HLA-DQA1-201ENST00000343139 BIRC6Q9NR09 4857 aa8.87□□□□□ -0.99
HLA-DQA1-201ENST00000343139 A0A1B0GUT8 65 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 A0A1B0GVY2 172 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIST1H2BKO60814 126 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIST1H2BJP06899 126 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIST1H2BOP23527 126 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIST1H2BBP33778 126 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIST1H2BDP58876 126 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIST1H2BCP62807 126 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIST2H2BEQ16778 126 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 SUMO4Q6EEV6 95 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIST1H2BHQ93079 126 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 PGLYRP4Q96LB8 373 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIST1H2BNQ99877 126 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 HIST1H2BMQ99879 126 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 MGPP08493 103 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 FABP9Q0Z7S8 132 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 COX19Q49B96 90 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 RASL11AQ6T310 242 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 CHCHD7Q9BUK0 85 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 NAT8BQ9UHF3 227 aa8.86□□□□□ -0.99
HLA-DQA1-201ENST00000343139 TRBV6-8A0A0A6YYG3 113 aa8.85□□□□□ -0.99
HLA-DQA1-201ENST00000343139 SMIM27A0A1W2PRY6 76 aa8.85□□□□□ -0.99
HLA-DQA1-201ENST00000343139 LAGE3Q14657 143 aa8.85□□□□□ -0.99
HLA-DQA1-201ENST00000343139 Q6ZRN7 208 aaPredicted RBP8.85□□□□□ -0.99
HLA-DQA1-201ENST00000343139 NIT2Q9NQR4 276 aa8.85□□□□□ -0.99
HLA-DQA1-201ENST00000343139 TNFRSF18Q9Y5U5 241 aa8.85□□□□□ -0.99
HLA-DQA1-201ENST00000343139 IBA57-AS1B1ANH7 110 aa8.84□□□□□ -0.99
HLA-DQA1-201ENST00000343139 AKR1D1P51857 326 aa8.84□□□□□ -0.99
HLA-DQA1-201ENST00000343139 LINC00518Q8N0U6 118 aa8.84□□□□□ -0.99
HLA-DQA1-201ENST00000343139 NUP35Q8NFH5 326 aa8.84□□□□□ -0.99
HLA-DQA1-201ENST00000343139 TMEM191AQ9H0A3 160 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms