RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 IGLV1-40P01703 118 aa14.75□□□□□ -0.05
SEMA6C-201ENST00000341697 IGLV2-8P01709 118 aa14.75□□□□□ -0.05
SEMA6C-201ENST00000341697 Q6ZS46 218 aa14.75□□□□□ -0.05
SEMA6C-201ENST00000341697 TRAV13-2A0A0B4J235 113 aa14.75□□□□□ -0.05
SEMA6C-201ENST00000341697 COX7A2LO14548 114 aa14.75□□□□□ -0.05
SEMA6C-201ENST00000341697 HERV-K104P63124 156 aa14.75□□□□□ -0.05
SEMA6C-201ENST00000341697 EDA2RQ9HAV5 297 aa14.75□□□□□ -0.05
SEMA6C-201ENST00000341697 SMIM9A6NGZ8 99 aa14.74□□□□□ -0.05
SEMA6C-201ENST00000341697 C9JAW5 83 aa14.74□□□□□ -0.05
SEMA6C-201ENST00000341697 RPL39P62891 51 aaKnown RBP14.74□□□□□ -0.05
SEMA6C-201ENST00000341697 SIVA1O15304 175 aa14.74□□□□□ -0.05
SEMA6C-201ENST00000341697 LINC00322Q6ZN03 302 aaPredicted RBP14.73□□□□□ -0.05
SEMA6C-201ENST00000341697 MLST8Q9BVC4 326 aa14.73□□□□□ -0.05
SEMA6C-201ENST00000341697 TP53TG3Q9ULZ0 132 aa14.73□□□□□ -0.05
SEMA6C-201ENST00000341697 CHD8Q9HCK8 2581 aa14.73□□□□□ -0.05
SEMA6C-201ENST00000341697 SNHG12Q9BXW3 62 aa14.73□□□□□ -0.05
SEMA6C-201ENST00000341697 VSIG2Q96IQ7 327 aa14.73□□□□□ -0.05
SEMA6C-201ENST00000341697 CEND1Q8N111 149 aa14.72□□□□□ -0.05
SEMA6C-201ENST00000341697 PRO1854Q9UHT4 67 aa14.72□□□□□ -0.05
SEMA6C-201ENST00000341697 CAMK2N2Q96S95 79 aa14.72□□□□□ -0.05
SEMA6C-201ENST00000341697 SCRT2Q9NQ03 307 aa14.72□□□□□ -0.05
SEMA6C-201ENST00000341697 MTURNQ8N3F0 131 aa14.72□□□□□ -0.05
SEMA6C-201ENST00000341697 C11orf45Q8TAV5 145 aa14.72□□□□□ -0.05
SEMA6C-201ENST00000341697 NUPR1O60356 82 aa14.72□□□□□ -0.05
SEMA6C-201ENST00000341697 Q6ZTI0 123 aa14.72□□□□□ -0.05
SEMA6C-201ENST00000341697 MAJINQ3KP22 176 aa14.71□□□□□ -0.05
SEMA6C-201ENST00000341697 TOMM6Q96B49 74 aa14.71□□□□□ -0.05
SEMA6C-201ENST00000341697 TIMM17AQ99595 171 aa14.71□□□□□ -0.05
SEMA6C-201ENST00000341697 PKIGQ9Y2B9 76 aa14.71□□□□□ -0.05
SEMA6C-201ENST00000341697 TRBV20-1A0A075B6N2 111 aa14.71□□□□□ -0.05
SEMA6C-201ENST00000341697 LINC00173Q6ZV60 143 aa14.71□□□□□ -0.05
SEMA6C-201ENST00000341697 DLEU1O43261 78 aa14.71□□□□□ -0.06
SEMA6C-201ENST00000341697 C21orf62-AS1Q17RA5 79 aa14.71□□□□□ -0.06
SEMA6C-201ENST00000341697 COX11Q9Y6N1 276 aa14.71□□□□□ -0.06
SEMA6C-201ENST00000341697 FRMD6-AS1P0C7T7 363 aa14.7□□□□□ -0.06
SEMA6C-201ENST00000341697 IL17DQ8TAD2 202 aa14.7□□□□□ -0.06
SEMA6C-201ENST00000341697 CDK2AP2O75956 126 aa14.7□□□□□ -0.06
SEMA6C-201ENST00000341697 HIST2H2BDQ6DRA6 164 aa14.7□□□□□ -0.06
SEMA6C-201ENST00000341697 UBE2V1Q13404 147 aa14.7□□□□□ -0.06
SEMA6C-201ENST00000341697 BBC3Q96PG8 261 aaPredicted RBP14.7□□□□□ -0.06
SEMA6C-201ENST00000341697 PRSS47A8MTI9 375 aa14.69□□□□□ -0.06
SEMA6C-201ENST00000341697 LYRM9A8MSI8 78 aa14.69□□□□□ -0.06
SEMA6C-201ENST00000341697 IGLL5B9A064 214 aa14.69□□□□□ -0.06
SEMA6C-201ENST00000341697 IGLC6P0CF74 106 aa14.69□□□□□ -0.06
SEMA6C-201ENST00000341697 LINC01545Q5VT33 79 aa14.69□□□□□ -0.06
SEMA6C-201ENST00000341697 FAM222AQ5U5X8 452 aa14.69□□□□□ -0.06
SEMA6C-201ENST00000341697 BOD1L2Q8IYS8 172 aa14.69□□□□□ -0.06
SEMA6C-201ENST00000341697 BVES-AS1Q5T3Y7 98 aa14.69□□□□□ -0.06
SEMA6C-201ENST00000341697 TRAV12-1A0A0B4J245 112 aa14.68□□□□□ -0.06
SEMA6C-201ENST00000341697 ZNF124Q15973 351 aa14.68□□□□□ -0.06
SEMA6C-201ENST00000341697 SMR3AQ99954 134 aa14.68□□□□□ -0.06
SEMA6C-201ENST00000341697 TMEM126AQ9H061 195 aa14.68□□□□□ -0.06
SEMA6C-201ENST00000341697 PCP2Q8IVA1 136 aa14.68□□□□□ -0.06
SEMA6C-201ENST00000341697 A0A1B0GXF2 115 aa14.67□□□□□ -0.06
SEMA6C-201ENST00000341697 C18orf65Q6ZTR6 163 aa14.67□□□□□ -0.06
SEMA6C-201ENST00000341697 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.67□□□□□ -0.06
SEMA6C-201ENST00000341697 C20orf203Q8NBC4 194 aa14.67□□□□□ -0.06
SEMA6C-201ENST00000341697 C9orf118A6NHY6 69 aa14.67□□□□□ -0.06
SEMA6C-201ENST00000341697 UBE2BP63146 152 aa14.67□□□□□ -0.06
SEMA6C-201ENST00000341697 LINC00482Q8N8I6 264 aa14.67□□□□□ -0.06
SEMA6C-201ENST00000341697 KLK12Q9UKR0 248 aa14.67□□□□□ -0.06
SEMA6C-201ENST00000341697 BAALCQ8WXS3 180 aa14.66□□□□□ -0.06
SEMA6C-201ENST00000341697 SORL1Q92673 2214 aa14.66□□□□□ -0.06
SEMA6C-201ENST00000341697 HCFC1P51610 2035 aa14.66□□□□□ -0.06
SEMA6C-201ENST00000341697 ZFAND2AQ8N6M9 145 aa14.66□□□□□ -0.06
SEMA6C-201ENST00000341697 TM2D2Q9BX73 214 aa14.66□□□□□ -0.06
SEMA6C-201ENST00000341697 CPAMD8Q8IZJ3 1885 aa14.66□□□□□ -0.06
SEMA6C-201ENST00000341697 COX7B2Q8TF08 81 aa14.65□□□□□ -0.06
SEMA6C-201ENST00000341697 GDF5OSQ5U4N7 250 aa14.65□□□□□ -0.06
SEMA6C-201ENST00000341697 NDUFA7O95182 113 aa14.65□□□□□ -0.06
SEMA6C-201ENST00000341697 SPATA25Q9BR10 227 aa14.65□□□□□ -0.06
SEMA6C-201ENST00000341697 TRAV26-1A0A087WT03 109 aa14.65□□□□□ -0.07
SEMA6C-201ENST00000341697 RPL18AQ02543 176 aaKnown RBP14.65□□□□□ -0.07
SEMA6C-201ENST00000341697 ATG2AQ2TAZ0 1938 aa14.64□□□□□ -0.07
SEMA6C-201ENST00000341697 MIFP14174 115 aa14.63□□□□□ -0.07
SEMA6C-201ENST00000341697 GAGE2AQ6NT46 116 aa14.63□□□□□ -0.07
SEMA6C-201ENST00000341697 IFITM1P13164 125 aa14.62□□□□□ -0.07
SEMA6C-201ENST00000341697 EXPH5Q8NEV8 1989 aa14.62□□□□□ -0.07
SEMA6C-201ENST00000341697 P0DMU3 169 aa14.61□□□□□ -0.07
SEMA6C-201ENST00000341697 FAM231AP0DMU4 169 aa14.61□□□□□ -0.07
SEMA6C-201ENST00000341697 FAM231CP0DMU5 169 aa14.61□□□□□ -0.07
SEMA6C-201ENST00000341697 NDUFA1O15239 70 aa14.61□□□□□ -0.07
SEMA6C-201ENST00000341697 INAFM2P0DMQ5 153 aa14.61□□□□□ -0.07
SEMA6C-201ENST00000341697 TANC2Q9HCD6 1990 aa14.61□□□□□ -0.07
SEMA6C-201ENST00000341697 SOCS3O14543 225 aa14.61□□□□□ -0.07
SEMA6C-201ENST00000341697 ANKRD39Q53RE8 183 aa14.61□□□□□ -0.07
SEMA6C-201ENST00000341697 SIGMAR1Q99720 223 aa14.61□□□□□ -0.07
SEMA6C-201ENST00000341697 C12orf74Q32Q52 190 aa14.6□□□□□ -0.07
SEMA6C-201ENST00000341697 GAGE2EQ4V326 116 aa14.6□□□□□ -0.07
SEMA6C-201ENST00000341697 GAGE2DQ9UEU5 116 aa14.6□□□□□ -0.07
SEMA6C-201ENST00000341697 JMJD1CQ15652 2540 aa14.6□□□□□ -0.07
SEMA6C-201ENST00000341697 CRIP1P50238 77 aa14.6□□□□□ -0.07
SEMA6C-201ENST00000341697 K7ERJ3 54 aa14.6□□□□□ -0.07
SEMA6C-201ENST00000341697 USP9XQ93008 2570 aaPredicted RBP14.6□□□□□ -0.07
SEMA6C-201ENST00000341697 CCL25O15444 150 aa14.59□□□□□ -0.07
SEMA6C-201ENST00000341697 HIST1H4AP62805 103 aaKnown RBP14.58□□□□□ -0.07
SEMA6C-201ENST00000341697 TLN2Q9Y4G6 2542 aa14.58□□□□□ -0.08
SEMA6C-201ENST00000341697 CXCL5P42830 114 aa14.58□□□□□ -0.08
SEMA6C-201ENST00000341697 ADAMTS20P59510 1910 aa14.58□□□□□ -0.08
SEMA6C-201ENST00000341697 DEFB131BA0A096LNP1 70 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms