RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 NIT1Q86X76 327 aa9.77□□□□□ -0.85
ERCC1-203ENST00000340192 URGCP-MRPS24S4R325 110 aa9.77□□□□□ -0.85
ERCC1-203ENST00000340192 MGPP08493 103 aa9.76□□□□□ -0.85
ERCC1-203ENST00000340192 NTF3P20783 257 aa9.76□□□□□ -0.85
ERCC1-203ENST00000340192 CTRLP40313 264 aa9.76□□□□□ -0.85
ERCC1-203ENST00000340192 CDPF1Q6NVV7 123 aa9.76□□□□□ -0.85
ERCC1-203ENST00000340192 FAM210AQ96ND0 272 aa9.76□□□□□ -0.85
ERCC1-203ENST00000340192 APOBP04114 4563 aaKnown RBP9.76□□□□□ -0.85
ERCC1-203ENST00000340192 TRBV6-8A0A0A6YYG3 113 aa9.75□□□□□ -0.85
ERCC1-203ENST00000340192 LRCOL1A6NCL2 159 aa9.75□□□□□ -0.85
ERCC1-203ENST00000340192 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.75□□□□□ -0.85
ERCC1-203ENST00000340192 A0A087WX48 190 aa9.74□□□□□ -0.85
ERCC1-203ENST00000340192 TRAV8-3A0A0A6YYJ7 113 aa9.74□□□□□ -0.85
ERCC1-203ENST00000340192 M0QY20 66 aa9.74□□□□□ -0.85
ERCC1-203ENST00000340192 TRGC1P0CF51 173 aa9.74□□□□□ -0.85
ERCC1-203ENST00000340192 SUMO4Q6EEV6 95 aa9.74□□□□□ -0.85
ERCC1-203ENST00000340192 WDR73Q6P4I2 378 aa9.74□□□□□ -0.85
ERCC1-203ENST00000340192 TM2D2Q9BX73 214 aa9.74□□□□□ -0.85
ERCC1-203ENST00000340192 H7C1H1 209 aa9.73□□□□□ -0.85
ERCC1-203ENST00000340192 TWIST1Q15672 202 aa9.73□□□□□ -0.85
ERCC1-203ENST00000340192 KCNIP4Q6PIL6 250 aa9.73□□□□□ -0.85
ERCC1-203ENST00000340192 GTSF1Q8WW33 167 aa9.73□□□□□ -0.85
ERCC1-203ENST00000340192 SMIM7Q9BQ49 75 aa9.73□□□□□ -0.85
ERCC1-203ENST00000340192 CHCHD7Q9BUK0 85 aa9.73□□□□□ -0.85
ERCC1-203ENST00000340192 CNFNQ9BYD5 112 aa9.73□□□□□ -0.85
ERCC1-203ENST00000340192 DPH3P1Q9H4G8 78 aa9.73□□□□□ -0.85
ERCC1-203ENST00000340192 KLK12Q9UKR0 248 aa9.73□□□□□ -0.85
ERCC1-203ENST00000340192 GATCO43716 136 aaKnown RBP9.72□□□□□ -0.85
ERCC1-203ENST00000340192 NDUFS6O75380 124 aaKnown RBP9.72□□□□□ -0.85
ERCC1-203ENST00000340192 SRP19P09132 144 aaKnown RBP9.72□□□□□ -0.85
ERCC1-203ENST00000340192 NTM-AS1Q6ZSK4 140 aa9.72□□□□□ -0.85
ERCC1-203ENST00000340192 FAM231DQ6ZW35 169 aa9.72□□□□□ -0.85
ERCC1-203ENST00000340192 DNAJC30Q96LL9 226 aa9.72□□□□□ -0.85
ERCC1-203ENST00000340192 TMEM262E9PQX1 116 aa9.71□□□□□ -0.86
ERCC1-203ENST00000340192 Q8N814 137 aa9.71□□□□□ -0.86
ERCC1-203ENST00000340192 CHCHD5Q9BSY4 110 aa9.71□□□□□ -0.86
ERCC1-203ENST00000340192 ZNF727A8MUV8 499 aa9.7□□□□□ -0.86
ERCC1-203ENST00000340192 ELOBQ15370 118 aa9.7□□□□□ -0.86
ERCC1-203ENST00000340192 MPV17L2Q567V2 206 aa9.7□□□□□ -0.86
ERCC1-203ENST00000340192 TMEM97Q5BJF2 176 aa9.7□□□□□ -0.86
ERCC1-203ENST00000340192 RASL11AQ6T310 242 aa9.7□□□□□ -0.86
ERCC1-203ENST00000340192 TEX261Q6UWH6 196 aa9.7□□□□□ -0.86
ERCC1-203ENST00000340192 LINC01551Q86U37 167 aa9.7□□□□□ -0.86
ERCC1-203ENST00000340192 MAPKAPK5-AS1Q8N8E1 139 aa9.7□□□□□ -0.86
ERCC1-203ENST00000340192 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
ERCC1-203ENST00000340192 IGLV5-52A0A0A0MRZ9 124 aa9.69□□□□□ -0.86
ERCC1-203ENST00000340192 A8MWL6 223 aa9.69□□□□□ -0.86
ERCC1-203ENST00000340192 KRTAP10-1P60331 282 aa9.69□□□□□ -0.86
ERCC1-203ENST00000340192 WFDC2Q14508 124 aa9.69□□□□□ -0.86
ERCC1-203ENST00000340192 NTN5Q8WTR8 489 aaPredicted RBP9.69□□□□□ -0.86
ERCC1-203ENST00000340192 RMI2Q96E14 147 aa9.69□□□□□ -0.86
ERCC1-203ENST00000340192 NIT2Q9NQR4 276 aa9.69□□□□□ -0.86
ERCC1-203ENST00000340192 COX11Q9Y6N1 276 aa9.69□□□□□ -0.86
ERCC1-203ENST00000340192 TRBV25-1A0A075B6N4 114 aa9.68□□□□□ -0.86
ERCC1-203ENST00000340192 IGKV2D-24A0A075B6R9 120 aa9.68□□□□□ -0.86
ERCC1-203ENST00000340192 LECT2O14960 151 aa9.68□□□□□ -0.86
ERCC1-203ENST00000340192 GCSHP23434 173 aa9.68□□□□□ -0.86
ERCC1-203ENST00000340192 PKIAP61925 76 aa9.68□□□□□ -0.86
ERCC1-203ENST00000340192 CT83Q5H943 113 aa9.68□□□□□ -0.86
ERCC1-203ENST00000340192 C15orf54Q8N8G6 183 aa9.68□□□□□ -0.86
ERCC1-203ENST00000340192 PGLYRP4Q96LB8 373 aa9.68□□□□□ -0.86
ERCC1-203ENST00000340192 KRTAP4-5Q9BYR2 181 aa9.68□□□□□ -0.86
ERCC1-203ENST00000340192 TRAV26-2A0A0B4J265 109 aa9.67□□□□□ -0.86
ERCC1-203ENST00000340192 ANGP03950 147 aaKnown RBP9.67□□□□□ -0.86
ERCC1-203ENST00000340192 FOXA3P55318 350 aaPredicted RBP9.67□□□□□ -0.86
ERCC1-203ENST00000340192 Q0VG73 95 aa9.67□□□□□ -0.86
ERCC1-203ENST00000340192 IQCJQ1A5X6 159 aa9.67□□□□□ -0.86
ERCC1-203ENST00000340192 Q8N976 141 aa9.67□□□□□ -0.86
ERCC1-203ENST00000340192 IGHV1-24A0A0C4DH33 117 aa9.66□□□□□ -0.86
ERCC1-203ENST00000340192 C9JQL5 133 aa9.66□□□□□ -0.86
ERCC1-203ENST00000340192 GAGE6Q13070 117 aa9.66□□□□□ -0.86
ERCC1-203ENST00000340192 ATRAIDQ6UW56 229 aa9.66□□□□□ -0.86
ERCC1-203ENST00000340192 ENHOQ6UWT2 76 aa9.66□□□□□ -0.86
ERCC1-203ENST00000340192 SMIM15Q7Z3B0 74 aa9.66□□□□□ -0.86
ERCC1-203ENST00000340192 GATD1Q8NB37 220 aa9.66□□□□□ -0.86
ERCC1-203ENST00000340192 BAALCQ8WXS3 180 aa9.66□□□□□ -0.86
ERCC1-203ENST00000340192 OSTCQ9NRP0 149 aa9.66□□□□□ -0.86
ERCC1-203ENST00000340192 CRPP02741 224 aa9.65□□□□□ -0.86
ERCC1-203ENST00000340192 RBX1P62877 108 aa9.65□□□□□ -0.86
ERCC1-203ENST00000340192 SRSF3P84103 164 aaKnown RBP9.65□□□□□ -0.86
ERCC1-203ENST00000340192 TMEM241Q24JQ0 296 aa9.65□□□□□ -0.86
ERCC1-203ENST00000340192 FAM74A3Q4VXF1 159 aa9.65□□□□□ -0.86
ERCC1-203ENST00000340192 Q8N1X5 172 aa9.65□□□□□ -0.86
ERCC1-203ENST00000340192 DEFB104AQ8WTQ1 72 aa9.65□□□□□ -0.86
ERCC1-203ENST00000340192 TSKUQ8WUA8 353 aa9.65□□□□□ -0.86
ERCC1-203ENST00000340192 ABCA13Q86UQ4 5058 aa9.65□□□□□ -0.87
ERCC1-203ENST00000340192 HIGD1CA8MV81 97 aa9.64□□□□□ -0.87
ERCC1-203ENST00000340192 FRZBQ92765 325 aa9.64□□□□□ -0.87
ERCC1-203ENST00000340192 ISOC2Q96AB3 205 aa9.64□□□□□ -0.87
ERCC1-203ENST00000340192 BORCS7Q96B45 105 aa9.64□□□□□ -0.87
ERCC1-203ENST00000340192 C1orf43Q9BWL3 253 aa9.64□□□□□ -0.87
ERCC1-203ENST00000340192 GFRA4Q9GZZ7 299 aa9.64□□□□□ -0.87
ERCC1-203ENST00000340192 FAM231BA6NCW3 169 aa9.63□□□□□ -0.87
ERCC1-203ENST00000340192 XGP55808 180 aa9.63□□□□□ -0.87
ERCC1-203ENST00000340192 RPL23P62829 140 aaKnown RBP9.63□□□□□ -0.87
ERCC1-203ENST00000340192 PEA15Q15121 130 aa9.63□□□□□ -0.87
ERCC1-203ENST00000340192 RPL39LQ96EH5 51 aaKnown RBP9.63□□□□□ -0.87
ERCC1-203ENST00000340192 TMEM243Q9BU79 118 aa9.63□□□□□ -0.87
ERCC1-203ENST00000340192 V9GYV3 84 aa9.63□□□□□ -0.87
ERCC1-203ENST00000340192 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms