RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 C20orf203Q8NBC4 194 aa13.79□□□□□ -0.2
SMPD1-201ENST00000342245 FAM19A4Q96LR4 140 aa13.79□□□□□ -0.2
SMPD1-201ENST00000342245 FAM215AQ9Y5M1 114 aa13.79□□□□□ -0.2
SMPD1-201ENST00000342245 TRBV7-1A0A0A6YYK4 115 aa13.79□□□□□ -0.2
SMPD1-201ENST00000342245 TRAV41A0A0B4J266 112 aa13.79□□□□□ -0.2
SMPD1-201ENST00000342245 GNRH2O43555 120 aa13.78□□□□□ -0.2
SMPD1-201ENST00000342245 IGF1P05019 195 aa13.78□□□□□ -0.2
SMPD1-201ENST00000342245 MRPS36P82909 103 aaKnown RBP13.78□□□□□ -0.2
SMPD1-201ENST00000342245 DUX5Q96PT3 197 aa13.78□□□□□ -0.2
SMPD1-201ENST00000342245 ZNF318Q5VUA4 2279 aa13.77□□□□□ -0.2
SMPD1-201ENST00000342245 IGLV4-3A0A075B6K6 122 aa13.77□□□□□ -0.21
SMPD1-201ENST00000342245 Q8N6K4 173 aa13.77□□□□□ -0.21
SMPD1-201ENST00000342245 SERP2Q8N6R1 65 aa13.77□□□□□ -0.21
SMPD1-201ENST00000342245 BSPH1Q075Z2 132 aa13.76□□□□□ -0.21
SMPD1-201ENST00000342245 VMO1Q7Z5L0 202 aa13.76□□□□□ -0.21
SMPD1-201ENST00000342245 COPS9Q8WXC6 57 aa13.76□□□□□ -0.21
SMPD1-201ENST00000342245 PYGO1Q9Y3Y4 419 aa13.76□□□□□ -0.21
SMPD1-201ENST00000342245 ICE1Q9Y2F5 2266 aa13.76□□□□□ -0.21
SMPD1-201ENST00000342245 UCNP55089 124 aa13.76□□□□□ -0.21
SMPD1-201ENST00000342245 DAZ2Q13117 558 aaKnown RBP13.76□□□□□ -0.21
SMPD1-201ENST00000342245 DAZ4Q86SG3 579 aaKnown RBP13.76□□□□□ -0.21
SMPD1-201ENST00000342245 LY6G5BQ8NDX9 201 aa13.76□□□□□ -0.21
SMPD1-201ENST00000342245 DAZ1Q9NQZ3 744 aaKnown RBP13.76□□□□□ -0.21
SMPD1-201ENST00000342245 DAZ3Q9NR90 486 aaKnown RBP13.76□□□□□ -0.21
SMPD1-201ENST00000342245 PLCE1Q9P212 2302 aa13.76□□□□□ -0.21
SMPD1-201ENST00000342245 OPRPNQ99935 248 aaPredicted RBP13.75□□□□□ -0.21
SMPD1-201ENST00000342245 Q5XG85 94 aa13.75□□□□□ -0.21
SMPD1-201ENST00000342245 C20orf173Q96LM9 149 aa13.75□□□□□ -0.21
SMPD1-201ENST00000342245 IGHV3OR16-13A0A075B7E8 117 aa13.74□□□□□ -0.21
SMPD1-201ENST00000342245 IGHV7-81A0A0B4J1V7 117 aa13.74□□□□□ -0.21
SMPD1-201ENST00000342245 IGHV3-74A0A0B4J1X5 117 aa13.74□□□□□ -0.21
SMPD1-201ENST00000342245 UPK3BQ9BT76 320 aa13.74□□□□□ -0.21
SMPD1-201ENST00000342245 ODF3BA8MYP8 253 aa13.74□□□□□ -0.21
SMPD1-201ENST00000342245 VSIG2Q96IQ7 327 aa13.74□□□□□ -0.21
SMPD1-201ENST00000342245 ADARB2-AS1A8MUL3 147 aa13.73□□□□□ -0.21
SMPD1-201ENST00000342245 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
SMPD1-201ENST00000342245 BOD1L1Q8NFC6 3051 aa13.73□□□□□ -0.21
SMPD1-201ENST00000342245 CIRBPQ14011 172 aaKnown RBP13.73□□□□□ -0.21
SMPD1-201ENST00000342245 C4orf26Q17RF5 130 aa13.73□□□□□ -0.21
SMPD1-201ENST00000342245 ZNF580Q9UK33 172 aa13.73□□□□□ -0.21
SMPD1-201ENST00000342245 BAALC-AS2P0C853 105 aa13.72□□□□□ -0.21
SMPD1-201ENST00000342245 Q6ZSV7 163 aa13.72□□□□□ -0.21
SMPD1-201ENST00000342245 CCDC140Q96MF4 163 aa13.72□□□□□ -0.21
SMPD1-201ENST00000342245 TIRAPP58753 221 aa13.72□□□□□ -0.21
SMPD1-201ENST00000342245 EP300Q09472 2414 aaPredicted RBP13.72□□□□□ -0.21
SMPD1-201ENST00000342245 M0R1W7 72 aa13.71□□□□□ -0.21
SMPD1-201ENST00000342245 OXTP01178 125 aa13.71□□□□□ -0.21
SMPD1-201ENST00000342245 CACNA1HO95180 2353 aa13.71□□□□□ -0.21
SMPD1-201ENST00000342245 M0QY20 66 aa13.71□□□□□ -0.21
SMPD1-201ENST00000342245 ZNF415Q09FC8 603 aa13.71□□□□□ -0.21
SMPD1-201ENST00000342245 HRCT1Q6UXD1 115 aa13.71□□□□□ -0.21
SMPD1-201ENST00000342245 CYSTM1Q9H1C7 97 aa13.71□□□□□ -0.21
SMPD1-201ENST00000342245 A0A087WWL8 130 aa13.7□□□□□ -0.22
SMPD1-201ENST00000342245 IGHV3-49A0A0A0MS15 119 aa13.7□□□□□ -0.22
SMPD1-201ENST00000342245 TINCRA0A1B0GVN0 87 aa13.7□□□□□ -0.22
SMPD1-201ENST00000342245 B9A039 149 aa13.7□□□□□ -0.22
SMPD1-201ENST00000342245 TRAV13-1A0A0B4J241 112 aa13.7□□□□□ -0.22
SMPD1-201ENST00000342245 NDUFC2-KCTD14E9PQ53 114 aa13.7□□□□□ -0.22
SMPD1-201ENST00000342245 DEFB104AQ8WTQ1 72 aa13.7□□□□□ -0.22
SMPD1-201ENST00000342245 BEAN1Q3B7T3 259 aa13.69□□□□□ -0.22
SMPD1-201ENST00000342245 Q6JHZ5 121 aa13.69□□□□□ -0.22
SMPD1-201ENST00000342245 LAMA5O15230 3695 aa13.69□□□□□ -0.22
SMPD1-201ENST00000342245 K7ENP7 123 aa13.69□□□□□ -0.22
SMPD1-201ENST00000342245 CD28P10747 220 aa13.69□□□□□ -0.22
SMPD1-201ENST00000342245 RPL11P62913 178 aaKnown RBP13.69□□□□□ -0.22
SMPD1-201ENST00000342245 DSCR8Q96T75 97 aa13.68□□□□□ -0.22
SMPD1-201ENST00000342245 JPT2Q9H910 190 aa13.68□□□□□ -0.22
SMPD1-201ENST00000342245 DMXL1Q9Y485 3027 aa13.68□□□□□ -0.22
SMPD1-201ENST00000342245 SOCS3O14543 225 aa13.68□□□□□ -0.22
SMPD1-201ENST00000342245 NPC2P61916 151 aa13.68□□□□□ -0.22
SMPD1-201ENST00000342245 OTOGLQ3ZCN5 2332 aa13.67□□□□□ -0.22
SMPD1-201ENST00000342245 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
SMPD1-201ENST00000342245 MINOS1-NBL1R4GNA1 71 aa13.67□□□□□ -0.22
SMPD1-201ENST00000342245 IGHV3OR16-10A0A075B7F0 116 aa13.66□□□□□ -0.22
SMPD1-201ENST00000342245 KLLNB2CW77 178 aa13.66□□□□□ -0.22
SMPD1-201ENST00000342245 NDUFA1O15239 70 aa13.66□□□□□ -0.22
SMPD1-201ENST00000342245 KLRB1Q12918 225 aa13.66□□□□□ -0.22
SMPD1-201ENST00000342245 ECSCRQ19T08 205 aa13.66□□□□□ -0.22
SMPD1-201ENST00000342245 Q8N9W7 124 aa13.66□□□□□ -0.22
SMPD1-201ENST00000342245 OVOL2Q9BRP0 275 aa13.65□□□□□ -0.22
SMPD1-201ENST00000342245 MUC4Q99102 2169 aa13.65□□□□□ -0.22
SMPD1-201ENST00000342245 ARHGAP32A7KAX9 2087 aa13.65□□□□□ -0.22
SMPD1-201ENST00000342245 MALP21145 153 aa13.65□□□□□ -0.22
SMPD1-201ENST00000342245 CNOT1A5YKK6 2376 aaKnown RBP13.65□□□□□ -0.23
SMPD1-201ENST00000342245 TRAV12-3A0A0B4J271 114 aa13.64□□□□□ -0.23
SMPD1-201ENST00000342245 FAM74A4Q5TZK3 123 aa13.64□□□□□ -0.23
SMPD1-201ENST00000342245 PRRC2AP48634 2157 aaKnown RBP13.64□□□□□ -0.23
SMPD1-201ENST00000342245 DNAL4O96015 105 aa13.64□□□□□ -0.23
SMPD1-201ENST00000342245 LINC00308Q8TCZ7 52 aa13.64□□□□□ -0.23
SMPD1-201ENST00000342245 C9orf85Q96MD7 179 aa13.64□□□□□ -0.23
SMPD1-201ENST00000342245 E7EQL1 145 aa13.63□□□□□ -0.23
SMPD1-201ENST00000342245 NDUFC2O95298 119 aa13.63□□□□□ -0.23
SMPD1-201ENST00000342245 PRO0628Q9UI54 55 aa13.63□□□□□ -0.23
SMPD1-201ENST00000342245 TTC28Q96AY4 2481 aa13.63□□□□□ -0.23
SMPD1-201ENST00000342245 SYNJ2BPP57105 145 aa13.63□□□□□ -0.23
SMPD1-201ENST00000342245 C22orf24Q9Y442 160 aa13.63□□□□□ -0.23
SMPD1-201ENST00000342245 ATP6V0E1O15342 81 aa13.62□□□□□ -0.23
SMPD1-201ENST00000342245 PRIMA1Q86XR5 153 aa13.62□□□□□ -0.23
SMPD1-201ENST00000342245 SMG1Q96Q15 3661 aaKnown RBP13.62□□□□□ -0.23
SMPD1-201ENST00000342245 F8WDY8 70 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms